Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold34G13828 Striga asiatica HOM05D000300 ORTHO05D008505 4.1e-110 402.1 206 100.0
Manes.03G111900 Manihot esculenta HOM05D000300 ORTHO05D008505 4.9e-71 272.3 206 71.8
MSTRG.6839 Avicennia marina HOM05D000300 ORTHO05D008505 2.4e-70 270.0 205 73.2
Duzib213G0972 Durio zibethinus HOM05D000300 ORTHO05D008505 2.4e-70 270.0 206 70.9
Ciclev10007647m.g Citrus clementina HOM05D000300 ORTHO05D000383 3.2e-70 269.6 206 71.4
Potri.011G121000 Populus trichocarpa HOM05D000300 ORTHO05D008505 3.2e-70 269.6 205 72.2
Dinv04313 Davidia involucrata HOM05D000300 ORTHO05D008505 4.2e-70 269.2 206 71.4
GSVIVG01014363001 Vitis vinifera HOM05D000300 ORTHO05D000383 1.6e-69 267.3 204 72.1
TWI38G1039 Tripterygium wilfordii HOM05D000300 ORTHO05D008505 4.6e-69 265.8 206 69.4
CiPaw.11G167900 Carya illinoinensis HOM05D000300 ORTHO05D008505 1.0e-68 264.6 206 71.4
Gohir.A04G028900 Gossypium hirsutum HOM05D000300 ORTHO05D008505 2.3e-68 263.5 206 70.4
Gohir.D05G358300 Gossypium hirsutum HOM05D000300 ORTHO05D008505 2.3e-68 263.5 206 70.4
Cc05_g12170 Coffea canephora HOM05D000300 ORTHO05D000383 3.9e-68 262.7 206 70.4
MELO3C016520.2 Cucumis melo HOM05D000300 ORTHO05D008505 8.7e-68 261.5 206 69.4
Peaxi162Scf00000g00412 Petunia axillaris HOM05D000300 ORTHO05D008505 8.7e-68 261.5 205 70.2
Prupe.4G183600 Prunus persica HOM05D000300 ORTHO05D008505 1.1e-67 261.2 205 69.3
ClCG10G006870 Citrullus lanatus HOM05D000300 ORTHO05D008505 1.9e-67 260.4 206 68.9
Gorai.009G390800 Gossypium raimondii HOM05D000300 ORTHO05D008505 1.9e-67 260.4 206 69.9
Oeu060546.1 Olea europaea HOM05D000300 ORTHO05D008505 2.5e-67 260.0 205 69.3
CSS0002162 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D008505 5.6e-67 258.8 206 68.4
SalBow7G1295 Salvia bowleyana HOM05D000300 ORTHO05D008505 5.6e-67 258.8 203 71.4
SalBow7G3546 Salvia bowleyana HOM05D000300 ORTHO05D008505 5.6e-67 258.8 203 71.4
Thecc.07G080900 Theobroma cacao HOM05D000300 ORTHO05D008505 5.6e-67 258.8 206 68.9
CsaV3_3G006220 Cucumis sativus L. HOM05D000300 ORTHO05D008505 7.4e-67 258.5 206 68.9
FvH4_3g20100 Fragaria vesca HOM05D000300 ORTHO05D008505 7.4e-67 258.5 202 70.3
Hma1.2p1_1618F.1_g293900 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 7.4e-67 258.5 205 68.3
Migut.M00819 Erythranthe guttata HOM05D000300 ORTHO05D008505 9.6e-67 258.1 202 71.3
QL08p020830 Quercus lobata HOM05D000300 ORTHO05D008505 9.6e-67 258.1 205 67.8
PGSC0003DMG400015358 Solanum tuberosum HOM05D000300 ORTHO05D008505 1.3e-66 257.7 205 69.3
Nn1g06576 Nelumbo nucifera HOM05D000300 ORTHO05D008505 2.1e-66 256.9 205 68.8
