Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold353G49706 Striga asiatica HOM05D000256 ORTHO05D000119 1.5e-80 302.8 144 100.0
Migut.F00960 Erythranthe guttata HOM05D000256 ORTHO05D000119 7.8e-26 120.9 108 51.9
Migut.F00962 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.0e-25 119.0 114 50.9
Oeu037984.1 Olea europaea HOM05D000256 ORTHO05D000119 7.3e-24 114.4 134 47.0
Migut.F00961 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.2e-23 113.6 131 44.3
Oeu020862.1 Olea europaea HOM05D000256 ORTHO05D000119 1.1e-22 110.5 124 47.6
Migut.F00958 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.8e-20 102.1 104 49.0
Migut.F00959 Erythranthe guttata HOM05D000256 ORTHO05D000119 4.9e-20 101.7 138 41.3
Oeu061052.1 Olea europaea HOM05D000256 ORTHO05D000119 1.1e-19 100.5 100 45.0
Oeu020002.1 Olea europaea HOM05D000256 ORTHO05D000119 7.1e-19 97.8 126 42.1
SGA_v2.0_scaffold165G38222 Striga asiatica HOM05D000256 ORTHO05D000119 3.0e-17 92.4 94 46.8
SGA_v2.0_scaffold253G45117 Striga asiatica HOM05D000256 ORTHO05D000119 3.0e-17 92.4 109 45.0
Oeu043247.1 Olea europaea HOM05D000256 ORTHO05D000119 5.6e-16 88.2 87 44.8
Oeu028943.1 Olea europaea HOM05D000256 ORTHO05D000119 4.8e-15 85.1 87 44.8
Oeu055432.1 Olea europaea HOM05D000256 ORTHO05D000119 8.1e-15 84.3 110 42.7
Oeu033249.1 Olea europaea HOM05D000256 ORTHO05D000119 1.4e-14 83.6 110 40.0
SGA_v2.0_scaffold4904G54562 Striga asiatica HOM05D000256 ORTHO05D000119 1.4e-14 83.6 78 47.4
SGA_v2.0_scaffold165G38221 Striga asiatica HOM05D000256 ORTHO05D000119 6.9e-14 81.3 108 39.8
Migut.N01875 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.2e-13 80.5 123 36.6
SalBow4G1941 Salvia bowleyana HOM05D000256 ORTHO05D000119 4.5e-13 78.6 102 36.3
Atru.chr4.1735 Acer truncatum HOM05D000256 ORTHO05D000119 9.3e-11 70.9 108 36.1
TAR362G0888 Trochodendron aralioides HOM05D000256 ORTHO05D000119 9.3e-11 70.9 92 42.4
PGR042G0022 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 118 35.6
PGR042G0549 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 118 35.6
PGR042G0996 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 118 35.6
PGR042G1053 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 118 35.6
PGR042G1377 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 118 35.6
PGR042G1542 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 118 35.6
PGR042G1949 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 118 35.6
PGR042G2280 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 118 35.6
PGR042G2642 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 118 35.6
PGR042G3183 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 118 35.6
PGR042G3343 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 118 35.6
PGR042G3721 Punica granatum HOM05D000256 ORTHO05D000119 1.2e-10 70.5 118 35.6
SalBow4G1752 Salvia bowleyana HOM05D000256 ORTHO05D000119 7.9e-10 67.8 67 47.8
