Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold34G13787 Striga asiatica HOM05D008148 ORTHO05D010295 2.5e-62 241.9 119 100.0
SalBow6G6640 Salvia bowleyana HOM05D008148 ORTHO05D010295 5.5e-17 91.3 55 74.5
SalBow7G3203 Salvia bowleyana HOM05D008148 ORTHO05D010295 5.5e-17 91.3 55 74.5
Oeu059259.1 Olea europaea HOM05D008148 ORTHO05D010295 7.2e-17 90.9 52 76.9
Migut.M00719 Erythranthe guttata HOM05D008148 ORTHO05D010295 2.2e-13 79.3 50 78.0
Cc05_g11020 Coffea canephora HOM05D008148 ORTHO05D010295 4.1e-12 75.1 47 66.0
Potri.011G109100 Populus trichocarpa HOM05D008148 ORTHO05D010295 3.2e-09 65.5 43 65.1
Sabra11G0096700 Salix brachista HOM05D008148 ORTHO05D010295 5.5e-09 64.7 38 71.1
unitig_85.g27419 Utricularia gibba HOM05D055015 ORTHO05D010295 5.5e-09 64.7 72 48.6
unitig_86.g29830 Utricularia gibba HOM05D055015 ORTHO05D010295 5.5e-09 64.7 72 48.6
arahy.Tifrunner.gnm1.ann1.GBF3HF Arachis hypogaea HOM05D008148 ORTHO05D010295 7.2e-09 64.3 54 55.6
Migut.H02001 Erythranthe guttata HOM05D008148 ORTHO05D010295 9.4e-09 63.9 51 60.8
THA.LOC104812318 Tarenaya hassleriana HOM05D008148 ORTHO05D010295 9.4e-09 63.9 40 72.5
TPR.G16053 Trifolium pratense HOM05D008148 ORTHO05D010295 9.4e-09 63.9 38 73.7
Ca_03959_v3 Cicer arietinum L. HOM05D008148 ORTHO05D010295 1.2e-08 63.5 41 65.9
DCAR_013159 Daucus carota HOM05D008148 ORTHO05D010295 2.1e-08 62.8 42 64.3
arahy.Tifrunner.gnm1.ann1.MJJR0W Arachis hypogaea HOM05D008148 ORTHO05D010295 2.7e-08 62.4 46 63.0
FAN21G2680 Fragaria x ananassa HOM05D008148 ORTHO05D010295 6.1e-08 61.2 46 60.9
MD11G1264400 Malus domestica HOM05D008148 ORTHO05D010295 6.1e-08 61.2 46 58.7
Psat5g237240 Pisum sativum HOM05D008148 ORTHO05D010295 6.1e-08 61.2 50 54.0
Prupe.4G164100 Prunus persica HOM05D008148 ORTHO05D010295 6.1e-08 61.2 46 60.9
Lalb_Chr25g0285821 Lupinus albus HOM05D008148 ORTHO05D010295 7.9e-08 60.8 49 55.1
RcHm_v2.0_Chr5g0030781 Rosa chinensis HOM05D008148 ORTHO05D010295 7.9e-08 60.8 46 58.7
Sc03g0010550 Simmondsia chinensis HOM05D008148 ORTHO05D010295 7.9e-08 60.8 56 51.8
FAN11G2091 Fragaria x ananassa HOM05D008148 ORTHO05D010295 1.8e-07 59.7 46 58.7
Lj3g0020996 Lotus japonicus HOM05D008148 ORTHO05D010295 1.8e-07 59.7 46 60.9
Medtr2g076020 Medicago truncatula HOM05D008148 ORTHO05D010295 1.8e-07 59.7 50 56.0
Prupe.4G163600 Prunus persica HOM05D008148 ORTHO05D010295 2.3e-07 59.3 46 58.7
Actinidia12583 Actinidia chinensis HOM05D008148 ORTHO05D010295 3.0e-07 58.9 44 63.6
C08p44200 Brassica napus HOM05D008148 ORTHO05D010295 5.1e-07 58.2 49 53.1
CiPaw.11G159800 Carya illinoinensis HOM05D008148 ORTHO05D010295 5.1e-07 58.2 45 57.8
AT1G16916 Arabidopsis thaliana HOM05D008148 ORTHO05D010295 6.7e-07 57.8 58 48.3
PGR031G2401 Punica granatum HOM05D008148 ORTHO05D010295 6.7e-07 57.8 46 60.9
AL1G29090 Arabidopsis lyrata HOM05D008148 ORTHO05D010295 1.1e-06 57.0 39 59.0
Eucgr.F03276 Eucalyptus grandis HOM05D008148 ORTHO05D010295 1.1e-06 57.0 51 52.9
A09p60700 Brassica napus HOM05D008148 ORTHO05D010295 1.5e-06 56.6 49 51.0
MELO3C025654.2 Cucumis melo HOM05D008148 ORTHO05D010295 2.6e-06 55.8 46 54.3
Glyma.12G230300 Glycine max HOM05D008148 ORTHO05D010295 2.6e-06 55.8 47 57.4
Glyma.13G269300 Glycine max HOM05D008148 ORTHO05D010295 3.3e-06 55.5 46 58.7
Manes.15G095500 Manihot esculenta HOM05D008148 ORTHO05D010295 3.3e-06 55.5 43 60.5
Nn1g04456 Nelumbo nucifera HOM05D008148 ORTHO05D010295 3.3e-06 55.5 54 48.1
GSVIVG01014187001 Vitis vinifera HOM05D008148 ORTHO05D010295 3.3e-06 55.5 43 53.5
Carub.0001s1665 Capsella rubella HOM05D008148 ORTHO05D010295 4.4e-06 55.1 37 59.5
CARHR017420 Cardamine hirsuta HOM05D008148 ORTHO05D010295 4.4e-06 55.1 39 61.5
Aqoxy4G00298 Aquilegia oxysepala HOM05D037719 ORTHO05D031273 5.7e-06 54.7 35 65.7
BraA09t41440Z Brassica rapa HOM05D008148 ORTHO05D010295 5.7e-06 54.7 49 51.0
CSS0001630 Camellia sinensis var. sinensis HOM05D008148 ORTHO05D010295 5.7e-06 54.7 46 56.5
Duzib213G0597 Durio zibethinus HOM05D008148 ORTHO05D010295 5.7e-06 54.7 50 52.0
Sp1g15050 Schrenkiella parvula HOM05D008148 ORTHO05D010295 5.7e-06 54.7 39 59.0
BcaC07g41389 Brassica carinata HOM05D008148 ORTHO05D010295 7.4e-06 54.3 39 59.0
Cpa.g.sc77.20 Carica papaya HOM05D008148 ORTHO05D010295 9.7e-06 53.9 45 64.4
Thecc.07G117800 Theobroma cacao HOM05D008148 ORTHO05D010295 9.7e-06 53.9 46 58.7


User provided reference genes

Program Settings