Sabra11G0105000 Salix brachista HOM05D000300 ORTHO05D008505 2.1e-66 256.9 206 70.9
FAN11G2262 Fragaria x ananassa HOM05D000300 ORTHO05D008505 2.8e-66 256.5 201 70.1
Atru.chr2.2664 Acer truncatum HOM05D000300 ORTHO05D008505 6.2e-66 255.4 206 68.0
Aqoxy1G02483 Aquilegia oxysepala HOM05D000300 ORTHO05D008505 8.1e-66 255.0 204 69.1
VMungo1080G0699 Vigna mungo HOM05D000300 ORTHO05D008505 1.1e-65 254.6 206 67.5
FAN21G2789 Fragaria x ananassa HOM05D000300 ORTHO05D008505 1.4e-65 254.2 201 69.7
Lj3g0005060 Lotus japonicus HOM05D000300 ORTHO05D008505 1.4e-65 254.2 205 67.8
RcHm_v2.0_Chr5g0033901 Rosa chinensis HOM05D000300 ORTHO05D008505 1.4e-65 254.2 201 69.7
Phvul.005G071500 Phaseolus vulgaris HOM05D000300 ORTHO05D008505 3.1e-65 253.1 206 67.0
PSO541G3772 Papaver somniferum HOM05D000300 ORTHO05D008505 4.0e-65 252.7 206 67.5
THA.LOC104813391 Tarenaya hassleriana HOM05D000300 ORTHO05D008505 4.0e-65 252.7 206 67.0
vmacro11851 Vaccinium macrocarpon HOM05D000300 ORTHO05D008505 6.9e-65 251.9 206 66.5
arahy.Tifrunner.gnm1.ann1.UT5NS3 Arachis hypogaea HOM05D000300 ORTHO05D008505 9.0e-65 251.5 206 67.5
arahy.Tifrunner.gnm1.ann1.Z7GNQ3 Arachis hypogaea HOM05D000300 ORTHO05D008505 9.0e-65 251.5 206 67.5
CANSAT56G2812 Cannabis sativa HOM05D000300 ORTHO05D008505 9.0e-65 251.5 206 67.0
Glyma.12G223300 Glycine max HOM05D000300 ORTHO05D008505 1.2e-64 251.1 206 66.0
Glyma.13G278100 Glycine max HOM05D000300 ORTHO05D008505 1.5e-64 250.8 203 67.0
PSO675G9140 Papaver somniferum HOM05D000300 ORTHO05D008505 1.5e-64 250.8 206 67.0
Haze_09412 Corylus avellana HOM05D000300 ORTHO05D008505 2.0e-64 250.4 205 67.8
Lalb_Chr20g0109791 Lupinus albus HOM05D000300 ORTHO05D008505 2.0e-64 250.4 206 66.5
Medtr2g079460 Medicago truncatula HOM05D000300 ORTHO05D008505 1.3e-63 247.7 206 66.0
Psat3g101080 Pisum sativum HOM05D000300 ORTHO05D008505 3.8e-63 246.1 206 66.0
MD03G1225800 Malus domestica HOM05D000300 ORTHO05D008505 6.4e-63 245.4 206 65.5
Os04g0530300 Oryza sativa ssp. japonica HOM05D000300 ORTHO05D008505 8.4e-63 245.0 204 65.7
unitig_747.g21571 Utricularia gibba HOM05D000300 ORTHO05D008505 8.4e-63 245.0 220 64.1
MD11G1245300 Malus domestica HOM05D000300 ORTHO05D008505 1.9e-62 243.8 205 65.4
PGR031G2267 Punica granatum HOM05D000300 ORTHO05D008505 1.9e-62 243.8 206 66.5
Cpa.g.sc80.49 Carica papaya HOM05D000300 ORTHO05D008505 2.4e-62 243.4 199 66.3
DCAR_013093 Daucus carota HOM05D000300 ORTHO05D008505 2.4e-62 243.4 205 66.3
TPR.G38968 Trifolium pratense HOM05D000300 ORTHO05D008505 3.2e-62 243.0 206 64.6
Thhalv10013922m.g Eutrema salsugineum HOM05D000300 ORTHO05D008505 5.5e-62 242.3 206 64.6
