Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 0.0e+00 1149.0 602 100.0
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 1.8e-233 812.8 609 71.9
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 4.8e-226 788.1 607 68.4
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 1.1e-222 776.9 599 72.1
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 2.5e-219 765.8 620 65.6
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 1.3e-218 763.5 604 67.5
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.6e-218 763.1 607 66.9
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 3.1e-217 758.8 602 66.9
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 1.9e-214 749.6 608 66.8
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 3.0e-212 742.3 605 64.3
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 1.9e-211 739.6 594 65.5
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 2.5e-211 739.2 608 65.1
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 1.3e-210 736.9 610 66.1
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 3.4e-208 728.8 606 65.2
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.3e-207 726.9 603 65.3
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 8.4e-207 724.2 607 66.1
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 2.5e-206 722.6 608 66.8
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 1.6e-205 719.9 604 63.4
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 1.3e-202 710.3 617 61.4
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 2.8e-202 709.1 608 61.7
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 1.0e-199 700.7 610 63.1
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 1.7e-199 699.9 610 63.1
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 1.9e-198 696.4 612 63.1
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 5.1e-196 688.3 593 61.9
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 5.7e-195 684.9 598 58.9
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 6.9e-193 677.9 609 61.2
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 1.5e-192 676.8 630 59.4
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 2.2e-191 672.9 609 58.9
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 1.9e-190 669.8 605 60.3
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 5.5e-190 668.3 606 58.6
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 1.6e-189 666.8 623 58.9
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 5.1e-188 661.8 621 60.1
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 2.0e-187 659.8 605 57.9
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 7.4e-187 657.9 616 56.7
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.2e-186 656.4 614 56.7
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 6.3e-186 654.8 607 59.0
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.8e-185 653.3 614 56.4
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 1.8e-185 653.3 605 59.7
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 5.3e-185 651.7 606 56.3
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 7.0e-185 651.4 624 59.5
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 1.2e-184 650.6 606 56.4
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 1.6e-184 650.2 628 58.6
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 1.6e-184 650.2 627 56.5
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 1.0e-183 647.5 580 57.9
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.3e-183 647.1 607 58.3
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 3.8e-183 645.6 613 57.1
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 2.5e-182 642.9 605 57.5
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 3.2e-182 642.5 538 59.3
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 4.2e-182 642.1 605 57.5
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 9.4e-182 641.0 620 56.8
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 1.1e-179 634.0 615 56.1
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 2.0e-179 633.3 569 59.9
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 4.4e-179 632.1 552 59.8
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 4.4e-179 632.1 610 55.6
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 1.7e-178 630.2 629 53.9
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 2.8e-178 629.4 617 55.9
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 3.7e-178 629.0 615 57.2
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 3.1e-177 625.9 619 55.7
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 1.6e-176 623.6 614 56.4
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 2.0e-176 623.2 613 56.8
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 2.7e-176 622.9 616 54.7
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 5.9e-176 621.7 613 55.8
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 5.9e-176 621.7 618 52.9
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 7.7e-176 621.3 627 56.0
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 1.0e-175 620.9 500 63.2
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 1.7e-175 620.2 614 55.9
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 1.7e-175 620.2 551 59.5
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 2.2e-175 619.8 633 57.3
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 3.8e-175 619.0 617 52.2
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 5.0e-175 618.6 615 55.6
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 6.5e-175 618.2 504 64.5
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 8.5e-175 617.8 614 54.4
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 8.5e-175 617.8 614 54.4
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 1.9e-174 616.7 555 59.5
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 1.9e-174 616.7 575 58.4
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 3.2e-174 615.9 605 53.7
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 2.1e-173 613.2 552 57.8
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 2.7e-173 612.8 605 53.1
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 4.7e-173 612.1 619 55.6
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 8.0e-173 611.3 505 63.0
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 1.5e-171 607.1 480 63.5
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 2.6e-171 606.3 509 61.1
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.7e-170 603.6 621 54.4
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 3.7e-170 602.4 562 57.5
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.1e-169 600.9 572 58.0
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 1.4e-169 600.5 509 60.1
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 3.5e-168 595.9 487 66.1
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 5.9e-168 595.1 502 63.5
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 7.7e-168 594.7 626 51.8
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.0e-167 594.3 614 54.6
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 8.6e-159 564.7 615 52.5
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 2.1e-157 560.1 542 60.3
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 8.9e-156 554.7 620 53.5
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 5.2e-148 528.9 570 48.6
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 1.1e-137 494.6 500 52.0
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 3.9e-135 486.1 437 58.1
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 3.3e-134 483.0 321 67.0
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 9.5e-134 481.5 503 53.3
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 3.2e-129 466.5 634 43.8
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.2e-120 438.0 416 58.9
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 4.5e-99 366.3 357 54.1
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 1.0e-95 355.1 342 58.5
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 2.0e-78 297.7 483 37.1
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 1.6e-48 198.4 278 39.6
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 6.8e-47 193.0 255 41.2
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 3.1e-44 184.1 491 34.2
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 1.0e-42 179.1 239 36.8
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 2.3e-42 177.9 466 32.8
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.8e-31 141.7 92 68.5
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 4.9e-29 133.7 90 65.6
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 1.6e-24 118.6 80 70.0
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 3.4e-22 110.9 74 67.6
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.4e-20 105.5 79 62.0
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 1.0e-18 99.4 58 72.4
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 8.6e-18 96.3 62 69.4
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 8.6e-18 96.3 165 30.9
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 5.8e-14 83.6 45 77.8


User provided reference genes

Program Settings