Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 1.4e-96 356.3 176 100.0
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 6.4e-38 161.4 182 52.2
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 7.8e-28 127.9 137 48.2
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 2.3e-27 126.3 136 44.1
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 5.1e-27 125.2 122 45.9
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 6.6e-27 124.8 177 43.5
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 2.5e-26 122.9 141 42.6
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 3.3e-26 122.5 152 44.1
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 4.3e-26 122.1 169 43.8
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 5.6e-26 121.7 120 47.5
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 9.6e-26 120.9 119 45.4
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 2.8e-25 119.4 154 38.3
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 2.8e-25 119.4 108 53.7
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 6.2e-25 118.2 133 46.6
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 1.4e-24 117.1 139 42.4
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.8e-24 116.7 152 41.4
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 1.8e-24 116.7 152 41.4
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 5.2e-24 115.2 140 40.0
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 5.2e-24 115.2 112 45.5
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 1.2e-23 114.0 140 40.0
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 1.5e-23 113.6 109 45.0
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 2.6e-23 112.8 162 39.5
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 2.6e-23 112.8 140 38.6
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 2.6e-23 112.8 146 40.4
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 3.4e-23 112.5 162 40.7
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 3.4e-23 112.5 140 42.9
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 3.4e-23 112.5 148 39.2
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 4.4e-23 112.1 112 43.8
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 4.4e-23 112.1 140 39.3
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 7.6e-23 111.3 143 41.3
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.3e-22 110.5 152 40.1
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 2.9e-22 109.4 140 38.6
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 4.9e-22 108.6 146 39.0
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 8.4e-22 107.8 144 40.3
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 8.4e-22 107.8 160 36.2
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 1.1e-21 107.5 148 37.2
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 1.9e-21 106.7 154 38.3
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 1.9e-21 106.7 151 37.1
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 1.9e-21 106.7 124 42.7
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 2.4e-21 106.3 125 42.4
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 5.4e-21 105.1 112 44.6
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 5.4e-21 105.1 127 40.9
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 7.1e-21 104.8 108 45.4
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 9.3e-21 104.4 113 41.6
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 9.3e-21 104.4 127 44.9
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 1.6e-20 103.6 130 40.8
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 3.5e-20 102.4 120 45.0
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 6.0e-20 101.7 130 40.0
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 1.3e-19 100.5 113 40.7
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 2.3e-19 99.8 140 37.1
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 2.3e-19 99.8 98 44.9
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 2.3e-19 99.8 132 36.4
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 3.9e-19 99.0 144 34.7
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 8.7e-19 97.8 132 40.9
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 1.1e-18 97.4 116 41.4
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.5e-18 97.1 128 42.2
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 3.3e-18 95.9 116 41.4
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 5.6e-18 95.1 125 34.4
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 7.3e-18 94.7 175 32.6
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 7.3e-18 94.7 106 39.6
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 9.6e-18 94.4 156 36.5
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 1.3e-17 94.0 129 40.3
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 1.6e-17 93.6 136 33.1
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 2.1e-17 93.2 131 38.9
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 2.1e-17 93.2 131 38.9
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 3.6e-17 92.4 137 33.6
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 3.6e-17 92.4 129 39.5
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 3.6e-17 92.4 129 39.5
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 4.8e-17 92.0 124 37.1
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 6.2e-17 91.7 128 35.2
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 3.1e-16 89.4 122 37.7
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 4.0e-16 89.0 125 35.2
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 4.0e-16 89.0 97 38.1
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 4.0e-16 89.0 97 38.1
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 4.0e-16 89.0 124 35.5
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 5.3e-16 88.6 128 35.9
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 6.9e-16 88.2 119 34.5
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 1.5e-15 87.0 150 34.0
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 3.4e-15 85.9 179 27.9
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 5.8e-15 85.1 97 41.2
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 5.8e-15 85.1 126 38.1
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 7.6e-15 84.7 118 38.1
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.7e-14 83.6 100 43.0
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 6.4e-14 81.6 163 28.8
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 6.4e-14 81.6 87 46.0
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 8.4e-14 81.3 134 32.8
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 1.1e-13 80.9 92 43.5
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 1.2e-12 77.4 80 46.2
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 3.5e-12 75.9 123 37.4
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 4.6e-12 75.5 68 42.6
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 2.3e-11 73.2 62 46.8
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 5.1e-11 72.0 68 44.1
ATR0144G021 Amborella trichopoda HOM05D007716 ORTHO05D009780 2.2e-06 56.6 50 42.0


User provided reference genes

Program Settings