Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold355G49765 Striga asiatica HOM05D013095 ORTHO05D011912 2.8e-55 218.8 103 100.0
SGA_v2.0_scaffold147G36332 Striga asiatica HOM05D013095 ORTHO05D011912 6.0e-50 201.1 103 92.2
SGA_v2.0_scaffold85G26590 Striga asiatica HOM05D013095 ORTHO05D011912 6.0e-50 201.1 103 92.2
SGA_v2.0_scaffold470G52074 Striga asiatica HOM05D013095 ORTHO05D399408 2.8e-23 112.5 55 98.2
SGA_v2.0_scaffold708G53494 Striga asiatica HOM05D013095 ORTHO05D404610 9.1e-22 107.5 103 57.3
SGA_v2.0_scaffold563G52931 Striga asiatica HOM05D013095 ORTHO05D404637 5.0e-20 101.7 103 56.3
SGA_v2.0_scaffold189G40360 Striga asiatica HOM05D013095 ORTHO05D402649 2.5e-19 99.4 103 55.3
SGA_v2.0_scaffold25G11032 Striga asiatica HOM05D018612 ORTHO05D011912 1.1e-16 90.5 98 51.0
SGA_v2.0_scaffold50G18510 Striga asiatica HOM05D029849 ORTHO05D011912 1.5e-16 90.1 89 49.4
SGA_v2.0_scaffold3G01620 Striga asiatica HOM05D018395 ORTHO05D011912 4.4e-16 88.6 89 47.2
SGA_v2.0_scaffold158G37502 Striga asiatica HOM05D018612 ORTHO05D011912 2.4e-14 82.8 81 53.1
SGA_v2.0_scaffold223G42819 Striga asiatica HOM05D018612 ORTHO05D011912 2.4e-14 82.8 81 53.1
SGA_v2.0_scaffold11G05582 Striga asiatica HOM05D018166 ORTHO05D011912 3.1e-14 82.4 89 46.1
SGA_v2.0_scaffold5187G54608 Striga asiatica HOM05D018612 ORTHO05D011912 3.1e-14 82.4 69 55.1
SGA_v2.0_scaffold279G46774 Striga asiatica HOM05D018612 ORTHO05D011912 5.3e-14 81.6 81 51.9
SGA_v2.0_scaffold266G46147 Striga asiatica HOM05D029849 ORTHO05D011912 7.0e-14 81.3 89 46.1
SGA_v2.0_scaffold211G42115 Striga asiatica HOM05D018612 ORTHO05D011912 5.9e-13 78.2 81 49.4
SGA_v2.0_scaffold85G26669 Striga asiatica HOM05D018166 ORTHO05D011912 1.0e-12 77.4 100 38.0
SGA_v2.0_scaffold136G35019 Striga asiatica HOM05D018612 ORTHO05D011912 3.8e-12 75.5 81 50.6
SGA_v2.0_scaffold139G35420 Striga asiatica HOM05D018395 ORTHO05D011912 5.0e-12 75.1 54 59.3
SGA_v2.0_scaffold14G06988 Striga asiatica HOM05D018395 ORTHO05D011912 5.0e-12 75.1 54 59.3
SGA_v2.0_scaffold223G42854 Striga asiatica HOM05D018395 ORTHO05D011912 5.0e-12 75.1 54 59.3
SGA_v2.0_scaffold22G09774 Striga asiatica HOM05D018395 ORTHO05D011912 5.0e-12 75.1 54 59.3
SGA_v2.0_scaffold332G48976 Striga asiatica HOM05D018395 ORTHO05D011912 5.0e-12 75.1 54 59.3
SGA_v2.0_scaffold96G29033 Striga asiatica HOM05D018166 ORTHO05D011912 5.0e-12 75.1 103 36.9
SGA_v2.0_scaffold99G29481 Striga asiatica HOM05D018166 ORTHO05D011912 5.0e-12 75.1 103 36.9
SGA_v2.0_scaffold21G09368 Striga asiatica HOM05D018166 ORTHO05D011912 1.9e-11 73.2 103 36.9
SGA_v2.0_scaffold6G03468 Striga asiatica HOM05D018395 ORTHO05D011912 4.2e-11 72.0 71 52.1
SGA_v2.0_scaffold117G32327 Striga asiatica HOM05D018166 ORTHO05D011912 2.1e-10 69.7 103 35.0
SGA_v2.0_scaffold76G25100 Striga asiatica HOM05D013095 ORTHO05D402094 9.7e-08 60.8 103 41.7
Lsat_1_v5_gn_3_72860 Lactuca sativa HOM05D009585 ORTHO05D000309 4.8e-07 58.5 59 49.2
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 4.8e-07 58.5 59 49.2
Lsat_1_v5_gn_2_57141 Lactuca sativa HOM05D009585 ORTHO05D000309 8.2e-07 57.8 59 47.5
Rhsim01G0020400 Rhododendron simsii HOM05D001383 ORTHO05D000309 1.4e-06 57.0 97 39.2
SalBow1G0137 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.8e-06 56.6 70 37.1
Lsat_1_v5_gn_3_24321 Lactuca sativa HOM05D009585 ORTHO05D000309 2.4e-06 56.2 58 48.3
SalBow1G0866 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.4e-06 56.2 70 38.6
SalBow7G0377 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.4e-06 56.2 70 38.6
SalBow7G0744 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.4e-06 56.2 70 38.6
SalBow7G3697 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.4e-06 56.2 70 38.6
SalBow8G4000 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.4e-06 56.2 70 38.6
SalBow5G1275 Salvia bowleyana HOM05D008808 ORTHO05D009453 3.1e-06 55.8 70 38.6
Lsat_1_v5_gn_1_95961 Lactuca sativa HOM05D009585 ORTHO05D000309 4.1e-06 55.5 60 51.7
Lsat_1_v5_gn_4_160641 Lactuca sativa HOM05D009585 ORTHO05D000309 4.1e-06 55.5 60 51.7
SalBow4G1975 Salvia bowleyana HOM05D027806 ORTHO05D009453 5.3e-06 55.1 68 38.2
Gohir.A01G145614 Gossypium hirsutum HOM05D001383 ORTHO05D000309 9.1e-06 54.3 71 42.3


User provided reference genes

Program Settings