Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 3.5e-130 468.4 249 100.0
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.0e-49 201.1 170 65.3
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 3.0e-49 199.5 171 70.8
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.0e-49 199.5 173 64.2
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 3.9e-49 199.1 170 63.5
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 6.7e-49 198.4 173 63.6
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 1.5e-48 197.2 173 65.9
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 1.5e-48 197.2 170 65.3
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 1.9e-48 196.8 170 65.3
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 1.9e-48 196.8 170 65.3
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 2.5e-48 196.4 169 66.3
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 2.5e-48 196.4 166 65.1
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 5.6e-48 195.3 170 64.7
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 7.4e-48 194.9 172 66.3
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 9.6e-48 194.5 169 65.1
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 1.3e-47 194.1 169 67.5
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 2.1e-47 193.4 172 66.3
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 2.1e-47 193.4 170 65.3
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 2.8e-47 193.0 171 62.0
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 3.7e-47 192.6 171 64.9
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 4.8e-47 192.2 182 61.5
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 6.2e-47 191.8 168 71.4
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.8e-46 190.3 171 64.3
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.8e-46 190.3 171 64.3
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 2.4e-46 189.9 170 68.8
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 2.4e-46 189.9 172 64.0
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 4.0e-46 189.1 168 65.5
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 5.3e-46 188.7 173 64.2
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 5.3e-46 188.7 172 63.4
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 6.9e-46 188.3 170 67.1
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 9.0e-46 188.0 174 64.4
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.2e-45 187.6 176 64.2
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 1.2e-45 187.6 171 63.2
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 2.0e-45 186.8 172 64.0
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 2.6e-45 186.4 170 64.7
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 2.6e-45 186.4 174 63.8
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 3.4e-45 186.0 170 62.4
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 4.5e-45 185.7 173 66.5
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 4.5e-45 185.7 171 68.4
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 5.8e-45 185.3 172 62.2
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 7.6e-45 184.9 172 66.3
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.3e-44 184.1 172 63.4
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 1.7e-44 183.7 171 60.2
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 2.2e-44 183.3 170 64.1
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 3.8e-44 182.6 177 66.7
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 4.9e-44 182.2 121 81.0
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 4.9e-44 182.2 171 62.6
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 6.5e-44 181.8 173 60.1
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 8.4e-44 181.4 174 62.1
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 8.4e-44 181.4 171 67.3
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 1.4e-43 180.6 172 61.6
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.4e-43 180.6 175 61.7
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.4e-43 180.6 170 67.1
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 1.4e-43 180.6 173 59.5
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 1.9e-43 180.3 176 63.6
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 1.9e-43 180.3 176 66.5
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 1.9e-43 180.3 182 60.4
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 2.5e-43 179.9 160 61.9
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 2.5e-43 179.9 170 63.5
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 3.2e-43 179.5 172 59.9
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 3.2e-43 179.5 176 60.2
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 3.2e-43 179.5 187 58.8
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 5.5e-43 178.7 172 59.3
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 5.5e-43 178.7 174 64.4
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 5.5e-43 178.7 173 64.7
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 5.5e-43 178.7 170 59.4
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 7.1e-43 178.3 172 58.7
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 7.1e-43 178.3 175 60.6
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 9.3e-43 177.9 160 60.6
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 9.3e-43 177.9 173 61.3
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.2e-42 177.6 175 59.4
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.2e-42 177.6 123 77.2
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 1.6e-42 177.2 166 59.0
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.6e-42 177.2 174 64.4
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 2.1e-42 176.8 174 66.1
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 2.1e-42 176.8 167 64.7
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.1e-42 176.8 175 63.4
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 2.7e-42 176.4 175 61.1
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 2.7e-42 176.4 130 74.6
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 3.5e-42 176.0 173 59.0
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 3.5e-42 176.0 173 59.0
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 3.5e-42 176.0 175 63.4
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 3.5e-42 176.0 176 59.7
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 3.5e-42 176.0 160 62.5
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.5e-42 176.0 163 63.2
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 6.0e-42 175.3 169 68.0
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 6.0e-42 175.3 172 59.9
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 7.9e-42 174.9 171 61.4
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 1.3e-41 174.1 167 66.5
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.3e-41 174.1 169 67.5
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 1.8e-41 173.7 170 59.4
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 2.3e-41 173.3 173 58.4
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 2.3e-41 173.3 110 80.0
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 3.0e-41 172.9 175 60.0
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 3.0e-41 172.9 167 58.1
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 3.0e-41 172.9 172 59.9
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.0e-41 172.9 172 59.9
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 3.9e-41 172.6 169 58.0
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 5.1e-41 172.2 118 78.0
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 1.1e-40 171.0 176 57.4
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 1.1e-40 171.0 176 57.4
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.1e-40 171.0 172 60.5
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.5e-40 170.6 172 60.5
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 1.5e-40 170.6 125 73.6
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 1.9e-40 170.2 177 58.2
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.3e-40 169.5 172 60.5
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 3.3e-40 169.5 98 87.8
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.3e-40 169.5 114 75.4
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 5.7e-40 168.7 118 72.0
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 7.4e-40 168.3 179 57.0
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 1.3e-39 167.5 171 64.3
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 2.2e-39 166.8 160 62.5
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 1.2e-37 161.0 158 58.2
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.4e-33 147.5 168 54.8
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 2.3e-33 146.7 131 59.5
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 6.3e-31 138.7 141 58.2
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 1.2e-29 134.4 80 80.0
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.3e-28 131.0 110 60.0
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 1.4e-27 127.5 134 53.7
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.9e-27 127.1 110 57.3
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 5.5e-27 125.6 106 62.3
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.6e-26 124.0 146 52.7
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 6.1e-26 122.1 177 44.6
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 1.3e-20 104.4 176 42.0
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 3.8e-20 102.8 131 51.1
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 5.0e-20 102.4 127 44.9
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 3.7e-15 86.3 143 46.2
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 1.1e-14 84.7 170 42.4
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 7.0e-06 55.5 98 29.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 7.0e-06 55.5 98 29.6
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 9.1e-06 55.1 100 29.0


User provided reference genes

Program Settings