Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold34G13625 Striga asiatica HOM05D006130 ORTHO05D007491 1.5e-55 219.2 102 100.0
SGA_v2.0_scaffold47G17703 Striga asiatica HOM05D006130 ORTHO05D007491 2.0e-39 165.6 90 80.0
Migut.L00069 Erythranthe guttata HOM05D006130 ORTHO05D007491 3.2e-34 148.3 90 70.0
MSTRG.15753 Avicennia marina HOM05D006130 ORTHO05D007491 9.4e-34 146.7 88 70.5
Oeu028522.1 Olea europaea HOM05D006130 ORTHO05D007491 2.3e-32 142.1 88 67.0
SalBow5G2487 Salvia bowleyana HOM05D006130 ORTHO05D007491 1.2e-31 139.8 92 67.4
Dinv42687 Davidia involucrata HOM05D006130 ORTHO05D007491 7.5e-31 137.1 88 67.0
Cpa.g.sc191.11 Carica papaya HOM05D006130 ORTHO05D007491 9.1e-29 130.2 88 61.4
Dinv19481 Davidia involucrata HOM05D006130 ORTHO05D007491 2.7e-28 128.6 88 62.5
Cc07_g16320 Coffea canephora HOM05D006130 ORTHO05D007491 3.5e-28 128.3 88 63.6
FAN26G2148 Fragaria x ananassa HOM05D006130 ORTHO05D007491 5.9e-28 127.5 88 63.6
Thecc.01G113900 Theobroma cacao HOM05D006130 ORTHO05D007491 5.9e-28 127.5 88 61.4
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-28 127.1 88 61.4
CAN.G347.1 Capsicum annuum HOM05D006130 ORTHO05D007491 1.0e-27 126.7 88 62.5
QL06p031976 Quercus lobata HOM05D006130 ORTHO05D007491 1.0e-27 126.7 94 57.4
Nitab4.5_0015691g0010 Nicotiana tabacum HOM05D006130 ORTHO05D007491 1.3e-27 126.3 88 64.8
TAR628G0645 Trochodendron aralioides HOM05D006130 ORTHO05D007491 1.3e-27 126.3 88 60.2
FAN23G0816 Fragaria x ananassa HOM05D006130 ORTHO05D007491 2.3e-27 125.6 88 61.4
Rhsim08G0006100 Rhododendron simsii HOM05D006130 ORTHO05D007491 2.3e-27 125.6 88 60.2
PGSC0003DMG400031208 Solanum tuberosum HOM05D006130 ORTHO05D007491 2.3e-27 125.6 88 63.6
Haze_25050 Corylus avellana HOM05D006130 ORTHO05D007491 3.8e-27 124.8 88 59.1
Prupe.6G171600 Prunus persica HOM05D006130 ORTHO05D007491 3.8e-27 124.8 88 61.4
FAN19G1269 Fragaria x ananassa HOM05D006130 ORTHO05D007491 6.5e-27 124.0 88 61.4
CiPaw.04G091300 Carya illinoinensis HOM05D006130 ORTHO05D007491 1.9e-26 122.5 88 59.1
Solyc04g051780.3 Solanum lycopersicum HOM05D006130 ORTHO05D007491 1.9e-26 122.5 88 62.5
Duzib147G1554 Durio zibethinus HOM05D006130 ORTHO05D007491 2.5e-26 122.1 88 55.7
Duzib264G0573 Durio zibethinus HOM05D006130 ORTHO05D007491 2.5e-26 122.1 93 57.0
Sabra07G0067600 Salix brachista HOM05D006130 ORTHO05D007491 2.5e-26 122.1 85 60.0
vmacro18637 Vaccinium macrocarpon HOM05D006130 ORTHO05D007491 2.5e-26 122.1 88 56.8
MBI05_g29098_MAGBIO Magnolia biondii HOM05D006130 ORTHO05D007491 3.3e-26 121.7 91 58.2
