Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 6.3e-131 470.7 224 100.0
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 6.2e-46 188.3 205 48.8
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 4.0e-45 185.7 258 43.4
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 3.0e-40 169.5 259 39.4
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 1.6e-38 163.7 278 37.8
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 3.2e-34 149.4 257 39.7
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 7.1e-34 148.3 146 53.4
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 1.8e-32 143.7 242 39.3
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 2.1e-30 136.7 249 35.7
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 3.7e-30 136.0 236 38.1
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.8e-29 133.7 248 36.7
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 6.9e-29 131.7 224 35.7
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 1.5e-28 130.6 224 35.7
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.5e-28 130.6 244 34.4
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 2.0e-28 130.2 226 33.6
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 2.0e-28 130.2 238 33.6
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 2.0e-28 130.2 243 34.2
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 4.5e-28 129.0 238 33.6
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 2.9e-27 126.3 242 36.0
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 1.1e-26 124.4 217 35.5
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.4e-26 124.0 242 34.7
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 1.4e-26 124.0 217 35.5
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 5.5e-26 122.1 232 33.6
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 9.3e-26 121.3 223 34.5
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 9.3e-26 121.3 226 32.3
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 9.3e-26 121.3 231 35.5
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 1.2e-25 120.9 228 36.8
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 2.1e-25 120.2 236 33.5
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 1.3e-24 117.5 210 34.3
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 1.8e-24 117.1 246 32.5
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 2.3e-24 116.7 231 33.8
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 3.9e-24 115.9 137 45.3
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 6.7e-24 115.2 251 31.5
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 8.7e-24 114.8 223 33.2
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 8.7e-24 114.8 251 31.5
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 2.5e-23 113.2 202 35.6
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 5.7e-23 112.1 235 33.2
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 7.4e-23 111.7 246 32.9
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 7.4e-23 111.7 234 34.2
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 9.6e-23 111.3 236 32.2
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.6e-22 110.5 236 33.1
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 2.1e-22 110.2 235 32.3
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 2.1e-22 110.2 235 31.9
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 2.1e-22 110.2 231 31.2
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 2.8e-22 109.8 216 33.8
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 6.3e-22 108.6 209 35.4
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 6.3e-22 108.6 249 31.7
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 8.2e-22 108.2 235 31.9
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 8.2e-22 108.2 267 30.0
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 1.1e-21 107.8 140 41.4
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 3.1e-21 106.3 236 32.6
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 4.1e-21 105.9 159 39.0
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 4.1e-21 105.9 204 32.4
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 7.6e-20 101.7 240 31.2
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 1.0e-19 101.3 242 31.0
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 2.2e-19 100.1 250 30.4
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 3.2e-18 96.3 239 26.8
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 3.2e-18 96.3 218 30.7
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 7.2e-18 95.1 238 29.4
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 9.3e-18 94.7 243 30.5
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 1.2e-17 94.4 245 30.2
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 2.1e-17 93.6 228 28.5
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 2.1e-17 93.6 248 29.0
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 7.9e-17 91.7 236 28.8
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 7.9e-17 91.7 102 44.1
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 1.3e-16 90.9 238 28.2
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 8.7e-16 88.2 217 27.2
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 1.9e-15 87.0 120 40.8
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 4.3e-15 85.9 231 27.7
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 4.3e-15 85.9 254 28.0
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 5.7e-15 85.5 227 28.6
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 9.7e-15 84.7 203 31.0
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 9.7e-15 84.7 214 27.6
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 9.7e-15 84.7 246 26.0
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 1.6e-14 84.0 240 28.8
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 2.2e-14 83.6 227 27.3
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 3.7e-14 82.8 86 46.5
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 6.3e-14 82.0 226 24.8
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 8.2e-14 81.6 217 28.6
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 1.8e-13 80.5 221 27.6
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 9.0e-13 78.2 216 28.2
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 1.2e-12 77.8 237 28.3
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 1.5e-12 77.4 215 27.0
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 4.5e-12 75.9 236 26.7
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 7.7e-12 75.1 218 30.3
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.0e-11 74.7 95 41.1
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.3e-11 74.3 109 43.1
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 2.2e-11 73.6 110 38.2
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 8.5e-11 71.6 224 27.2
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 1.4e-10 70.9 108 39.8
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 4.2e-10 69.3 86 38.4
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 4.2e-10 69.3 86 38.4
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 1.6e-09 67.4 110 38.2
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 6.1e-09 65.5 82 37.8
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 1.0e-08 64.7 249 25.3
ECA233G1347 Erigeron canadensis HOM05D007097 ORTHO05D008131 1.8e-08 63.9 96 35.4
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 8.8e-08 61.6 49 51.0
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 1.5e-07 60.8 110 34.5
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 9.7e-07 58.2 94 33.0
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 3.7e-06 56.2 233 23.2
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 6.3e-06 55.5 101 32.7
SEGI_18590 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 8.2e-06 55.1 98 31.6


User provided reference genes

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