Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 5.0e-168 594.3 298 100.0
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 3.0e-128 462.2 309 74.4
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.1e-122 443.7 315 70.8
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.9e-119 433.0 313 69.0
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 1.9e-119 433.0 311 68.8
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 1.2e-116 423.7 315 67.6
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 3.4e-116 422.2 316 67.4
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 5.8e-116 421.4 314 66.2
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 3.8e-115 418.7 315 67.0
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 4.9e-115 418.3 315 67.0
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 4.9e-115 418.3 337 63.2
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 3.5e-113 412.1 309 67.0
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.0e-112 410.6 309 66.0
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 1.0e-112 410.6 319 67.4
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 1.7e-112 409.8 314 65.6
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 8.7e-112 407.5 310 66.8
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 2.5e-111 406.0 314 65.9
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 3.3e-111 405.6 317 64.0
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 7.3e-111 404.4 309 64.4
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 9.6e-111 404.1 317 64.0
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 1.3e-110 403.7 316 65.5
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 2.1e-110 402.9 307 64.5
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 4.8e-110 401.7 316 63.9
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 6.2e-110 401.4 316 64.2
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 8.1e-110 401.0 316 64.2
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 1.8e-109 399.8 309 63.4
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 1.8e-109 399.8 347 59.4
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 6.9e-109 397.9 303 64.0
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 9.0e-109 397.5 311 62.4
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 3.4e-108 395.6 316 62.7
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 4.4e-108 395.2 309 63.4
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 7.6e-108 394.4 308 63.6
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 1.3e-107 393.7 309 65.0
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 1.7e-107 393.3 316 62.7
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 2.2e-107 392.9 309 65.4
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 8.4e-107 391.0 312 63.1
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 1.1e-106 390.6 309 64.1
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 1.9e-106 389.8 316 62.0
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 2.4e-106 389.4 317 62.8
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 3.2e-106 389.0 322 60.9
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 1.2e-105 387.1 316 61.1
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 1.6e-105 386.7 309 61.5
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 2.1e-105 386.3 310 62.3
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 2.1e-105 386.3 316 61.7
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 2.7e-105 386.0 316 61.4
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 4.6e-105 385.2 309 61.5
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 6.0e-105 384.8 309 61.2
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 7.9e-105 384.4 309 63.8
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 1.0e-104 384.0 322 61.8
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 1.3e-104 383.6 310 61.6
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 1.7e-104 383.3 311 62.1
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 2.3e-104 382.9 312 62.8
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 3.0e-104 382.5 305 61.6
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 6.6e-104 381.3 309 63.4
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 2.5e-103 379.4 311 60.1
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 4.3e-103 378.6 316 60.1
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 5.6e-103 378.3 311 60.8
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 1.3e-102 377.1 303 61.4
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 1.6e-102 376.7 310 60.3
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 2.1e-102 376.3 310 60.0
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 2.8e-102 375.9 324 59.3
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 3.6e-102 375.6 309 58.9
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 6.2e-102 374.8 310 60.0
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 1.1e-101 374.0 311 61.4
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 4.0e-101 372.1 309 60.5
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 5.3e-101 371.7 311 59.5
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 9.0e-101 370.9 311 58.8
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 9.0e-101 370.9 311 59.2
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 1.2e-100 370.5 336 58.3
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 1.2e-100 370.5 309 61.2
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 1.5e-100 370.2 304 61.5
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 4.5e-100 368.6 272 66.5
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 9.9e-100 367.5 281 66.2
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 2.2e-99 366.3 302 60.6
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 8.4e-99 364.4 311 59.5
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 2.4e-98 362.8 315 57.8
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 3.5e-97 359.0 290 63.1
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 4.6e-97 358.6 311 59.5
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 7.9e-97 357.8 311 58.8
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 8.7e-96 354.4 347 54.2
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 1.9e-95 353.2 311 58.2
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 4.3e-95 352.1 362 52.5
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 3.7e-94 349.0 314 57.6
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 2.4e-93 346.3 311 57.6
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 2.4e-93 346.3 311 56.6
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 3.1e-93 345.9 292 63.7
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 9.0e-93 344.4 306 56.5
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 6.5e-91 338.2 290 60.0
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 7.9e-89 331.3 307 56.0
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 2.3e-88 329.7 290 60.0
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 1.5e-87 327.0 285 58.6
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 2.5e-87 326.2 199 76.9
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 2.4e-85 319.7 350 50.0
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 3.4e-84 315.8 308 54.9
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 3.8e-83 312.4 282 59.2
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 3.8e-83 312.4 289 58.5
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 6.5e-83 311.6 198 73.7
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 1.4e-82 310.5 222 66.7
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 4.6e-81 305.4 302 52.6
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 3.9e-80 302.4 321 48.6
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 1.4e-77 293.9 309 51.5
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 1.5e-76 290.4 253 57.7
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 2.0e-76 290.0 302 51.3
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.1e-71 274.2 306 47.4
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 5.9e-68 261.9 282 51.8
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 1.7e-67 260.4 201 61.7
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 1.4e-66 257.3 290 50.3
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 2.1e-65 253.4 224 56.7
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 2.1e-65 253.4 231 55.8
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 2.6e-63 246.5 213 55.9
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 2.2e-62 243.4 278 46.4
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 9.7e-55 218.0 211 55.5
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 9.1e-53 211.5 192 58.3
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 2.7e-52 209.9 174 63.8
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 4.5e-52 209.1 200 55.5
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 8.8e-48 194.9 150 58.0
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 3.4e-47 193.0 137 67.9
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 7.2e-42 175.3 243 46.1
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 8.8e-40 168.3 314 32.5
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 1.3e-38 164.5 213 45.5
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 9.2e-37 158.3 109 68.8
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 1.7e-35 154.1 316 34.8
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 5.7e-31 139.0 229 37.1
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 9.2e-29 131.7 113 56.6
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 2.7e-28 130.2 269 33.1
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 6.2e-25 119.0 138 52.2
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 2.8e-17 93.6 256 28.1
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 6.8e-16 89.0 90 57.8
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 1.3e-14 84.7 53 71.7
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 2.4e-13 80.5 60 60.0
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 1.6e-12 77.8 63 55.6
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 2.3e-11 73.9 74 50.0
SEGI_02138 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 3.1e-08 63.5 70 47.1
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 3.4e-07 60.1 82 47.6
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 9.9e-07 58.5 75 46.7


User provided reference genes

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