Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold354G49755 Striga asiatica HOM05D004235 ORTHO05D005157 8.7e-96 353.6 175 100.0
SGA_v2.0_scaffold62G21574 Striga asiatica HOM05D004235 ORTHO05D005157 2.3e-72 275.8 200 73.5
Migut.J00436 Erythranthe guttata HOM05D004235 ORTHO05D005157 6.7e-72 274.2 175 77.1
Oeu052124.2 Olea europaea HOM05D004235 ORTHO05D005157 5.0e-67 258.1 175 70.9
CSS0042623 Camellia sinensis var. sinensis HOM05D004235 ORTHO05D005157 6.5e-67 257.7 175 70.3
CSS0043888 Camellia sinensis var. sinensis HOM05D004235 ORTHO05D005157 6.5e-67 257.7 175 70.3
Peaxi162Scf00498g00032 Petunia axillaris HOM05D004235 ORTHO05D005157 1.9e-66 256.1 175 70.3
Rhsim03G0234900 Rhododendron simsii HOM05D004235 ORTHO05D005157 3.2e-66 255.4 175 70.9
Hma1.2p1_1074F.1_g254400 Hydrangea macrophylla HOM05D004235 ORTHO05D005157 7.2e-66 254.2 175 70.9
Cc06_g10940 Coffea canephora HOM05D004235 ORTHO05D005157 1.6e-65 253.1 175 70.9
Nitab4.5_0000540g0150 Nicotiana tabacum HOM05D004235 ORTHO05D005157 1.6e-65 253.1 175 69.7
Nitab4.5_0003781g0020 Nicotiana tabacum HOM05D004235 ORTHO05D005157 1.6e-65 253.1 175 69.7
CAN.G1241.9 Capsicum annuum HOM05D004235 ORTHO05D005157 2.1e-65 252.7 175 69.7
Solyc12g008710.2 Solanum lycopersicum HOM05D004235 ORTHO05D005157 2.1e-65 252.7 175 69.7
GSVIVG01015250001 Vitis vinifera HOM05D004235 ORTHO05D005157 2.7e-65 252.3 175 69.1
Sopen12g003640 Solanum pennellii HOM05D004235 ORTHO05D005157 3.6e-65 251.9 175 69.7
PGSC0003DMG402000346 Solanum tuberosum HOM05D004235 ORTHO05D005157 3.6e-65 251.9 175 69.7
Dinv36730 Davidia involucrata HOM05D004235 ORTHO05D005157 1.4e-64 250.0 175 69.1
Nn8g38947 Nelumbo nucifera HOM05D004235 ORTHO05D005157 1.8e-64 249.6 175 68.6
AUR62027475 Chenopodium quinoa HOM05D004235 ORTHO05D005157 1.5e-63 246.5 175 67.4
vmacro06271 Vaccinium macrocarpon HOM05D004235 ORTHO05D005157 2.0e-63 246.1 175 68.0
HanXRQChr04g0112481 Helianthus annuus HOM05D004235 ORTHO05D005157 2.6e-63 245.7 175 68.0
CiPaw.03G220000 Carya illinoinensis HOM05D004235 ORTHO05D005157 3.3e-63 245.4 175 65.7
Lsat_1_v5_gn_8_88100 Lactuca sativa HOM05D004235 ORTHO05D005157 3.3e-63 245.4 175 68.6
QL02p063521 Quercus lobata HOM05D004235 ORTHO05D005157 3.3e-63 245.4 175 66.9
Ciclev10010146m.g Citrus clementina HOM05D004235 ORTHO05D005157 9.7e-63 243.8 175 66.3
Lj7C671G7 Lonicera japonica HOM05D004235 ORTHO05D005157 1.3e-62 243.4 175 64.6
Cfa003136 Carpinus fangiana HOM05D004235 ORTHO05D005157 1.7e-62 243.0 175 64.6
Haze_25867 Corylus avellana HOM05D004235 ORTHO05D005157 2.2e-62 242.7 175 64.6
CANSAT56G3324 Cannabis sativa HOM05D004235 ORTHO05D005157 2.8e-62 242.3 173 65.3
THA.LOC104817747 Tarenaya hassleriana HOM05D004235 ORTHO05D005157 2.8e-62 242.3 175 64.6
