Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 1.8e-72 275.8 138 100.0
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 4.8e-65 251.1 132 93.9
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 1.5e-50 203.0 133 73.7
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 2.8e-49 198.7 123 77.2
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 8.2e-49 197.2 131 72.5
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 2.6e-47 192.2 133 72.9
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 3.5e-47 191.8 133 69.2
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 7.7e-47 190.7 122 76.2
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.3e-46 189.9 138 70.3
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.1e-45 186.8 130 69.2
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 1.1e-45 186.8 130 69.2
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.5e-45 186.4 130 69.2
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 2.5e-45 185.7 131 67.9
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 5.5e-45 184.5 123 69.9
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 5.5e-45 184.5 131 68.7
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 7.2e-45 184.1 133 66.2
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 9.4e-45 183.7 160 61.2
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 1.6e-44 183.0 137 62.8
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 2.1e-44 182.6 133 66.2
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 2.7e-44 182.2 131 66.4
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 4.7e-44 181.4 130 66.2
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 6.1e-44 181.0 118 73.7
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 1.4e-43 179.9 108 78.7
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 1.4e-43 179.9 121 72.7
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.8e-43 179.5 113 73.5
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.8e-43 179.5 128 68.0
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 3.0e-43 178.7 108 78.7
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 4.0e-43 178.3 114 74.6
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 5.2e-43 177.9 116 75.0
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 6.8e-43 177.6 118 72.9
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 6.8e-43 177.6 124 71.0
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 8.8e-43 177.2 134 67.9
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 1.2e-42 176.8 107 77.6
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 3.4e-42 175.3 131 64.9
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 3.4e-42 175.3 102 79.4
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 4.4e-42 174.9 105 77.1
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 4.4e-42 174.9 127 67.7
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 5.7e-42 174.5 120 70.8
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 5.7e-42 174.5 131 64.1
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 7.5e-42 174.1 132 65.2
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 9.8e-42 173.7 132 65.2
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 9.8e-42 173.7 132 65.2
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 1.7e-41 172.9 108 75.0
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 1.7e-41 172.9 127 65.4
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 1.7e-41 172.9 132 64.4
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 2.8e-41 172.2 103 79.6
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.8e-41 172.2 132 64.4
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 3.7e-41 171.8 103 79.6
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 4.8e-41 171.4 129 65.1
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 6.3e-41 171.0 102 79.4
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 8.3e-41 170.6 132 62.9
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 1.1e-40 170.2 129 68.2
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 1.1e-40 170.2 120 66.7
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 1.4e-40 169.9 144 59.0
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.4e-40 169.9 118 68.6
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 1.8e-40 169.5 132 63.6
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 2.4e-40 169.1 104 76.9
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 3.1e-40 168.7 104 76.0
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 3.1e-40 168.7 109 74.3
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 7.0e-40 167.5 104 76.0
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 9.1e-40 167.2 99 77.8
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 9.1e-40 167.2 112 72.3
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 9.1e-40 167.2 108 72.2
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.2e-39 166.8 104 76.0
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.2e-39 166.8 104 76.0
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.2e-39 166.8 131 61.8
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 1.6e-39 166.4 123 65.9
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 2.7e-39 165.6 135 63.0
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 2.7e-39 165.6 133 63.2
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 2.7e-39 165.6 112 70.5
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 3.5e-39 165.2 131 64.9
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 3.5e-39 165.2 132 61.4
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 3.5e-39 165.2 112 71.4
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 3.5e-39 165.2 118 64.4
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 4.5e-39 164.9 104 74.0
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 5.9e-39 164.5 103 75.7
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 1.3e-38 163.3 108 74.1
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 1.3e-38 163.3 108 74.1
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.3e-38 163.3 108 74.1
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 1.3e-38 163.3 108 74.1
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 1.3e-38 163.3 111 72.1
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 6.5e-38 161.0 107 72.9
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 1.1e-37 160.2 206 47.6
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.5e-37 159.8 108 68.5
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 1.5e-37 159.8 102 77.5
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 5.5e-37 157.9 93 80.6
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 5.5e-37 157.9 131 62.6
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 7.2e-37 157.5 111 64.9
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 1.6e-36 156.4 117 65.8
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 2.1e-36 156.0 126 65.1
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.7e-36 155.6 117 66.7
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 2.7e-36 155.6 112 62.5
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 2.7e-36 155.6 128 58.6
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 6.1e-36 154.5 107 69.2
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 6.1e-36 154.5 137 61.3
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 1.0e-35 153.7 135 59.3
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 1.8e-35 152.9 152 54.6
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 2.3e-35 152.5 109 62.4
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 2.0e-34 149.4 111 61.3
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 1.7e-33 146.4 170 46.5
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 2.8e-33 145.6 103 68.0
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.8e-32 142.9 94 74.5
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 2.4e-32 142.5 94 73.4
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 4.5e-31 138.3 84 78.6
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.7e-30 136.3 95 69.5
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 4.0e-27 125.2 121 57.0
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 4.0e-27 125.2 102 61.8
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 7.5e-26 120.9 84 71.4
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 2.9e-25 119.0 106 51.9
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 4.9e-25 118.2 74 74.3
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.1e-24 117.1 65 84.6
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.3e-22 110.2 110 51.8
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 1.1e-21 107.1 71 69.0
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 7.3e-21 104.4 64 73.4
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 9.5e-21 104.0 65 73.8
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 4.7e-20 101.7 104 49.0
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 4.4e-18 95.1 70 65.7
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 2.2e-17 92.8 97 48.5
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 3.2e-16 89.0 103 40.8
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 7.0e-16 87.8 65 66.2
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.0e-14 84.0 100 38.0
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 5.0e-14 81.6 57 68.4
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 3.3e-13 79.0 65 60.0
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 4.3e-13 78.6 95 46.3
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 8.1e-12 74.3 90 34.4


User provided reference genes

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