Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 2.4e-67 258.8 142 100.0
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 2.7e-31 139.0 141 58.2
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 6.3e-28 127.9 142 60.6
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 4.2e-24 115.2 96 69.8
Nitab4.5_0000316g0230 Nicotiana tabacum HOM05D002000 ORTHO05D002027 6.1e-23 111.3 145 53.8
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 5.2e-22 108.2 138 54.3
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 1.2e-21 107.1 101 58.4
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 1.5e-21 106.7 104 58.7
Nitab4.5_0001775g0080 Nicotiana tabacum HOM05D007435 ORTHO05D009338 1.5e-21 106.7 142 52.8
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 2.0e-21 106.3 100 61.0
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 2.0e-21 106.3 100 61.0
PGSC0003DMG401006753 Solanum tuberosum HOM05D007435 ORTHO05D009338 2.0e-21 106.3 139 51.1
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 4.4e-21 105.1 140 50.0
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 4.4e-21 105.1 139 48.9
Solyc01g068190.3 Solanum lycopersicum HOM05D007435 ORTHO05D009338 5.7e-21 104.8 139 51.8
Sopen01g030130 Solanum pennellii HOM05D007435 ORTHO05D009338 7.5e-21 104.4 101 60.4
Peaxi162Scf00087g00129 Petunia axillaris HOM05D007435 ORTHO05D009338 2.8e-20 102.4 111 58.6
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 3.7e-20 102.1 114 54.4
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 3.7e-20 102.1 114 53.5
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 3.7e-20 102.1 134 54.5
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 6.3e-20 101.3 86 65.1
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 8.3e-20 100.9 86 65.1
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 1.8e-19 99.8 141 47.5
PSO339G5565 Papaver somniferum HOM05D007435 ORTHO05D009338 2.4e-19 99.4 87 63.2
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 4.1e-19 98.6 95 61.1
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 5.4e-19 98.2 129 51.2
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 7.0e-19 97.8 95 57.9
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 7.0e-19 97.8 128 47.7
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 9.1e-19 97.4 87 59.8
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 9.1e-19 97.4 135 45.9
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 1.2e-18 97.1 116 50.9
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 1.2e-18 97.1 116 50.9
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 1.6e-18 96.7 133 48.9
DCAR_009211 Daucus carota HOM05D007435 ORTHO05D009338 2.0e-18 96.3 93 57.0
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 2.7e-18 95.9 87 58.6
HanXRQChr01g0020861 Helianthus annuus HOM05D007435 ORTHO05D009338 3.5e-18 95.5 89 59.6
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 3.5e-18 95.5 110 50.0
ECA248G3437 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-17 94.0 96 53.1
Lsat_1_v5_gn_1_100400 Lactuca sativa HOM05D007435 ORTHO05D009338 2.9e-17 92.4 91 58.2
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 3.8e-17 92.0 90 57.8
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 6.5e-17 91.3 86 60.5
ATR0006G035 Amborella trichopoda HOM05D007435 ORTHO05D009338 8.6e-17 90.9 96 55.2
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 8.6e-17 90.9 105 50.5
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 3.3e-16 89.0 143 43.4
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 3.3e-16 89.0 84 56.0
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 7.2e-16 87.8 102 51.0
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 1.2e-15 87.0 139 46.0
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 1.2e-15 87.0 105 49.5
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 1.6e-15 86.7 102 57.8
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 2.1e-15 86.3 143 43.4
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 2.1e-15 86.3 101 52.5
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 3.6e-15 85.5 90 54.4
