Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold34G13685 Striga asiatica HOM05D000003 ORTHO05D000006 5.6e-86 320.9 156 100.0
SGA_v2.0_scaffold221G42729 Striga asiatica HOM05D000003 ORTHO05D000006 2.5e-17 92.8 61 67.2
SGA_v2.0_scaffold231G43458 Striga asiatica HOM05D000003 ORTHO05D000006 7.2e-17 91.3 136 39.7
SGA_v2.0_scaffold231G43406 Striga asiatica HOM05D000024 ORTHO05D000006 2.7e-16 89.4 61 63.9
SGA_v2.0_scaffold128G34102 Striga asiatica HOM05D000003 ORTHO05D000006 3.0e-15 85.9 61 60.7
SGA_v2.0_scaffold272G46371 Striga asiatica HOM05D000003 ORTHO05D000006 6.7e-15 84.7 61 60.7
SGA_v2.0_scaffold821G53642 Striga asiatica HOM05D000003 ORTHO05D000006 2.0e-14 83.2 61 59.0
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 3.3e-14 82.4 61 59.0
SGA_v2.0_scaffold83G26411 Striga asiatica HOM05D000003 ORTHO05D000006 1.3e-13 80.5 61 57.4
SGA_v2.0_scaffold30G12507 Striga asiatica HOM05D011952 ORTHO05D000006 1.7e-13 80.1 135 35.6
SGA_v2.0_scaffold47G17612 Striga asiatica HOM05D000003 ORTHO05D000006 2.8e-13 79.3 60 58.3
SGA_v2.0_scaffold56G19930 Striga asiatica HOM05D000003 ORTHO05D000006 2.8e-13 79.3 61 57.4
SGA_v2.0_scaffold231G43427 Striga asiatica HOM05D018498 ORTHO05D000006 1.8e-12 76.6 61 50.8
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 4.1e-12 75.5 60 55.0
SGA_v2.0_scaffold301G47800 Striga asiatica HOM05D000003 ORTHO05D000006 7.0e-12 74.7 55 56.4
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 9.1e-12 74.3 58 58.6
SGA_v2.0_scaffold241G44224 Striga asiatica HOM05D000003 ORTHO05D000006 9.1e-12 74.3 163 30.7
SGA_v2.0_scaffold29G12078 Striga asiatica HOM05D000003 ORTHO05D000006 1.2e-11 73.9 56 57.1
SGA_v2.0_scaffold75G24875 Striga asiatica HOM05D011272 ORTHO05D010636 1.6e-11 73.6 61 54.1
SGA_v2.0_scaffold14G07079 Striga asiatica HOM05D000003 ORTHO05D000006 2.0e-11 73.2 50 66.0
SGA_v2.0_scaffold275G46581 Striga asiatica HOM05D000003 ORTHO05D000004 2.0e-11 73.2 57 56.1
SGA_v2.0_scaffold6G03465 Striga asiatica HOM05D000003 ORTHO05D000006 2.0e-11 73.2 61 54.1
SGA_v2.0_scaffold185G40105 Striga asiatica HOM05D000003 ORTHO05D000006 7.7e-11 71.2 53 58.5
SGA_v2.0_scaffold16G07515 Striga asiatica HOM05D041003 ORTHO05D000006 1.3e-10 70.5 61 50.8
SGA_v2.0_scaffold165G38197 Striga asiatica HOM05D000003 ORTHO05D000006 2.9e-10 69.3 60 48.3
SGA_v2.0_scaffold9G04760 Striga asiatica HOM05D000003 ORTHO05D000006 2.9e-10 69.3 55 50.9
SGA_v2.0_scaffold61G21225 Striga asiatica HOM05D000003 ORTHO05D000006 5.0e-10 68.6 61 49.2
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 6.5e-10 68.2 76 44.7
SGA_v2.0_scaffold67G22780 Striga asiatica HOM05D000003 ORTHO05D000006 6.5e-10 68.2 57 50.9
SGA_v2.0_scaffold139G35393 Striga asiatica HOM05D000003 ORTHO05D000006 8.5e-10 67.8 58 53.4
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 3.2e-09 65.9 58 48.3
SGA_v2.0_scaffold242G44236 Striga asiatica HOM05D000003 ORTHO05D000004 4.2e-09 65.5 82 40.2
SGA_v2.0_scaffold19G08617 Striga asiatica HOM05D000003 ORTHO05D000006 7.2e-09 64.7 57 43.9
SGA_v2.0_scaffold451G51811 Striga asiatica HOM05D058879 ORTHO05D000006 1.2e-08 63.9 147 30.6
SGA_v2.0_scaffold200G41298 Striga asiatica HOM05D000003 ORTHO05D000006 2.1e-08 63.2 56 44.6
Cc04_g12750 Coffea canephora HOM05D000170 ORTHO05D000154 3.6e-08 62.4 54 51.9
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 3.6e-08 62.4 39 64.1
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 4.7e-08 62.0 54 44.4
SGA_v2.0_scaffold47G17523 Striga asiatica HOM05D005949 ORTHO05D006945 6.1e-08 61.6 69 44.9
SGA_v2.0_scaffold321G48586 Striga asiatica HOM05D000003 ORTHO05D000006 1.4e-07 60.5 40 60.0
BcaC09g47652 Brassica carinata HOM05D000003 ORTHO05D000006 1.8e-07 60.1 60 43.3
SGA_v2.0_scaffold1G00690 Striga asiatica HOM05D000003 ORTHO05D000004 2.3e-07 59.7 51 49.0
SGA_v2.0_scaffold185G40079 Striga asiatica HOM05D000003 ORTHO05D000006 5.2e-07 58.5 94 38.3
SGA_v2.0_scaffold43G16292 Striga asiatica HOM05D000003 ORTHO05D000006 8.8e-07 57.8 43 51.2
SGA_v2.0_scaffold99G29516 Striga asiatica HOM05D000003 ORTHO05D000006 1.2e-06 57.4 42 61.9
BcaC03g15337 Brassica carinata HOM05D000003 ORTHO05D000006 2.0e-06 56.6 60 45.0
BolC5t33322H Brassica oleracea HOM05D000003 ORTHO05D024352 3.3e-06 55.8 53 43.4
BcaB02g08512 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-06 55.5 63 44.4
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-06 55.5 60 45.0
Rhsim03G0095700 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.4e-06 55.5 59 40.7
SGA_v2.0_scaffold116G32202 Striga asiatica HOM05D000024 ORTHO05D000006 4.4e-06 55.5 46 52.2
BcaB03g14160 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-06 55.1 58 43.1
BcaC02g12210 Brassica carinata HOM05D000003 ORTHO05D000925 7.5e-06 54.7 82 31.7
Aa31LG9G6670 Aethionema arabicum HOM05D000496 ORTHO05D000411 9.7e-06 54.3 57 42.1
BcaC07g37007 Brassica carinata HOM05D000496 ORTHO05D021670 9.7e-06 54.3 60 45.0


User provided reference genes

Program Settings