MELO3C027808.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.8e-09 66.6 96 39.6
MELO3C027686.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.3e-09 66.2 96 40.6
MELO3C028734.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.3e-09 66.2 96 40.6
CsaV3_4G030240 Cucumis sativus L. HOM05D000256 ORTHO05D000119 2.3e-09 66.2 122 36.1
MELO3C001002.2 Cucumis melo HOM05D000256 ORTHO05D000119 3.0e-09 65.9 122 35.2
MELO3C027647.2 Cucumis melo HOM05D000256 ORTHO05D000119 3.0e-09 65.9 122 35.2
MELO3C027840.2 Cucumis melo HOM05D000256 ORTHO05D000119 3.0e-09 65.9 108 33.3
MELO3C028733.2 Cucumis melo HOM05D000256 ORTHO05D000119 3.9e-09 65.5 122 35.2
CsaV3_4G030190 Cucumis sativus L. HOM05D000256 ORTHO05D000119 3.9e-09 65.5 122 36.1
MELO3C028140.2 Cucumis melo HOM05D000256 ORTHO05D000119 5.1e-09 65.1 122 35.2
PGR042G2906 Punica granatum HOM05D000256 ORTHO05D000119 5.1e-09 65.1 118 33.9
MELO3C000712.2 Cucumis melo HOM05D000256 ORTHO05D000119 6.7e-09 64.7 122 35.2
MELO3C023040.2 Cucumis melo HOM05D000256 ORTHO05D000119 8.7e-09 64.3 106 32.1
MELO3C027895.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.1e-08 63.9 108 32.4
PSO170G1809 Papaver somniferum HOM05D000256 ORTHO05D000119 1.1e-08 63.9 123 31.7
Sed0009184 Sechium edule HOM05D000256 ORTHO05D000119 1.1e-08 63.9 134 35.1
Atru.chr1.833 Acer truncatum HOM05D000256 ORTHO05D000119 1.9e-08 63.2 91 37.4
EL10Ac7g17899 Beta vulgaris HOM05D000256 ORTHO05D000119 2.5e-08 62.8 102 37.3
Migut.N01876 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.5e-08 62.8 123 33.3
Sed0024573 Sechium edule HOM05D000256 ORTHO05D000119 2.5e-08 62.8 117 34.2
SGA_v2.0_scaffold198G41089 Striga asiatica HOM05D047370 ORTHO05D000119 2.5e-08 62.8 129 34.1
Ciclev10017715m.g Citrus clementina HOM05D000256 ORTHO05D000119 3.3e-08 62.4 98 31.6
MELO3C028737.2 Cucumis melo HOM05D000256 ORTHO05D000119 3.3e-08 62.4 122 33.6
PSO017G6864 Papaver somniferum HOM05D000256 ORTHO05D000119 4.3e-08 62.0 92 40.2
MELO3C028732.2 Cucumis melo HOM05D000256 ORTHO05D000119 5.6e-08 61.6 119 37.8
PSO675G0702 Papaver somniferum HOM05D000256 ORTHO05D000119 5.6e-08 61.6 123 34.1
Prupe.8G208800 Prunus persica HOM05D000256 ORTHO05D000119 5.6e-08 61.6 114 28.9
Lalb_Chr18g0044301 Lupinus albus HOM05D000256 ORTHO05D000119 7.4e-08 61.2 115 35.7
MELO3C030137.2 Cucumis melo HOM05D000256 ORTHO05D000119 9.6e-08 60.8 99 33.3
Atru.chr8.2531 Acer truncatum HOM05D000256 ORTHO05D000119 1.3e-07 60.5 122 32.0
C06p50860 Brassica napus HOM05D005246 ORTHO05D000119 1.3e-07 60.5 92 38.0
BolC6t40108H Brassica oleracea HOM05D005246 ORTHO05D000119 1.3e-07 60.5 94 40.4
Nn1g08794 Nelumbo nucifera HOM05D000256 ORTHO05D000119 1.6e-07 60.1 100 41.0
TWI77G1024 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 1.6e-07 60.1 119 35.3
A07p42260 Brassica napus HOM05D005246 ORTHO05D000119 2.1e-07 59.7 92 38.0
BraA07t31754Z Brassica rapa HOM05D005246 ORTHO05D000119 2.1e-07 59.7 92 38.0
Lalb_Chr20g0114951 Lupinus albus HOM05D000256 ORTHO05D000119 2.1e-07 59.7 118 33.9