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 6.1e-15 84.7 92 51.1
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 2.3e-14 82.8 123 45.5
MBI13_g04786_MAGBIO Magnolia biondii HOM05D007435 ORTHO05D009338 2.3e-14 82.8 85 64.7
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 5.2e-14 81.6 90 55.6
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 6.8e-14 81.3 92 53.3
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 8.9e-14 80.9 133 45.9
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 8.9e-14 80.9 72 61.1
Psat5g213320 Pisum sativum HOM05D007435 ORTHO05D009338 8.9e-14 80.9 102 48.0
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 2.0e-13 79.7 137 43.1
C07p58750 Brassica napus HOM05D007435 ORTHO05D009338 2.0e-13 79.7 137 43.8
BolC7t46323H Brassica oleracea HOM05D007435 ORTHO05D009338 2.0e-13 79.7 137 43.8
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 2.0e-13 79.7 137 43.1
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 4.4e-13 78.6 137 43.1
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 4.4e-13 78.6 90 51.1
Hma1.2p1_0269F.1_g107800 Hydrangea macrophylla HOM05D007435 ORTHO05D009338 4.4e-13 78.6 180 36.1
Gohir.D10G251200 Gossypium hirsutum HOM05D007435 ORTHO05D009338 5.7e-13 78.2 91 53.8
Gorai.011G291600 Gossypium raimondii HOM05D007435 ORTHO05D009338 5.7e-13 78.2 91 53.8
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 5.7e-13 78.2 119 47.1
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 5.7e-13 78.2 163 38.7
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 7.5e-13 77.8 90 56.7
C01p07440 Brassica napus HOM05D007435 ORTHO05D009338 7.5e-13 77.8 129 45.7
BolC1t00726H Brassica oleracea HOM05D007435 ORTHO05D009338 7.5e-13 77.8 129 45.7
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 9.8e-13 77.4 143 40.6
Gohir.A10G239300 Gossypium hirsutum HOM05D007435 ORTHO05D009338 1.3e-12 77.0 92 53.3
Medtr3g023160 Medicago truncatula HOM05D007435 ORTHO05D009338 1.3e-12 77.0 118 45.8
CARHR239440 Cardamine hirsuta HOM05D007435 ORTHO05D009338 1.7e-12 76.6 118 44.1
Sp7g29390 Schrenkiella parvula HOM05D007435 ORTHO05D009338 2.8e-12 75.9 90 53.3
arahy.Tifrunner.gnm1.ann1.4Y0UDN Arachis hypogaea HOM05D007435 ORTHO05D009338 4.9e-12 75.1 108 45.4
Thhalv10026511m.g Eutrema salsugineum HOM05D007435 ORTHO05D009338 6.3e-12 74.7 87 54.0
BcaC09g51937 Brassica carinata HOM05D007435 ORTHO05D009338 8.3e-12 74.3 127 44.9
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 8.3e-12 74.3 89 50.6
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 8.3e-12 74.3 89 50.6
CDE06G1029 Ceratophyllum demersum HOM05D007435 ORTHO05D009338 8.3e-12 74.3 84 56.0
CDE08G0963 Ceratophyllum demersum HOM05D000584 ORTHO05D009338 2.4e-11 72.8 90 53.3
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 9.2e-11 70.9 57 63.2
Glyma.11G149600 Glycine max HOM05D007435 ORTHO05D009338 1.2e-10 70.5 111 39.6
arahy.Tifrunner.gnm1.ann1.KRJM02 Arachis hypogaea HOM05D007435 ORTHO05D009338 1.6e-10 70.1 99 45.5
Ciclev10032994m.g Citrus clementina HOM05D007435 ORTHO05D009338 4.5e-10 68.6 145 40.7
HPP92_025000 Vanilla planifolia HOM05D007435 ORTHO05D009338 1.0e-09 67.4 114 44.7
Sabra01G0016900 Salix brachista HOM05D007435 ORTHO05D009338 1.3e-09 67.0 63 57.1
vmacro19756 Vaccinium macrocarpon HOM05D007435 ORTHO05D009338 1.3e-09 67.0 97 47.4
Ca_27018_v3 Cicer arietinum L. HOM05D007435 ORTHO05D009338 2.9e-09 65.9 74 51.4
Zm00001eb141550 Zea mays HOM05D007435 ORTHO05D009338 5.0e-09 65.1 120 39.2
Os01g0940600 Oryza sativa ssp. japonica HOM05D007435 ORTHO05D009338 1.9e-08 63.2 93 45.2
PGR031G0502 Punica granatum HOM05D007435 ORTHO05D009338 1.9e-08 63.2 91 47.3
Zm00001eb363190 Zea mays HOM05D007435 ORTHO05D009338 1.9e-08 63.2 119 38.7
Haze_19805 Corylus avellana HOM05D007435 ORTHO05D009338 1.0e-06 57.4 72 51.4
VMungo1080G0635 Vigna mungo HOM05D007435 ORTHO05D009338 2.3e-06 56.2 69 44.9
Phvul.005G033400 Phaseolus vulgaris HOM05D007435 ORTHO05D009338 3.0e-06 55.8 108 38.9


User provided reference genes

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