Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 2.5e-200 701.8 335 100.0
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 1.0e-137 493.8 298 78.2
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 2.2e-127 459.5 307 71.0
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 9.1e-126 454.1 294 72.1
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 5.5e-123 444.9 284 73.9
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 7.9e-122 441.0 298 68.8
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 1.5e-120 436.8 297 67.7
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 7.4e-120 434.5 294 67.7
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 3.7e-119 432.2 294 67.7
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 9.1e-118 427.6 294 68.0
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 8.5e-116 421.0 306 63.7
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 1.9e-115 419.9 323 61.3
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 2.7e-114 416.0 318 62.3
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 1.8e-113 413.3 299 63.5
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 2.3e-113 412.9 301 64.1
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 2.3e-113 412.9 292 64.4
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 3.0e-113 412.5 301 63.8
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 4.0e-113 412.1 283 67.8
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 8.8e-113 411.0 291 63.9
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 6.3e-111 404.8 305 62.6
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 3.1e-110 402.5 291 65.3
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 4.5e-109 398.7 312 61.2
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 2.2e-108 396.4 302 60.9
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 6.5e-108 394.8 297 61.3
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 8.5e-108 394.4 298 62.1
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 4.2e-107 392.1 318 57.2
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 7.2e-107 391.3 316 58.5
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 9.4e-107 391.0 297 61.3
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 9.4e-107 391.0 313 57.2
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 1.2e-106 390.6 289 65.1
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 3.6e-106 389.0 298 61.7
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 6.1e-106 388.3 291 61.9
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 6.1e-106 388.3 297 60.9
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 8.0e-106 387.9 299 60.5
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 2.3e-105 386.3 284 62.0
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 3.0e-105 386.0 285 63.2
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 5.2e-105 385.2 285 61.8
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 6.8e-105 384.8 296 62.2
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 6.8e-105 384.8 294 60.5
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 3.4e-104 382.5 301 61.5
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 3.4e-104 382.5 327 55.7
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 3.4e-104 382.5 295 61.0
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 4.4e-104 382.1 290 60.3
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 4.4e-104 382.1 301 60.1
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 9.8e-104 380.9 319 56.4
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 1.3e-103 380.6 312 59.3
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 1.3e-103 380.6 300 59.7
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.3e-103 380.6 296 60.1
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 1.3e-103 380.6 296 60.1
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 1.3e-103 380.6 297 60.6
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 1.3e-103 380.6 328 55.8
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 2.2e-103 379.8 296 60.5
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 8.3e-103 377.9 291 61.5
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 8.3e-103 377.9 286 60.5
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 8.3e-103 377.9 297 60.6
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 8.3e-103 377.9 301 60.1
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 1.1e-102 377.5 301 60.8
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 1.4e-102 377.1 286 61.5
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 1.8e-102 376.7 290 60.3
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 3.1e-102 375.9 298 60.7
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 7.0e-102 374.8 312 57.1
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 1.2e-101 374.0 292 59.9
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 3.5e-101 372.5 304 57.6
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 7.7e-101 371.3 297 59.3
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 7.7e-101 371.3 294 61.2
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 1.0e-100 370.9 295 59.0
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 1.3e-100 370.5 293 59.4
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 1.3e-100 370.5 298 57.7
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 8.6e-100 367.9 295 58.6
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 8.6e-100 367.9 294 61.2
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 3.2e-99 365.9 294 60.9
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 5.5e-99 365.2 295 57.3
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 7.2e-99 364.8 291 59.1
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 1.2e-98 364.0 294 60.5
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 2.8e-98 362.8 286 59.8
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 3.6e-98 362.5 284 59.2
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 3.6e-98 362.5 284 59.2
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 6.1e-98 361.7 286 58.4
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 8.0e-98 361.3 289 59.9
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 1.0e-97 360.9 293 57.3
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 2.3e-97 359.8 288 60.4
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 3.0e-97 359.4 291 58.8
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 4.0e-97 359.0 284 59.5
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 8.8e-97 357.8 324 55.6
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 1.2e-96 357.5 293 57.7
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 5.7e-96 355.1 303 56.4
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 4.9e-95 352.1 417 44.6
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.1e-94 350.9 319 55.8
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.9e-91 340.1 263 60.1
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 2.5e-91 339.7 286 55.6
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 5.6e-91 338.6 303 52.8
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 9.5e-91 337.8 310 52.9
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.5e-88 330.5 285 55.8
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 3.0e-84 316.2 444 40.8
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 4.4e-80 302.4 286 51.0
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 2.9e-79 299.7 292 50.3
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 4.9e-79 298.9 292 54.8
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 3.5e-77 292.7 319 47.3
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 2.6e-72 276.6 245 56.7
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 2.9e-71 273.1 309 43.0
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.4e-70 270.0 295 43.7
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 7.3e-59 231.9 300 40.0
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 1.8e-57 227.3 177 59.9
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.6e-53 214.2 297 40.1
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 1.3e-47 194.5 140 63.6
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.3e-42 177.9 244 37.7
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 4.2e-38 162.9 114 64.9
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 1.6e-34 151.0 114 61.4
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 7.9e-29 132.1 89 64.0
Cre09.g398150 Chlamydomonas reinhardtii HOM05D007134 ORTHO05D009004 5.0e-07 59.7 88 37.5
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 6.5e-07 59.3 70 47.1


User provided reference genes

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