Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 5.8e-141 504.2 254 100.0
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 2.3e-33 146.7 79 88.6
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 5.4e-30 135.6 79 81.0
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 5.4e-30 135.6 79 81.0
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 1.6e-29 134.0 80 81.2
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 2.1e-29 133.7 79 78.5
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 3.5e-29 132.9 77 80.5
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 4.6e-29 132.5 79 77.2
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 4.6e-29 132.5 79 77.2
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 6.0e-29 132.1 79 78.5
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 7.8e-29 131.7 79 78.5
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 7.8e-29 131.7 79 75.9
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 1.0e-28 131.3 84 72.6
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 1.3e-28 131.0 79 75.9
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 1.3e-28 131.0 79 77.2
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 1.7e-28 130.6 79 78.5
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 1.7e-28 130.6 79 75.9
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 2.3e-28 130.2 79 75.9
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 3.0e-28 129.8 79 77.2
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 3.0e-28 129.8 79 73.4
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 3.0e-28 129.8 79 72.2
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 3.0e-28 129.8 79 73.4
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 3.9e-28 129.4 79 74.7
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 3.9e-28 129.4 79 75.9
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 5.1e-28 129.0 79 75.9
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 6.6e-28 128.6 81 72.8
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 6.6e-28 128.6 81 72.8
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 6.6e-28 128.6 81 75.3
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 1.1e-27 127.9 104 60.6
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 1.1e-27 127.9 79 73.4
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.1e-27 127.9 79 74.7
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 1.5e-27 127.5 79 72.2
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 1.9e-27 127.1 104 59.6
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 1.9e-27 127.1 79 74.7
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 1.9e-27 127.1 79 75.9
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 2.5e-27 126.7 100 62.0
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 2.5e-27 126.7 79 74.7
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 2.5e-27 126.7 79 73.4
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 2.5e-27 126.7 79 73.4
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 3.3e-27 126.3 79 74.7
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 3.3e-27 126.3 124 55.6
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 3.3e-27 126.3 79 73.4
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 3.3e-27 126.3 79 73.4
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 3.3e-27 126.3 79 72.2
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 3.3e-27 126.3 79 73.4
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 3.3e-27 126.3 96 61.5
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 4.3e-27 125.9 105 60.0
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 4.3e-27 125.9 84 67.9
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 4.3e-27 125.9 79 73.4
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 5.6e-27 125.6 79 73.4
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 5.6e-27 125.6 94 63.8
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 5.6e-27 125.6 79 74.7
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 7.3e-27 125.2 79 73.4
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 7.3e-27 125.2 79 72.2
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 7.3e-27 125.2 79 72.2
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 7.3e-27 125.2 79 70.9
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 9.6e-27 124.8 79 70.9
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 9.6e-27 124.8 79 74.7
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 9.6e-27 124.8 79 72.2
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.2e-26 124.4 79 69.6
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.2e-26 124.4 79 72.2
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 1.2e-26 124.4 79 73.4
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 1.2e-26 124.4 79 73.4
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 1.2e-26 124.4 79 69.6
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.2e-26 124.4 79 72.2
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 1.2e-26 124.4 79 72.2
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 1.2e-26 124.4 79 73.4
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 1.6e-26 124.0 79 72.2
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 1.6e-26 124.0 81 75.3
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 1.6e-26 124.0 79 70.9
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 1.6e-26 124.0 81 69.1
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 2.1e-26 123.6 79 69.6
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 2.1e-26 123.6 96 63.5
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 2.1e-26 123.6 79 72.2
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 2.1e-26 123.6 79 72.2
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 2.1e-26 123.6 79 72.2
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 2.1e-26 123.6 79 72.2
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.1e-26 123.6 79 72.2
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 2.1e-26 123.6 79 72.2
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 2.1e-26 123.6 79 70.9
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 2.1e-26 123.6 79 72.2
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 2.8e-26 123.2 79 72.2
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 2.8e-26 123.2 79 70.9
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 2.8e-26 123.2 79 70.9
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 2.8e-26 123.2 79 72.2
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 2.8e-26 123.2 79 72.2
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 2.8e-26 123.2 120 53.3
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 2.8e-26 123.2 79 69.6
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 3.6e-26 122.9 81 69.1
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 3.6e-26 122.9 79 70.9
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 3.6e-26 122.9 79 70.9
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 4.7e-26 122.5 79 70.9
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 4.7e-26 122.5 79 69.6
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 4.7e-26 122.5 79 70.9
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 6.2e-26 122.1 79 70.9
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 6.2e-26 122.1 79 70.9
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 6.2e-26 122.1 79 70.9
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 1.1e-25 121.3 79 69.6
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 1.4e-25 120.9 79 72.2
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 1.4e-25 120.9 79 68.4
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.4e-25 120.9 79 68.4
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.4e-25 120.9 79 70.9
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.4e-25 120.9 79 70.9
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 1.4e-25 120.9 79 70.9
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 1.8e-25 120.6 79 70.9
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 2.4e-25 120.2 88 62.5
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 2.4e-25 120.2 98 60.2
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 3.1e-25 119.8 79 68.4
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 3.1e-25 119.8 143 45.5
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 4.0e-25 119.4 79 67.1
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 4.0e-25 119.4 79 67.1
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 4.0e-25 119.4 79 67.1
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 5.2e-25 119.0 79 69.6
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 6.9e-25 118.6 79 65.8
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 2.6e-24 116.7 79 67.1
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 4.4e-24 115.9 101 54.5
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 7.6e-24 115.2 74 70.3
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 6.4e-23 112.1 101 59.4
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 1.9e-22 110.5 71 70.4
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 4.6e-21 105.9 79 65.8
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 3.0e-20 103.2 83 60.2
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 4.3e-19 99.4 66 66.7
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 9.6e-19 98.2 67 67.2
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 1.5e-16 90.9 83 53.0
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 6.4e-15 85.5 79 53.2
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 1.6e-13 80.9 64 57.8
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 3.3e-11 73.2 95 41.1
SGA_v2.0_scaffold35G14052 Striga asiatica HOM05D006006 ORTHO05D404979 6.9e-09 65.5 51 70.6


User provided reference genes

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