MD15G1202300 Malus domestica HOM05D004235 ORTHO05D005157 4.8e-62 241.5 173 65.9
unitig_26.g9162 Utricularia gibba HOM05D004235 ORTHO05D005157 4.8e-62 241.5 175 68.6
AUR62034005 Chenopodium quinoa HOM05D004235 ORTHO05D005157 8.2e-62 240.7 182 65.4
TAR383G0914 Trochodendron aralioides HOM05D004235 ORTHO05D005157 1.4e-61 240.0 175 67.4
ATR0789G124 Amborella trichopoda HOM05D004235 ORTHO05D005157 2.4e-61 239.2 175 65.7
Manes.16G105300 Manihot esculenta HOM05D004235 ORTHO05D005157 5.3e-61 238.0 175 64.6
Prupe.7G214900 Prunus persica HOM05D004235 ORTHO05D005157 5.3e-61 238.0 173 64.2
ClCG11G001880 Citrullus lanatus HOM05D004235 ORTHO05D005157 7.0e-61 237.7 175 64.6
SGA_v2.0_scaffold21G09333 Striga asiatica HOM05D004235 ORTHO05D005157 9.1e-61 237.3 175 73.1
THA.LOC104811734 Tarenaya hassleriana HOM05D004235 ORTHO05D005157 9.1e-61 237.3 175 62.9
Thecc.09G094700 Theobroma cacao HOM05D004235 ORTHO05D005157 9.1e-61 237.3 175 64.0
COL.COLO4_18249 Corchorus olitorius HOM05D004235 ORTHO05D005157 2.0e-60 236.1 175 63.4
ECA236G4919 Erigeron canadensis HOM05D004235 ORTHO05D005157 2.0e-60 236.1 175 64.6
HPP92_009154 Vanilla planifolia HOM05D004235 ORTHO05D005157 2.0e-60 236.1 175 64.0
FAN28G2658 Fragaria x ananassa HOM05D004235 ORTHO05D005157 3.5e-60 235.3 173 62.4
PGR102G2758 Punica granatum HOM05D004235 ORTHO05D005157 3.5e-60 235.3 175 63.4
Gohir.A05G028200 Gossypium hirsutum HOM05D004235 ORTHO05D005157 4.5e-60 235.0 175 64.6
Cpa.g.sc78.62 Carica papaya HOM05D004235 ORTHO05D005157 5.9e-60 234.6 175 64.0
Hund06688 Selenicereus undatus HOM05D004235 ORTHO05D005157 5.9e-60 234.6 175 64.0
CsaV3_2G001610 Cucumis sativus L. HOM05D004235 ORTHO05D005157 7.7e-60 234.2 175 62.9
FAN26G0912 Fragaria x ananassa HOM05D004235 ORTHO05D005157 7.7e-60 234.2 173 62.4
FAN26G2547 Fragaria x ananassa HOM05D004235 ORTHO05D005157 7.7e-60 234.2 173 62.4
Lj4g0008017 Lotus japonicus HOM05D004235 ORTHO05D005157 7.7e-60 234.2 175 62.9
CARHR270480 Cardamine hirsuta HOM05D004235 ORTHO05D005157 1.0e-59 233.8 175 61.7
PSO063G2511 Papaver somniferum HOM05D004235 ORTHO05D005157 1.0e-59 233.8 175 64.0
PSO832G0536 Papaver somniferum HOM05D004235 ORTHO05D005157 1.0e-59 233.8 175 64.0
AL8G32560 Arabidopsis lyrata HOM05D004235 ORTHO05D005157 1.3e-59 233.4 175 61.7
FvH4_1g06790 Fragaria vesca HOM05D004235 ORTHO05D005157 1.3e-59 233.4 173 61.8
FAN19G3193 Fragaria x ananassa HOM05D004235 ORTHO05D005157 1.3e-59 233.4 173 61.8
Gohir.D05G029800 Gossypium hirsutum HOM05D004235 ORTHO05D005157 1.3e-59 233.4 175 63.4
Gorai.009G030000 Gossypium raimondii HOM05D004235 ORTHO05D005157 1.3e-59 233.4 175 63.4
Sed0001781 Sechium edule HOM05D004235 ORTHO05D005157 1.3e-59 233.4 175 62.9
Carub.0008s1721 Capsella rubella HOM05D004235 ORTHO05D005157 1.7e-59 233.0 175 61.7
