Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold35G14135 Striga asiatica HOM05D003057 ORTHO05D012636 6.7e-105 384.0 196 100.0
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 4.1e-70 268.5 196 75.5
SGA_v2.0_scaffold116G32300 Striga asiatica HOM05D003057 ORTHO05D012636 1.7e-68 263.1 209 68.9
SGA_v2.0_scaffold295G47505 Striga asiatica HOM05D003057 ORTHO05D012636 3.3e-59 232.3 196 65.3
SGA_v2.0_scaffold57G20118 Striga asiatica HOM05D003057 ORTHO05D012636 3.5e-53 212.2 169 68.0
SGA_v2.0_scaffold306G48017 Striga asiatica HOM05D003057 ORTHO05D012636 1.4e-49 200.3 164 68.9
SGA_v2.0_scaffold216G42382 Striga asiatica HOM05D003057 ORTHO05D012636 1.2e-48 197.2 138 72.5
SGA_v2.0_scaffold21G09540 Striga asiatica HOM05D003057 ORTHO05D012636 4.4e-48 195.3 210 58.1
SGA_v2.0_scaffold165G38202 Striga asiatica HOM05D003057 ORTHO05D012636 1.1e-46 190.7 158 66.5
SGA_v2.0_scaffold1179G53858 Striga asiatica HOM05D003057 ORTHO05D012636 4.8e-42 175.3 142 71.1
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 2.9e-39 166.0 181 55.8
SGA_v2.0_scaffold10G05322 Striga asiatica HOM05D003057 ORTHO05D012636 4.2e-38 162.2 111 79.3
SGA_v2.0_scaffold10G05245 Striga asiatica HOM05D003057 ORTHO05D012636 8.4e-31 137.9 131 60.3
SGA_v2.0_scaffold77G25207 Striga asiatica HOM05D000001 ORTHO05D000003 3.7e-26 122.5 112 61.6
SGA_v2.0_scaffold165G38204 Striga asiatica HOM05D003057 ORTHO05D012636 4.5e-24 115.5 112 58.9
SGA_v2.0_scaffold17G08076 Striga asiatica HOM05D003057 ORTHO05D012636 5.8e-24 115.2 115 57.4
SGA_v2.0_scaffold26G11423 Striga asiatica HOM05D003057 ORTHO05D012636 1.7e-23 113.6 138 52.2
SGA_v2.0_scaffold17G08167 Striga asiatica HOM05D003057 ORTHO05D012636 3.8e-23 112.5 110 60.9
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 5.1e-12 75.5 151 33.8
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 1.5e-11 73.9 96 41.7
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 3.3e-11 72.8 179 33.5
Psat6g164240 Pisum sativum HOM05D003057 ORTHO05D003904 1.3e-10 70.9 89 44.9
Psat7g039600 Pisum sativum HOM05D003057 ORTHO05D003904 1.3e-10 70.9 89 44.9
Psat7g220920 Pisum sativum HOM05D003057 ORTHO05D003904 1.3e-10 70.9 88 46.6
Sp3g10110 Schrenkiella parvula HOM05D036201 ORTHO05D012636 1.3e-10 70.9 72 51.4
Psat6g044720 Pisum sativum HOM05D003057 ORTHO05D003904 1.8e-09 67.0 85 45.9
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.4e-08 62.8 86 36.0
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.9e-08 62.0 88 35.2
COL.COLO4_06538 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.0e-07 61.2 88 38.6
SGA_v2.0_scaffold10G05324 Striga asiatica HOM05D003057 ORTHO05D012636 2.9e-07 59.7 39 74.4
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 5.0e-07 58.9 156 31.4
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 6.5e-07 58.5 73 42.5
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.5e-07 58.2 81 42.0
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.5e-07 58.2 81 42.0
PSO675G6041 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-06 57.8 80 41.2
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-06 57.8 81 42.0
Psat0s1492g0080 Pisum sativum HOM05D003057 ORTHO05D012636 1.4e-06 57.4 67 46.3
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.2e-06 56.2 92 37.0
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.5e-06 55.5 79 38.0
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.2e-06 55.1 85 37.6
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 7.2e-06 55.1 87 37.9
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 9.4e-06 54.7 92 34.8


User provided reference genes

Program Settings