Lalb_Chr22g0360131 Lupinus albus HOM05D000256 ORTHO05D000119 2.1e-07 59.7 90 37.8
Prupe.1G057300 Prunus persica HOM05D000256 ORTHO05D000119 2.1e-07 59.7 100 32.0
TWI59G0765 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 2.8e-07 59.3 116 32.8
Carub.0005s2244 Capsella rubella HOM05D005246 ORTHO05D000119 3.7e-07 58.9 98 34.7
MELO3C024072.2 Cucumis melo HOM05D000256 ORTHO05D000119 3.7e-07 58.9 99 33.3
Lalb_Chr23g0277441 Lupinus albus HOM05D000256 ORTHO05D000119 3.7e-07 58.9 97 35.1
PGR042G2813 Punica granatum HOM05D000256 ORTHO05D000119 3.7e-07 58.9 85 43.5
Sed0025678 Sechium edule HOM05D000256 ORTHO05D000119 3.7e-07 58.9 113 31.9
CANSAT78G2324 Cannabis sativa HOM05D000256 ORTHO05D000119 4.8e-07 58.5 105 32.4
Nn1g08741 Nelumbo nucifera HOM05D000256 ORTHO05D000119 4.8e-07 58.5 121 33.1
Nn1g08742 Nelumbo nucifera HOM05D000256 ORTHO05D000119 4.8e-07 58.5 121 33.1
A07p42270 Brassica napus HOM05D005246 ORTHO05D000119 6.2e-07 58.2 92 37.0
Lalb_Chr20g0114961 Lupinus albus HOM05D000256 ORTHO05D000119 6.2e-07 58.2 125 32.8
TAR362G1185 Trochodendron aralioides HOM05D000256 ORTHO05D000119 6.2e-07 58.2 113 31.9
Ciclev10006952m.g Citrus clementina HOM05D000256 ORTHO05D000119 8.1e-07 57.8 94 34.0
MELO3C028058.2 Cucumis melo HOM05D000256 ORTHO05D000119 8.1e-07 57.8 98 40.8
Manes.03G171700 Manihot esculenta HOM05D000256 ORTHO05D000119 8.1e-07 57.8 112 35.7
Peaxi162Scf01004g00013 Petunia axillaris HOM05D000256 ORTHO05D000119 8.1e-07 57.8 85 38.8
PGR042G3114 Punica granatum HOM05D000256 ORTHO05D005461 8.1e-07 57.8 84 35.7
PGR044G2343 Punica granatum HOM05D000256 ORTHO05D000119 8.1e-07 57.8 79 39.2
Rhsim03G0219200 Rhododendron simsii HOM05D000256 ORTHO05D000119 8.1e-07 57.8 71 38.0
Sed0003358 Sechium edule HOM05D000256 ORTHO05D000119 8.1e-07 57.8 113 31.9
Sed0013512 Sechium edule HOM05D000256 ORTHO05D000119 8.1e-07 57.8 113 31.9
Sed0015315 Sechium edule HOM05D000256 ORTHO05D000119 8.1e-07 57.8 113 31.9
TPR.G22372 Trifolium pratense HOM05D000256 ORTHO05D000119 8.1e-07 57.8 124 33.1
TPR.G23404 Trifolium pratense HOM05D000256 ORTHO05D000119 8.1e-07 57.8 131 29.0
EL10Ac1g01186 Beta vulgaris HOM05D000256 ORTHO05D000119 1.1e-06 57.4 127 33.1
Gohir.A04G051675 Gossypium hirsutum HOM05D000256 ORTHO05D000119 1.1e-06 57.4 121 31.4
Gohir.A05G319342 Gossypium hirsutum HOM05D000256 ORTHO05D000119 1.1e-06 57.4 110 36.4
Gohir.A09G053633 Gossypium hirsutum HOM05D000256 ORTHO05D000119 1.1e-06 57.4 119 29.4
Nn1g08718 Nelumbo nucifera HOM05D000256 ORTHO05D000119 1.1e-06 57.4 114 35.1
PGR044G0898 Punica granatum HOM05D000256 ORTHO05D000119 1.1e-06 57.4 103 34.0
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 1.1e-06 57.4 78 35.9
Sed0016832 Sechium edule HOM05D000256 ORTHO05D000119 1.1e-06 57.4 113 31.9
Carub.0005s2243 Capsella rubella HOM05D005246 ORTHO05D000119 1.4e-06 57.0 93 31.2
FAN15G1245 Fragaria x ananassa HOM05D000256 ORTHO05D000119 1.4e-06 57.0 88 35.2