Atru.chr4.339 Acer truncatum HOM05D006130 ORTHO05D007491 4.2e-26 121.3 88 59.1
Sopen04g023130 Solanum pennellii HOM05D006130 ORTHO05D007491 4.2e-26 121.3 88 61.4
Gohir.A11G197900 Gossypium hirsutum HOM05D006130 ORTHO05D007491 5.5e-26 120.9 90 56.7
Potri.007G080500 Populus trichocarpa HOM05D006130 ORTHO05D007491 5.5e-26 120.9 84 60.7
Gohir.D11G231600 Gossypium hirsutum HOM05D006130 ORTHO05D007491 7.2e-26 120.6 93 57.0
Cfa002758 Carpinus fangiana HOM05D006130 ORTHO05D007491 9.5e-26 120.2 86 57.0
RcHm_v2.0_Chr2g0117041 Rosa chinensis HOM05D006130 ORTHO05D007491 9.5e-26 120.2 88 56.8
CANSAT80G2857 Cannabis sativa HOM05D006130 ORTHO05D007491 1.2e-25 119.8 88 59.1
ATR0665G503 Amborella trichopoda HOM05D006130 ORTHO05D007491 1.6e-25 119.4 86 57.0
TWI74G0604 Tripterygium wilfordii HOM05D006130 ORTHO05D007491 2.1e-25 119.0 85 58.8
Gorai.007G244700 Gossypium raimondii HOM05D006130 ORTHO05D007491 3.6e-25 118.2 93 55.9
GSVIVG01022231001 Vitis vinifera HOM05D006130 ORTHO05D007491 3.6e-25 118.2 83 61.4
ECA238G3253 Erigeron canadensis HOM05D006130 ORTHO05D007491 6.1e-25 117.5 88 53.4
PSO170G1695 Papaver somniferum HOM05D006130 ORTHO05D007491 8.0e-25 117.1 86 58.1
PSO210G3121 Papaver somniferum HOM05D006130 ORTHO05D007491 8.0e-25 117.1 86 60.5
Peaxi162Scf00106g00208 Petunia axillaris HOM05D006130 ORTHO05D007491 8.0e-25 117.1 81 61.7
Nitab4.5_0004840g0040 Nicotiana tabacum HOM05D006130 ORTHO05D007491 1.0e-24 116.7 81 64.2
GSVIVG01022236001 Vitis vinifera HOM05D006130 ORTHO05D007491 1.0e-24 116.7 83 60.2
Lsat_1_v5_gn_2_67140 Lactuca sativa HOM05D006130 ORTHO05D007491 1.4e-24 116.3 88 56.8
DCAR_001374 Daucus carota HOM05D006130 ORTHO05D007491 1.8e-24 115.9 87 55.2
PGR102G0730 Punica granatum HOM05D006130 ORTHO05D007491 1.8e-24 115.9 91 56.0
Lj2C566T4 Lonicera japonica HOM05D006130 ORTHO05D007491 2.3e-24 115.5 88 59.1
SEGI_25559 Sequoiadendron giganteum HOM05D006130 ORTHO05D007491 2.3e-24 115.5 90 54.4
AUR62003302 Chenopodium quinoa HOM05D006130 ORTHO05D007491 3.0e-24 115.2 88 58.0
CDE09G1360 Ceratophyllum demersum HOM05D006130 ORTHO05D007491 4.0e-24 114.8 88 58.0
Eucgr.H04843 Eucalyptus grandis HOM05D006130 ORTHO05D007491 4.0e-24 114.8 91 52.7
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 4.0e-24 114.8 88 55.7
EL10Ac6g14758 Beta vulgaris HOM05D006130 ORTHO05D007491 6.8e-24 114.0 88 56.8
MELO3C025043.2 Cucumis melo HOM05D006130 ORTHO05D007491 8.9e-24 113.6 93 51.6
MD15G1331600 Malus domestica HOM05D006130 ORTHO05D007491 1.2e-23 113.2 81 59.3
