Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 2.5e-167 593.6 291 100.0
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 9.3e-98 362.5 285 63.9
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 6.7e-88 329.7 292 58.9
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 2.5e-79 301.2 256 59.8
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 5.5e-66 256.9 297 48.5
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 2.6e-63 248.1 312 46.5
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 6.3e-62 243.4 260 52.3
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 2.0e-60 238.4 285 46.0
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 2.2e-59 235.0 253 51.4
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 1.1e-58 232.6 253 51.4
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 1.5e-58 232.3 279 47.0
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 2.3e-56 224.9 240 48.8
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 4.0e-56 224.2 253 47.4
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 1.2e-55 222.6 249 48.2
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 2.6e-55 221.5 244 48.8
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 1.3e-54 219.2 246 46.7
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 1.7e-54 218.8 299 41.8
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 2.8e-54 218.0 314 43.3
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 3.7e-54 217.6 245 47.8
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 3.7e-54 217.6 282 42.9
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 4.8e-54 217.2 245 47.3
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 1.4e-53 215.7 243 44.9
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 1.8e-53 215.3 240 46.2
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 3.1e-53 214.5 299 44.1
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 5.3e-53 213.8 271 43.5
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 5.3e-53 213.8 271 43.5
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 7.0e-53 213.4 247 46.2
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 9.1e-53 213.0 287 44.3
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 1.2e-52 212.6 277 40.1
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 1.6e-52 212.2 243 43.6
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 2.7e-52 211.5 299 41.5
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 5.9e-52 210.3 303 40.6
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 2.2e-51 208.4 230 45.7
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 2.5e-50 204.9 223 48.0
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 2.7e-49 201.4 206 48.1
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 4.7e-49 200.7 293 39.2
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 1.4e-48 199.1 262 42.0
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 2.3e-48 198.4 246 43.5
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 1.2e-47 196.1 257 43.2
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 3.4e-47 194.5 178 55.1
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 1.1e-45 189.5 180 50.0
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 3.1e-45 188.0 220 43.6
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 4.1e-45 187.6 181 53.0
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 5.4e-45 187.2 238 44.1
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 5.4e-45 187.2 256 42.6
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 2.0e-44 185.3 232 40.5
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 2.7e-44 184.9 250 44.0
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 2.7e-44 184.9 181 49.7
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 1.0e-43 183.0 181 50.3
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 1.3e-43 182.6 246 42.3
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 2.3e-43 181.8 181 51.9
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 2.3e-43 181.8 181 48.6
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 2.3e-43 181.8 235 43.0
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 2.9e-43 181.4 247 39.7
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 8.6e-43 179.9 181 48.1
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 1.9e-42 178.7 289 36.7
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 2.8e-41 174.9 170 51.8
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 4.7e-41 174.1 250 41.6
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 6.1e-41 173.7 175 54.3
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 1.8e-40 172.2 181 49.2
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 1.2e-39 169.5 181 47.0
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 2.2e-38 165.2 180 50.0
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 2.2e-38 165.2 181 49.2
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 4.1e-37 161.0 250 38.8
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 1.2e-36 159.5 181 47.5
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 1.2e-36 159.5 181 47.5
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 2.0e-36 158.7 245 37.6
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 2.9e-35 154.8 177 46.9
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 2.9e-35 154.8 193 43.5
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 9.5e-34 149.8 174 46.0
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 9.5e-34 149.8 145 49.7
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 3.6e-33 147.9 245 38.0
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 1.2e-31 142.9 227 40.5
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 1.5e-31 142.5 139 52.5
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 7.0e-29 133.7 140 47.1
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 4.3e-26 124.4 109 56.0
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 5.6e-26 124.0 111 57.7
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 1.4e-24 119.4 147 42.2
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 9.8e-23 113.2 127 48.8
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 1.3e-22 112.8 113 49.6
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 1.2e-20 106.3 84 60.7
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 7.8e-20 103.6 107 46.7
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 1.7e-19 102.4 84 56.0
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 3.0e-19 101.7 181 35.9
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 9.5e-18 96.7 74 63.5
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 1.2e-17 96.3 77 55.8
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 1.4e-16 92.8 78 52.6
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 3.1e-16 91.7 78 51.3
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 6.8e-16 90.5 148 37.8
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 1.2e-15 89.7 87 52.9
Migut.I00272 Erythranthe guttata HOM05D007595 ORTHO05D009570 7.5e-15 87.0 93 47.3
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 9.9e-15 86.7 113 38.9
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 1.7e-14 85.9 73 52.1
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 6.8e-08 63.9 46 58.7
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 1.2e-07 63.2 68 45.6
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 1.5e-07 62.8 104 43.3
Nn1g03517 Nelumbo nucifera HOM05D002890 ORTHO05D009847 2.0e-07 62.4 212 25.9
ATR0665G577 Amborella trichopoda HOM05D007595 ORTHO05D009570 3.4e-07 61.6 73 38.4
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 4.4e-07 61.2 207 23.2
TAR624G0355 Trochodendron aralioides HOM05D002890 ORTHO05D009847 9.9e-07 60.1 207 26.1
Lalb_Chr01g0001971 Lupinus albus HOM05D002890 ORTHO05D009847 1.3e-06 59.7 97 35.1
arahy.Tifrunner.gnm1.ann1.H4NKJU Arachis hypogaea HOM05D000104 ORTHO05D009920 1.7e-06 59.3 202 21.8
MBI05_g05281_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D009847 1.7e-06 59.3 222 27.9
Os10g0147250 Oryza sativa ssp. japonica HOM05D011046 ORTHO05D013342 1.7e-06 59.3 69 43.5
Potri.014G056400 Populus trichocarpa HOM05D000104 ORTHO05D009920 1.7e-06 59.3 195 23.6
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 2.2e-06 58.9 54 53.7
Psat3g158640 Pisum sativum HOM05D000104 ORTHO05D009920 2.2e-06 58.9 196 21.9
Ca_23477_v3 Cicer arietinum L. HOM05D000104 ORTHO05D009920 3.8e-06 58.2 112 30.4
Thhalv10007116m.g Eutrema salsugineum HOM05D007545 ORTHO05D009579 3.8e-06 58.2 239 23.8
arahy.Tifrunner.gnm1.ann1.JWX42Q Arachis hypogaea HOM05D000104 ORTHO05D009920 4.9e-06 57.8 202 21.8
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 4.9e-06 57.8 209 24.4
TPR.G23654 Trifolium pratense HOM05D007545 ORTHO05D009579 4.9e-06 57.8 256 22.7
Haze_20537 Corylus avellana HOM05D002890 ORTHO05D009847 8.4e-06 57.0 207 24.6


User provided reference genes

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