BcaB08g35739 Brassica carinata HOM05D000300 ORTHO05D008505 1.6e-61 240.7 206 64.1
HPP92_025994 Vanilla planifolia HOM05D000300 ORTHO05D008505 2.1e-61 240.4 206 64.6
BcaC04g20418 Brassica carinata HOM05D000300 ORTHO05D008505 4.6e-61 239.2 206 63.6
A10p11170 Brassica napus HOM05D000300 ORTHO05D008505 4.6e-61 239.2 206 63.6
C09p43740 Brassica napus HOM05D000300 ORTHO05D008505 4.6e-61 239.2 206 63.6
BolC9t57259H Brassica oleracea HOM05D000300 ORTHO05D008505 4.6e-61 239.2 206 63.6
BraA10t43209Z Brassica rapa HOM05D000300 ORTHO05D008505 4.6e-61 239.2 206 63.6
Sp6g15870 Schrenkiella parvula HOM05D000300 ORTHO05D008505 1.0e-60 238.0 206 63.1
AL8G28840 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 1.1e-59 234.6 206 64.1
AT5G53800 Arabidopsis thaliana HOM05D000300 ORTHO05D008505 1.1e-59 234.6 206 64.1
Carub.0008s1409 Capsella rubella HOM05D000300 ORTHO05D008505 1.1e-59 234.6 206 63.6
Hma1.2p1_1738F.1_g299980 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 5.6e-59 232.3 205 64.9
ECA240G3136 Erigeron canadensis HOM05D000300 ORTHO05D008505 7.4e-59 231.9 199 66.3
Solyc12g013790.3 Solanum lycopersicum HOM05D000300 ORTHO05D008505 7.4e-59 231.9 205 64.4
Sopen12g007100 Solanum pennellii HOM05D000300 ORTHO05D008505 4.8e-58 229.2 202 64.9
Aa31LG3G10120 Aethionema arabicum HOM05D000300 ORTHO05D008505 6.2e-58 228.8 234 57.3
Nitab4.5_0007374g0020 Nicotiana tabacum HOM05D000300 ORTHO05D008505 6.2e-58 228.8 254 55.9
Rhsim06G0197200 Rhododendron simsii HOM05D000300 ORTHO05D008505 1.8e-57 227.3 165 73.9
Sed0021435 Sechium edule HOM05D000300 ORTHO05D008505 1.8e-57 227.3 206 63.1
Lsat_1_v5_gn_9_97040 Lactuca sativa HOM05D000300 ORTHO05D008505 2.4e-57 226.9 201 64.7
Ca_01834_v3 Cicer arietinum L. HOM05D000300 ORTHO05D008505 2.0e-56 223.8 172 70.9
SEGI_35024 Sequoiadendron giganteum HOM05D000300 ORTHO05D008505 5.8e-56 222.2 199 60.8
CDE02G0965 Ceratophyllum demersum HOM05D000300 ORTHO05D008505 6.5e-55 218.8 163 74.2
Zm00001eb075780 Zea mays HOM05D000300 ORTHO05D008505 8.4e-55 218.4 199 62.3
ATR0680G062 Amborella trichopoda HOM05D000300 ORTHO05D008505 5.5e-54 215.7 206 60.2
Sc16g0006940 Simmondsia chinensis HOM05D000300 ORTHO05D008505 1.0e-52 211.5 230 54.8
HanXRQChr03g0078531 Helianthus annuus HOM05D000300 ORTHO05D008505 1.8e-52 210.7 189 65.1
Mapoly0026s0140 Marchantia polymorpha HOM05D000300 ORTHO05D008505 1.8e-52 210.7 199 57.8
Hund02219 Selenicereus undatus HOM05D000300 ORTHO05D008505 7.4e-51 205.3 202 59.4
Nitab4.5_0000662g0230 Nicotiana tabacum HOM05D000300 ORTHO05D008505 2.8e-50 203.4 226 55.8
MD11G1245600 Malus domestica HOM05D000300 ORTHO05D008505 1.1e-49 201.4 163 68.1
