Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold35G14127 Striga asiatica HOM05D006167 ORTHO05D007635 1.7e-57 225.7 106 100.0
SGA_v2.0_scaffold189G40388 Striga asiatica HOM05D006167 ORTHO05D007635 4.4e-42 174.5 107 82.2
SalBow3G0251 Salvia bowleyana HOM05D006167 ORTHO05D007635 5.4e-24 114.4 66 83.3
SalBow3G4531 Salvia bowleyana HOM05D006167 ORTHO05D007635 5.4e-24 114.4 66 83.3
SalBow5G0916 Salvia bowleyana HOM05D006167 ORTHO05D007635 7.0e-24 114.0 65 83.1
SalBow5G2020 Salvia bowleyana HOM05D006167 ORTHO05D007635 7.0e-24 114.0 65 83.1
SalBow5G4407 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.6e-23 112.8 66 81.8
SalBow5G4759 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.6e-23 112.8 66 81.8
Migut.N00323 Erythranthe guttata HOM05D006167 ORTHO05D007635 1.0e-22 110.2 66 80.3
unitig_744.g24610 Utricularia gibba HOM05D006167 ORTHO05D007635 1.1e-16 90.1 61 73.8
Migut.M01352 Erythranthe guttata HOM05D006167 ORTHO05D007635 3.3e-13 78.6 68 63.2
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 2.8e-12 75.5 67 61.2
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.1e-11 73.6 65 56.9
Cc03_g06850 Coffea canephora HOM05D006167 ORTHO05D007635 1.5e-10 69.7 70 57.1
HanXRQChr13g0410431 Helianthus annuus HOM05D006167 ORTHO05D007635 2.0e-10 69.3 68 55.9
Lsat_1_v5_gn_1_76160 Lactuca sativa HOM05D006167 ORTHO05D007635 5.8e-10 67.8 63 58.7
DCAR_027359 Daucus carota HOM05D006167 ORTHO05D007635 7.6e-10 67.4 64 59.4
Peaxi162Scf01007g00005 Petunia axillaris HOM05D006167 ORTHO05D007635 9.9e-10 67.0 72 52.8
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 1.7e-09 66.2 79 41.8
CAN.G566.4 Capsicum annuum HOM05D006167 ORTHO05D007635 1.7e-09 66.2 69 55.1
Solyc12g097040.1 Solanum lycopersicum HOM05D006167 ORTHO05D007635 2.2e-09 65.9 68 55.9
Hma1.2p1_0014F.1_g009760 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 3.8e-09 65.1 61 52.5
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 4.9e-09 64.7 70 50.0
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 6.4e-09 64.3 66 53.0
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 6.4e-09 64.3 61 59.0
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 8.4e-09 63.9 66 53.0
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 8.4e-09 63.9 66 53.0
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 1.1e-08 63.5 66 51.5
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 1.1e-08 63.5 66 51.5
Dinv18834 Davidia involucrata HOM05D006167 ORTHO05D007635 1.1e-08 63.5 66 51.5
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 1.4e-08 63.2 66 54.5
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 1.4e-08 63.2 66 51.5
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 1.4e-08 63.2 66 53.0
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 1.4e-08 63.2 66 54.5
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.9e-08 62.8 61 54.1
Rhsim09G0043900 Rhododendron simsii HOM05D006167 ORTHO05D007635 1.9e-08 62.8 62 54.8
ECA248G1405 Erigeron canadensis HOM05D006167 ORTHO05D007635 3.2e-08 62.0 78 48.7
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 3.2e-08 62.0 67 53.7
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 3.2e-08 62.0 66 53.0
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 4.1e-08 61.6 66 51.5
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 7.1e-08 60.8 66 50.0
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 1.2e-07 60.1 67 53.7
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 1.2e-07 60.1 61 50.8
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 1.6e-07 59.7 61 54.1
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 2.1e-07 59.3 66 48.5
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 2.1e-07 59.3 66 48.5
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 2.7e-07 58.9 66 48.5
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 3.5e-07 58.5 61 50.8
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 3.5e-07 58.5 66 48.5
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 3.5e-07 58.5 72 50.0
TPR.G23974 Trifolium pratense HOM05D006167 ORTHO05D007635 3.5e-07 58.5 69 55.1
vmacro15491 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 4.6e-07 58.2 52 53.8
vmacro22827 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 4.6e-07 58.2 52 53.8
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 6.0e-07 57.8 66 48.5
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 6.0e-07 57.8 66 48.5
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 7.8e-07 57.4 70 50.0
Lsat_1_v5_gn_2_42001 Lactuca sativa HOM05D006167 ORTHO05D007635 1.3e-06 56.6 68 48.5
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 1.3e-06 56.6 49 63.3
Ca_00011_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 2.3e-06 55.8 61 47.5
Ca_26216_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 2.3e-06 55.8 61 47.5
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 2.3e-06 55.8 66 47.0
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 2.3e-06 55.8 66 47.0
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 2.3e-06 55.8 66 47.0
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 5.1e-06 54.7 66 45.5


User provided reference genes

Program Settings