Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold34G13935 Striga asiatica HOM05D020001 ORTHO05D022546 3.6e-141 505.0 267 100.0
SGA_v2.0_scaffold47G17719 Striga asiatica HOM05D017541 ORTHO05D019212 1.7e-10 70.9 60 70.0
Zm00001eb157940 Zea mays HOM05D041900 ORTHO05D049615 5.2e-07 59.3 62 58.1
Thhalv10009072m.g Eutrema salsugineum HOM05D020001 ORTHO05D022546 6.8e-07 58.9 64 50.0
FAN21G2743 Fragaria x ananassa HOM05D020001 ORTHO05D022546 8.8e-07 58.5 70 48.6
FAN11G0275 Fragaria x ananassa HOM05D020001 ORTHO05D022546 1.5e-06 57.8 71 47.9
FAN21G2794 Fragaria x ananassa HOM05D017541 ORTHO05D019212 1.5e-06 57.8 76 48.7
Os12g0168150 Oryza sativa ssp. japonica HOM05D014679 ORTHO05D019212 4.4e-06 56.2 57 57.9
Os01g0657801 Oryza sativa ssp. japonica HOM05D041900 ORTHO05D049615 7.5e-06 55.5 58 62.1


User provided reference genes

Program Settings