TPR.G25478 Trifolium pratense HOM05D004235 ORTHO05D005157 1.7e-59 233.0 175 62.9
MELO3C004614.2 Cucumis melo HOM05D004235 ORTHO05D005157 2.2e-59 232.6 175 62.9
Sc04g0004610 Simmondsia chinensis HOM05D004235 ORTHO05D005157 2.2e-59 232.6 175 61.7
AT5G56730 Arabidopsis thaliana HOM05D004235 ORTHO05D005157 2.9e-59 232.3 175 61.1
RcHm_v2.0_Chr2g0092561 Rosa chinensis HOM05D004235 ORTHO05D005157 2.9e-59 232.3 173 61.8
arahy.Tifrunner.gnm1.ann1.00M5T5 Arachis hypogaea HOM05D004235 ORTHO05D005157 3.8e-59 231.9 173 63.0
arahy.Tifrunner.gnm1.ann1.VZDV7L Arachis hypogaea HOM05D004235 ORTHO05D005157 3.8e-59 231.9 173 63.0
BcaB08g36065 Brassica carinata HOM05D004235 ORTHO05D005157 3.8e-59 231.9 175 61.7
Glyma.05G223700 Glycine max HOM05D004235 ORTHO05D005157 5.0e-59 231.5 175 61.7
Phvul.002G305500 Phaseolus vulgaris HOM05D004235 ORTHO05D005157 6.5e-59 231.1 175 61.7
Psat7g019200 Pisum sativum HOM05D004235 ORTHO05D005157 6.5e-59 231.1 175 62.3
BraA10t43498Z Brassica rapa HOM05D004235 ORTHO05D005157 8.5e-59 230.7 172 62.2
FAN23G1406 Fragaria x ananassa HOM05D004235 ORTHO05D005157 8.5e-59 230.7 173 60.7
Medtr8g101950 Medicago truncatula HOM05D004235 ORTHO05D005157 8.5e-59 230.7 175 62.3
Aa31LG3G12550 Aethionema arabicum HOM05D004235 ORTHO05D005157 1.1e-58 230.3 175 60.6
Thhalv10012682m.g Eutrema salsugineum HOM05D004235 ORTHO05D005157 1.1e-58 230.3 175 61.1
A10p14070 Brassica napus HOM05D004235 ORTHO05D005157 1.5e-58 229.9 172 62.2
Duzib168G2142 Durio zibethinus HOM05D004235 ORTHO05D005157 1.9e-58 229.6 175 62.3
Eucgr.C03689 Eucalyptus grandis HOM05D004235 ORTHO05D005157 1.9e-58 229.6 175 62.9
VMungo0251G2139 Vigna mungo HOM05D004235 ORTHO05D005157 1.9e-58 229.6 175 61.7
BcaC04g20058 Brassica carinata HOM05D004235 ORTHO05D005157 3.2e-58 228.8 175 61.1
EL10Ac8g19244 Beta vulgaris HOM05D004235 ORTHO05D005157 9.4e-58 227.3 201 58.2
CSS0008185 Camellia sinensis var. sinensis HOM05D004235 ORTHO05D005157 9.4e-58 227.3 181 64.6
C09p48300 Brassica napus HOM05D004235 ORTHO05D005157 1.2e-57 226.9 172 61.6
BolC9t57680H Brassica oleracea HOM05D004235 ORTHO05D005157 1.2e-57 226.9 172 61.6
Sp6g18480 Schrenkiella parvula HOM05D004235 ORTHO05D005157 1.2e-57 226.9 175 60.6
DCAR_028630 Daucus carota HOM05D004235 ORTHO05D005157 1.6e-57 226.5 176 62.5
Lalb_Chr09g0331731 Lupinus albus HOM05D004235 ORTHO05D005157 2.7e-57 225.7 175 62.9
Atru.chr7.1524 Acer truncatum HOM05D004235 ORTHO05D005157 6.1e-57 224.6 176 62.5
TWI34G1426 Tripterygium wilfordii HOM05D004235 ORTHO05D005157 8.0e-57 224.2 175 61.1
Zm00001eb162240 Zea mays HOM05D004235 ORTHO05D005157 1.8e-56 223.0 175 63.4
Aqoxy7G01320 Aquilegia oxysepala HOM05D004235 ORTHO05D005157 2.3e-56 222.6 175 62.3