Manes.03G171600 Manihot esculenta HOM05D000256 ORTHO05D000119 1.4e-06 57.0 108 35.2
Rhsim07G0183000 Rhododendron simsii HOM05D000560 ORTHO05D000417 1.4e-06 57.0 122 34.4
Sc13g0002860 Simmondsia chinensis HOM05D000256 ORTHO05D000119 1.4e-06 57.0 90 36.7
GSVIVG01014873001 Vitis vinifera HOM05D000256 ORTHO05D000119 1.4e-06 57.0 128 32.8
FvH4_2g19720 Fragaria vesca HOM05D000256 ORTHO05D000119 1.8e-06 56.6 88 35.2
FAN24G3535 Fragaria x ananassa HOM05D000256 ORTHO05D000119 1.8e-06 56.6 88 35.2
Gohir.D05G317450 Gossypium hirsutum HOM05D000256 ORTHO05D000119 1.8e-06 56.6 121 31.4
PSO063G0756 Papaver somniferum HOM05D000256 ORTHO05D000119 1.8e-06 56.6 121 33.1
PSO104G0213 Papaver somniferum HOM05D000256 ORTHO05D000119 1.8e-06 56.6 78 43.6
PSO541G1555 Papaver somniferum HOM05D000256 ORTHO05D000119 1.8e-06 56.6 101 35.6
RcHm_v2.0_Chr4g0396811 Rosa chinensis HOM05D000256 ORTHO05D000119 1.8e-06 56.6 122 27.9
RcHm_v2.0_Chr6g0285421 Rosa chinensis HOM05D000256 ORTHO05D000119 1.8e-06 56.6 88 34.1
Sabra18G0122400 Salix brachista HOM05D000256 ORTHO05D000119 1.8e-06 56.6 86 34.9
AL1G14350 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 2.4e-06 56.2 90 34.4
CANSAT78G1242 Cannabis sativa HOM05D000256 ORTHO05D000119 2.4e-06 56.2 111 33.3
FvH4_1g24901 Fragaria vesca HOM05D000256 ORTHO05D000119 2.4e-06 56.2 124 32.3
Gohir.D09G053014 Gossypium hirsutum HOM05D000256 ORTHO05D000119 2.4e-06 56.2 119 29.4
Gorai.006G055500 Gossypium raimondii HOM05D000256 ORTHO05D000119 2.4e-06 56.2 119 29.4
Lalb_Chr15g0076181 Lupinus albus HOM05D000256 ORTHO05D000119 2.4e-06 56.2 126 31.7
Nn1g03103 Nelumbo nucifera HOM05D000256 ORTHO05D000119 2.4e-06 56.2 116 29.3
Nn1g08719 Nelumbo nucifera HOM05D000256 ORTHO05D000119 2.4e-06 56.2 84 34.5
Atru.chr8.2528 Acer truncatum HOM05D000256 ORTHO05D000119 3.1e-06 55.8 122 28.7
BcaNung02888 Brassica carinata HOM05D000256 ORTHO05D000119 3.1e-06 55.8 101 36.6
C07p56620 Brassica napus HOM05D000256 ORTHO05D000119 3.1e-06 55.8 101 36.6
BolC7t46141H Brassica oleracea HOM05D000256 ORTHO05D000119 3.1e-06 55.8 101 36.6
MELO3C029931.2 Cucumis melo HOM05D000256 ORTHO05D000119 3.1e-06 55.8 97 33.0
CsaV3_4G030180 Cucumis sativus L. HOM05D012710 ORTHO05D014596 3.1e-06 55.8 80 41.2
FvH4_2g19730 Fragaria vesca HOM05D000256 ORTHO05D000119 3.1e-06 55.8 88 35.2
FAN24G2576 Fragaria x ananassa HOM05D000256 ORTHO05D000119 3.1e-06 55.8 88 35.2
Gorai.009G340100 Gossypium raimondii HOM05D000256 ORTHO05D000119 3.1e-06 55.8 121 31.4
Medtr1g058520 Medicago truncatula HOM05D000256 ORTHO05D000119 3.1e-06 55.8 102 30.4
Nn1g08743 Nelumbo nucifera HOM05D000256 ORTHO05D000119 3.1e-06 55.8 121 32.2
PSO104G0050 Papaver somniferum HOM05D000256 ORTHO05D000119 3.1e-06 55.8 124 30.6
Prupe.1G059300 Prunus persica HOM05D000256 ORTHO05D000119 3.1e-06 55.8 122 32.0
Ciclev10006715m.g Citrus clementina HOM05D000256 ORTHO05D000119 4.0e-06 55.5 87 34.5