Ah.04g164930 Amaranthus hybridus HOM05D000300 ORTHO05D008505 9.0e-49 198.4 202 56.9
SMO367G0821 Selaginella moellendorffii HOM05D000300 ORTHO05D008505 2.2e-47 193.7 160 65.0
AagrBONN_evm.TU.Sc2ySwM_340.171 Anthoceros agrestis HOM05D000300 ORTHO05D008505 9.3e-46 188.3 201 53.2
FAN16G2347 Fragaria x ananassa HOM05D000300 ORTHO05D008505 2.5e-43 180.3 118 81.4
Pp3c25_13690 Physcomitrium patens HOM05D000300 ORTHO05D008505 4.3e-43 179.5 206 51.0
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 1.8e-41 174.1 164 61.0
AUR62029376 Chenopodium quinoa HOM05D000300 ORTHO05D008505 1.1e-30 138.3 108 70.4
AUR62034261 Chenopodium quinoa HOM05D000300 ORTHO05D008505 3.2e-30 136.7 108 69.4
COL.COLO4_09413 Corchorus olitorius HOM05D000300 ORTHO05D008505 2.3e-28 130.6 93 79.6
EL10Ac4g08146 Beta vulgaris HOM05D000300 ORTHO05D008505 2.6e-27 127.1 127 57.5
Actinidia12817 Actinidia chinensis HOM05D000300 ORTHO05D008505 9.7e-27 125.2 106 62.3
Nn1g04059 Nelumbo nucifera HOM05D000300 ORTHO05D008505 1.1e-22 111.7 117 53.0
FAN25G2371 Fragaria x ananassa HOM05D000300 ORTHO05D008505 1.0e-20 105.1 98 59.2
MD11G1132100 Malus domestica HOM05D000300 ORTHO05D008505 3.3e-19 100.1 101 53.5
Cre03.g176050 Chlamydomonas reinhardtii HOM05D000300 ORTHO05D008505 7.5e-19 99.0 196 35.2
MCO10G111 Micromonas commoda HOM05D000300 ORTHO05D008505 3.7e-18 96.7 207 33.3
GSVIVG01021702001 Vitis vinifera HOM05D000300 ORTHO05D008505 3.7e-18 96.7 78 73.1
AL8G13240 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 1.4e-17 94.7 67 73.1
GSVIVG01021454001 Vitis vinifera HOM05D000300 ORTHO05D008505 2.4e-17 94.0 78 70.5
TAR626G1261 Trochodendron aralioides HOM05D000300 ORTHO05D008505 2.9e-15 87.0 69 72.5
arahy.Tifrunner.gnm1.ann1.MM4FDC Arachis hypogaea HOM05D000300 ORTHO05D008505 3.8e-15 86.7 79 64.6
CBR_g12199 Chara braunii HOM05D000300 ORTHO05D008505 1.9e-14 84.3 99 45.5
FAN25G3258 Fragaria x ananassa HOM05D000300 ORTHO05D008505 4.0e-12 76.6 64 67.2
arahy.Tifrunner.gnm1.ann1.MF7AUF Arachis hypogaea HOM05D003391 ORTHO05D008505 8.3e-10 68.9 40 85.0
arahy.Tifrunner.gnm1.ann1.5AH57W Arachis hypogaea HOM05D000300 ORTHO05D008505 1.4e-09 68.2 51 76.5
arahy.Tifrunner.gnm1.ann1.VIP1CP Arachis hypogaea HOM05D000058 ORTHO05D008505 1.2e-08 65.1 37 78.4
arahy.Tifrunner.gnm1.ann1.1E0HE3 Arachis hypogaea HOM05D001903 ORTHO05D013215 1.3e-07 61.6 39 79.5
arahy.Tifrunner.gnm1.ann1.F96EFF Arachis hypogaea HOM05D003444 ORTHO05D008505 1.3e-07 61.6 64 59.4
GSVIVG01014364001 Vitis vinifera HOM05D000300 ORTHO05D008505 3.8e-07 60.1 45 66.7


User provided reference genes

Program Settings