Hund03536 Selenicereus undatus HOM05D006130 ORTHO05D007491 1.2e-23 113.2 88 56.8
Ciclev10026167m.g Citrus clementina HOM05D006130 ORTHO05D007491 1.5e-23 112.8 92 56.5
HanXRQChr14g0445741 Helianthus annuus HOM05D006130 ORTHO05D007491 1.5e-23 112.8 81 56.8
Nn5g28889 Nelumbo nucifera HOM05D006130 ORTHO05D007491 1.5e-23 112.8 95 54.7
Sc03g0004370 Simmondsia chinensis HOM05D006130 ORTHO05D007491 1.5e-23 112.8 86 55.8
AT5G64830 Arabidopsis thaliana HOM05D006130 ORTHO05D007491 2.0e-23 112.5 87 58.6
AUR62016283 Chenopodium quinoa HOM05D006130 ORTHO05D007491 3.4e-23 111.7 88 55.7
Manes.12G143200 Manihot esculenta HOM05D006130 ORTHO05D007491 3.4e-23 111.7 89 53.9
Aqoxy7G04042 Aquilegia oxysepala HOM05D006130 ORTHO05D007491 4.4e-23 111.3 88 59.1
ClCG11G005560 Citrullus lanatus HOM05D006130 ORTHO05D007491 5.7e-23 110.9 88 52.3
Ah.03g141370 Amaranthus hybridus HOM05D006130 ORTHO05D007491 7.5e-23 110.5 88 53.4
CsaV3_6G002440 Cucumis sativus L. HOM05D006130 ORTHO05D007491 1.3e-22 109.8 88 54.5
HPP92_016462 Vanilla planifolia HOM05D006130 ORTHO05D007491 1.7e-22 109.4 88 53.4
AL8G42310 Arabidopsis lyrata HOM05D006130 ORTHO05D007491 2.2e-22 109.0 87 57.5
Carub.0008s2566 Capsella rubella HOM05D006130 ORTHO05D007491 2.2e-22 109.0 87 55.2
Aa31LG1G17100 Aethionema arabicum HOM05D006130 ORTHO05D007491 3.7e-22 108.2 88 53.4
Sp2g27910 Schrenkiella parvula HOM05D006130 ORTHO05D007491 3.7e-22 108.2 87 55.2
unitig_62.g23431 Utricularia gibba HOM05D006130 ORTHO05D007491 3.7e-22 108.2 80 60.0
C03p61330 Brassica napus HOM05D006130 ORTHO05D007491 2.4e-21 105.5 88 55.7
Thhalv10004393m.g Eutrema salsugineum HOM05D006130 ORTHO05D007491 3.1e-21 105.1 87 52.9
BcaC01g02716 Brassica carinata HOM05D006130 ORTHO05D007491 7.0e-21 104.0 87 55.2
BolC3t18393H Brassica oleracea HOM05D006130 ORTHO05D007491 7.0e-21 104.0 87 55.2
BcaB02g09834 Brassica carinata HOM05D006130 ORTHO05D007491 9.2e-21 103.6 87 55.2
A06p31630 Brassica napus HOM05D006130 ORTHO05D007491 9.2e-21 103.6 87 55.2
Eucgr.H04856 Eucalyptus grandis HOM05D006130 ORTHO05D007491 9.2e-21 103.6 91 48.4
Psat5g066000 Pisum sativum HOM05D006130 ORTHO05D007491 9.2e-21 103.6 86 53.5
Sed0017229 Sechium edule HOM05D006130 ORTHO05D007491 9.2e-21 103.6 86 51.2
TPR.G23729 Trifolium pratense HOM05D006130 ORTHO05D007491 9.2e-21 103.6 87 51.7
HPP92_027147 Vanilla planifolia HOM05D006130 ORTHO05D007491 9.2e-21 103.6 81 54.3
Lalb_Chr11g0068091 Lupinus albus HOM05D006130 ORTHO05D007491 1.2e-20 103.2 86 51.2