TWI63G1589 Tripterygium wilfordii HOM05D004235 ORTHO05D005157 7.5e-55 217.6 174 60.3
Duzib168G1665 Durio zibethinus HOM05D004235 ORTHO05D005157 1.2e-52 210.3 175 58.3
Gohir.A08G244500 Gossypium hirsutum HOM05D004235 ORTHO05D005157 1.6e-52 209.9 175 54.9
SEGI_16235 Sequoiadendron giganteum HOM05D004235 ORTHO05D005157 2.7e-52 209.1 175 57.7
Mapoly0007s0115 Marchantia polymorpha HOM05D004235 ORTHO05D005157 7.7e-52 207.6 175 60.0
Thecc.09G094500 Theobroma cacao HOM05D004235 ORTHO05D005157 7.7e-52 207.6 175 57.1
Gohir.D08G265400 Gossypium hirsutum HOM05D004235 ORTHO05D005157 1.7e-51 206.5 175 54.3
Gorai.004G283400 Gossypium raimondii HOM05D004235 ORTHO05D005157 8.5e-51 204.1 175 53.7
SMO268G0025 Selaginella moellendorffii HOM05D004235 ORTHO05D005157 2.7e-49 199.1 173 56.6
Pp3c19_10200 Physcomitrium patens HOM05D004235 ORTHO05D005157 2.3e-48 196.1 175 58.3
Migut.J00437 Erythranthe guttata HOM05D004235 ORTHO05D005157 2.0e-47 193.0 183 56.3
Duzib150G0514 Durio zibethinus HOM05D004235 ORTHO05D005157 9.8e-47 190.7 173 52.6
Thecc.09G094600 Theobroma cacao HOM05D004235 ORTHO05D005157 6.3e-46 188.0 173 51.4
COL.COLO4_18248 Corchorus olitorius HOM05D004235 ORTHO05D005157 1.4e-45 186.8 173 52.0
CBR_g39508 Chara braunii HOM05D004235 ORTHO05D005157 4.1e-45 185.3 173 51.4
Sc18g0001660 Simmondsia chinensis HOM05D004235 ORTHO05D005157 7.0e-45 184.5 175 52.6
COL.COLO4_18247 Corchorus olitorius HOM05D004235 ORTHO05D005157 1.3e-43 180.3 174 51.7
Sc18g0001680 Simmondsia chinensis HOM05D004235 ORTHO05D005157 1.3e-43 180.3 173 53.2
Hund09051 Selenicereus undatus HOM05D004235 ORTHO05D005157 9.5e-42 174.1 173 49.7
COL.COLO4_18245 Corchorus olitorius HOM05D004235 ORTHO05D005157 2.8e-41 172.6 171 49.7
Ah.09g230260 Amaranthus hybridus HOM05D004235 ORTHO05D005157 2.3e-40 169.5 175 47.4
AUR62033265 Chenopodium quinoa HOM05D004235 ORTHO05D005157 2.3e-40 169.5 173 48.6
AUR62021351 Chenopodium quinoa HOM05D004235 ORTHO05D005157 4.0e-40 168.7 173 48.0
EL10Ac8g18336 Beta vulgaris HOM05D004235 ORTHO05D005157 8.9e-40 167.5 171 49.1
SEGI_18611 Sequoiadendron giganteum HOM05D004235 ORTHO05D005157 1.2e-39 167.2 173 46.2
Glyma.08G030800 Glycine max HOM05D004235 ORTHO05D005157 4.4e-39 165.2 133 58.6
COL.COLO4_18244 Corchorus olitorius HOM05D004235 ORTHO05D005157 2.9e-38 162.5 171 48.5
Ca_17388_v3 Cicer arietinum L. HOM05D004235 ORTHO05D005157 5.0e-35 151.8 174 46.0
MCO05G244 Micromonas commoda HOM05D004235 ORTHO05D005157 7.6e-15 84.7 193 28.5
Aa31LG3G12570 Aethionema arabicum HOM05D004235 ORTHO05D005157 1.5e-07 60.5 69 46.4
CSS0038548 Camellia sinensis var. sinensis HOM05D004235 ORTHO05D005157 9.9e-07 57.8 33 78.8


User provided reference genes

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