Ciclev10006894m.g Citrus clementina HOM05D000256 ORTHO05D000119 4.0e-06 55.5 87 34.5
MELO3C027517.2 Cucumis melo HOM05D000256 ORTHO05D000119 4.0e-06 55.5 97 32.0
MELO3C027521.2 Cucumis melo HOM05D000256 ORTHO05D000119 4.0e-06 55.5 97 32.0
MELO3C031156.2 Cucumis melo HOM05D000256 ORTHO05D000119 4.0e-06 55.5 89 34.8
Eucgr.H01885 Eucalyptus grandis HOM05D000256 ORTHO05D000119 4.0e-06 55.5 107 30.8
FAN12G4246 Fragaria x ananassa HOM05D000256 ORTHO05D000119 4.0e-06 55.5 95 34.7
Phvul.011G123000 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 4.0e-06 55.5 111 28.8
Potri.002G252500 Populus trichocarpa HOM05D000256 ORTHO05D000119 4.0e-06 55.5 84 34.5
PGR044G0923 Punica granatum HOM05D000256 ORTHO05D000119 4.0e-06 55.5 111 34.2
GSVIVG01014874001 Vitis vinifera HOM05D000256 ORTHO05D000119 4.0e-06 55.5 123 33.3
BraA03t14928Z Brassica rapa HOM05D000256 ORTHO05D000119 5.3e-06 55.1 101 35.6
CANSAT35G0230 Cannabis sativa HOM05D000256 ORTHO05D000119 5.3e-06 55.1 77 37.7
PSO339G5481 Papaver somniferum HOM05D000256 ORTHO05D000119 5.3e-06 55.1 100 35.0
PSO339G5905 Papaver somniferum HOM05D000256 ORTHO05D000119 5.3e-06 55.1 100 35.0
Phvul.008G177700 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 5.3e-06 55.1 93 29.0
RcHm_v2.0_Chr5g0046141 Rosa chinensis HOM05D000256 ORTHO05D000119 5.3e-06 55.1 136 30.1
Cfa014872 Carpinus fangiana HOM05D000256 ORTHO05D000119 6.9e-06 54.7 130 30.0
MELO3C028622.2 Cucumis melo HOM05D000256 ORTHO05D000119 6.9e-06 54.7 82 40.2
CsaV3_2G012100 Cucumis sativus L. HOM05D000256 ORTHO05D000119 6.9e-06 54.7 86 36.0
Migut.F01939 Erythranthe guttata HOM05D000256 ORTHO05D000119 6.9e-06 54.7 98 31.6
Lj5g0009194 Lotus japonicus HOM05D000256 ORTHO05D000119 6.9e-06 54.7 127 33.1
Lalb_Chr17g0336911 Lupinus albus HOM05D000256 ORTHO05D000119 6.9e-06 54.7 97 35.1
MD13G1110700 Malus domestica HOM05D000256 ORTHO05D000119 6.9e-06 54.7 120 30.0
Nn6g33519 Nelumbo nucifera HOM05D000256 ORTHO05D000119 6.9e-06 54.7 116 29.3
PGR044G1218 Punica granatum HOM05D000256 ORTHO05D000119 6.9e-06 54.7 111 32.4
PGSC0003DMG400041960 Solanum tuberosum HOM05D000256 ORTHO05D000119 6.9e-06 54.7 113 32.7
Atru.chr8.2527 Acer truncatum HOM05D000256 ORTHO05D000119 9.0e-06 54.3 120 30.8
C08p01360 Brassica napus HOM05D000256 ORTHO05D000119 9.0e-06 54.3 110 29.1
CANSAT21G1227 Cannabis sativa HOM05D000256 ORTHO05D000119 9.0e-06 54.3 92 33.7
Duzib268G1414 Durio zibethinus HOM05D000256 ORTHO05D000119 9.0e-06 54.3 134 28.4
Thhalv10010926m.g Eutrema salsugineum HOM05D005246 ORTHO05D000119 9.0e-06 54.3 97 33.0
FvH4_4g05610 Fragaria vesca HOM05D000256 ORTHO05D000119 9.0e-06 54.3 116 33.6
Lalb_Chr18g0045921 Lupinus albus HOM05D000256 ORTHO05D000119 9.0e-06 54.3 89 34.8
Psat6g084040 Pisum sativum HOM05D000256 ORTHO05D000119 9.0e-06 54.3 125 28.8
PGR044G1476 Punica granatum HOM05D000256 ORTHO05D000119 9.0e-06 54.3 93 29.0


User provided reference genes

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