Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold341G49383 Striga asiatica HOM05D017425 ORTHO05D019383 1.9e-178 629.0 317 100.0
SGA_v2.0_scaffold240G44139 Striga asiatica HOM05D017425 ORTHO05D019383 6.8e-147 524.2 316 82.6
SGA_v2.0_scaffold326G48722 Striga asiatica HOM05D017425 ORTHO05D019383 6.8e-147 524.2 316 82.6
SGA_v2.0_scaffold32G13121 Striga asiatica HOM05D017425 ORTHO05D019383 6.8e-147 524.2 316 82.6
SGA_v2.0_scaffold21G09397 Striga asiatica HOM05D017425 ORTHO05D019383 1.6e-143 513.1 316 83.5
SGA_v2.0_scaffold41G15799 Striga asiatica HOM05D017425 ORTHO05D019383 4.4e-130 468.4 292 79.8
SGA_v2.0_scaffold116G32293 Striga asiatica HOM05D017425 ORTHO05D019383 7.5e-114 414.5 316 69.3
SGA_v2.0_scaffold416G51226 Striga asiatica HOM05D017425 ORTHO05D019383 3.9e-110 402.1 303 71.3
DCAR_017370 Daucus carota HOM05D002069 ORTHO05D001421 9.8e-13 78.6 249 24.1
SGA_v2.0_scaffold309G48185 Striga asiatica HOM05D002069 ORTHO05D002997 4.6e-10 69.7 255 23.1
DCAR_024115 Daucus carota HOM05D010768 ORTHO05D010791 2.5e-08 63.9 252 25.0
Lsat_1_v5_gn_4_60840 Lactuca sativa HOM05D005502 ORTHO05D001421 5.6e-08 62.8 232 22.8
AUR62008492 Chenopodium quinoa HOM05D007817 ORTHO05D010493 1.2e-07 61.6 151 27.2
AUR62018056 Chenopodium quinoa HOM05D007817 ORTHO05D010493 1.6e-07 61.2 151 27.2
DCAR_024114 Daucus carota HOM05D002069 ORTHO05D001421 1.6e-07 61.2 248 21.4
HanXRQChr07g0191861 Helianthus annuus HOM05D002069 ORTHO05D001421 1.6e-07 61.2 157 26.8
DCAR_001467 Daucus carota HOM05D002069 ORTHO05D001421 2.1e-07 60.8 248 21.8
Lsat_1_v5_gn_6_93140 Lactuca sativa HOM05D005502 ORTHO05D001421 2.8e-07 60.5 232 22.4
DCAR_001468 Daucus carota HOM05D002069 ORTHO05D001421 4.7e-07 59.7 254 25.6
HanXRQChr04g0112951 Helianthus annuus HOM05D002069 ORTHO05D001421 4.7e-07 59.7 254 24.8
HanXRQChr11g0351751 Helianthus annuus HOM05D002069 ORTHO05D001421 4.7e-07 59.7 254 24.8
EL10Ac7g17236 Beta vulgaris HOM05D002461 ORTHO05D000898 8.9e-06 55.5 203 23.6
Lsat_1_v5_gn_5_166541 Lactuca sativa HOM05D005502 ORTHO05D001421 8.9e-06 55.5 232 20.7


User provided reference genes

Program Settings