Eucgr.H04859 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.6e-20 102.8 84 48.8
Actinidia12211 Actinidia chinensis HOM05D006130 ORTHO05D007491 2.0e-20 102.4 71 62.0
BraA06t26099Z Brassica rapa HOM05D006130 ORTHO05D007491 2.0e-20 102.4 87 55.2
CARHR278840 Cardamine hirsuta HOM05D006130 ORTHO05D007491 2.0e-20 102.4 87 54.0
Lj1g0022742 Lotus japonicus HOM05D006130 ORTHO05D007491 2.0e-20 102.4 83 56.6
SMO358G0378 Selaginella moellendorffii HOM05D006130 ORTHO05D007491 2.0e-20 102.4 95 48.4
Eucgr.H04852 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.7e-20 102.1 84 48.8
THA.LOC104818474 Tarenaya hassleriana HOM05D006130 ORTHO05D007491 3.5e-20 101.7 84 54.8
VMungo1309G1738 Vigna mungo HOM05D006130 ORTHO05D007491 3.5e-20 101.7 86 52.3
arahy.Tifrunner.gnm1.ann1.JIC903 Arachis hypogaea HOM05D006130 ORTHO05D007491 1.3e-19 99.8 75 52.0
Ca_16897_v3 Cicer arietinum L. HOM05D006130 ORTHO05D007491 1.3e-19 99.8 85 50.6
Zm00001eb431860 Zea mays HOM05D006130 ORTHO05D007491 1.3e-19 99.8 86 54.7
Medtr3g095020 Medicago truncatula HOM05D006130 ORTHO05D007491 1.7e-19 99.4 86 52.3
AagrBONN_evm.TU.Sc2ySwM_228.1848 Anthoceros agrestis HOM05D006130 ORTHO05D007491 2.3e-19 99.0 86 51.2
arahy.Tifrunner.gnm1.ann1.S5QZ0Z Arachis hypogaea HOM05D006130 ORTHO05D007491 3.8e-19 98.2 75 52.0
Os04g0640800 Oryza sativa ssp. japonica HOM05D006130 ORTHO05D007491 6.6e-19 97.4 83 53.0
Glyma.04G218800 Glycine max HOM05D006130 ORTHO05D007491 1.9e-18 95.9 82 52.4
Eucgr.H04846 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.5e-18 95.5 91 46.2
Phvul.009G139000 Phaseolus vulgaris HOM05D006130 ORTHO05D007491 2.5e-18 95.5 87 48.3
Pp3c16_16240 Physcomitrium patens HOM05D006130 ORTHO05D007491 2.1e-17 92.4 83 45.8
Mapoly0014s0114 Marchantia polymorpha HOM05D006130 ORTHO05D007491 6.1e-17 90.9 84 50.0
CBR_g30690 Chara braunii HOM05D006130 ORTHO05D007491 1.7e-14 82.8 86 43.0
COL.COLO4_11003 Corchorus olitorius HOM05D006130 ORTHO05D007491 4.9e-14 81.3 70 51.4
Ah.14g080600 Amaranthus hybridus HOM05D006130 ORTHO05D007491 1.1e-10 70.1 61 47.5
Hma1.2p1_0375F.1_g138770 Hydrangea macrophylla HOM05D006130 ORTHO05D007491 1.4e-08 63.2 45 60.0
HanXRQChr08g0218711 Helianthus annuus HOM05D006130 ORTHO05D007491 3.1e-08 62.0 53 47.2
MCO11G927 Micromonas commoda HOM05D006130 ORTHO05D007491 1.2e-07 60.1 112 30.4
Oeu028521.1 Olea europaea HOM05D006130 ORTHO05D007491 5.8e-07 57.8 31 74.2


User provided reference genes

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