Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold341G49359 Striga asiatica HOM05D001952 ORTHO05D005047 2.0e-167 592.4 311 100.0
SalBow3G3659 Salvia bowleyana HOM05D001952 ORTHO05D005047 1.9e-141 506.1 311 83.6
MSTRG.8150 Avicennia marina HOM05D001952 ORTHO05D005047 9.0e-136 487.3 311 78.5
MSTRG.27460 Avicennia marina HOM05D001952 ORTHO05D005047 2.2e-134 482.6 300 79.7
Sopen04g018690 Solanum pennellii HOM05D001952 ORTHO05D005047 3.2e-133 478.8 301 77.7
CAN.G4.5 Capsicum annuum HOM05D001952 ORTHO05D005047 2.7e-132 475.7 301 76.7
Peaxi162Scf00272g00023 Petunia axillaris HOM05D001952 ORTHO05D005047 2.7e-132 475.7 297 78.5
Solyc04g049180.3 Solanum lycopersicum HOM05D001952 ORTHO05D005047 4.6e-132 474.9 301 77.1
CiPaw.01G274000 Carya illinoinensis HOM05D001952 ORTHO05D005047 3.9e-131 471.9 311 76.5
QL08p056315 Quercus lobata HOM05D001952 ORTHO05D005047 2.5e-130 469.2 310 74.8
CSS0043642 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 1.3e-129 466.8 311 75.9
TWI38G1551 Tripterygium wilfordii HOM05D001952 ORTHO05D005047 2.1e-129 466.1 311 75.6
Migut.F02000 Erythranthe guttata HOM05D001952 ORTHO05D005047 4.8e-129 464.9 311 76.8
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 3.4e-127 458.8 307 73.6
RcHm_v2.0_Chr1g0363681 Rosa chinensis HOM05D001952 ORTHO05D005047 3.4e-127 458.8 311 74.3
Ciclev10032201m.g Citrus clementina HOM05D001952 ORTHO05D005047 5.8e-127 458.0 307 73.0
Prupe.8G142500 Prunus persica HOM05D001952 ORTHO05D005047 1.0e-126 457.2 311 75.2
FAN10G0547 Fragaria x ananassa HOM05D001952 ORTHO05D005047 1.7e-126 456.4 311 74.0
MD07G1176100 Malus domestica HOM05D001952 ORTHO05D005047 1.7e-126 456.4 311 75.6
TWI15G0762 Tripterygium wilfordii HOM05D001952 ORTHO05D005047 1.7e-126 456.4 311 73.3
FvH4_7g19770 Fragaria vesca HOM05D001952 ORTHO05D005047 2.9e-126 455.7 311 73.6
Actinidia38268 Actinidia chinensis HOM05D001952 ORTHO05D005047 3.8e-126 455.3 311 74.0
FAN03G1754 Fragaria x ananassa HOM05D001952 ORTHO05D005047 6.4e-126 454.5 311 73.3
GSVIVG01016297001 Vitis vinifera HOM05D001952 ORTHO05D005047 1.1e-125 453.8 314 74.2
Dinv11786 Davidia involucrata HOM05D001952 ORTHO05D007415 1.4e-125 453.4 300 75.3
Potri.010G220900 Populus trichocarpa HOM05D001952 ORTHO05D005047 1.4e-125 453.4 303 74.3
Lj1C916T4 Lonicera japonica HOM05D001952 ORTHO05D005047 2.5e-125 452.6 312 73.4
MELO3C002900.2 Cucumis melo HOM05D001952 ORTHO05D005047 3.2e-125 452.2 311 73.0
FAN01G0922 Fragaria x ananassa HOM05D001952 ORTHO05D005047 3.2e-125 452.2 309 72.8
Actinidia03051 Actinidia chinensis HOM05D001952 ORTHO05D005047 4.2e-125 451.8 302 76.2
Nitab4.5_0001352g0010 Nicotiana tabacum HOM05D001952 ORTHO05D005047 9.3e-125 450.7 300 75.0
Hma1.2p1_0063F.1_g034440 Hydrangea macrophylla HOM05D001952 ORTHO05D005047 1.2e-124 450.3 313 73.5
CsaV3_5G025750 Cucumis sativus L. HOM05D001952 ORTHO05D005047 1.6e-124 449.9 311 72.3
Rhsim03G0124200 Rhododendron simsii HOM05D001952 ORTHO05D005047 1.0e-123 447.2 307 73.3
Thecc.10G071300 Theobroma cacao HOM05D001952 ORTHO05D005047 1.3e-123 446.8 305 72.1
Duzib106G0378 Durio zibethinus HOM05D001952 ORTHO05D005047 6.7e-123 444.5 306 70.9
Rhsim09G0040900 Rhododendron simsii HOM05D001952 ORTHO05D005047 6.7e-123 444.5 302 73.2
Nitab4.5_0000233g0070 Nicotiana tabacum HOM05D001952 ORTHO05D005047 8.7e-123 444.1 310 72.6
Gohir.D04G003200 Gossypium hirsutum HOM05D001952 ORTHO05D005047 3.3e-122 442.2 306 71.9
Gorai.012G004300 Gossypium raimondii HOM05D001952 ORTHO05D005047 3.3e-122 442.2 306 71.9
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 3.3e-122 442.2 314 71.0
CANSAT56G1702 Cannabis sativa HOM05D001952 ORTHO05D005047 4.3e-122 441.8 311 71.1
Oeu043934.2 Olea europaea HOM05D001952 ORTHO05D005047 5.6e-122 441.4 267 79.0
Manes.07G104300 Manihot esculenta HOM05D001952 ORTHO05D005047 1.3e-121 440.3 312 73.1
Sc20g0001940 Simmondsia chinensis HOM05D001952 ORTHO05D005047 2.1e-121 439.5 314 71.3
Hund12040 Selenicereus undatus HOM05D001952 ORTHO05D005047 2.8e-121 439.1 310 71.6
Gohir.A05G412900 Gossypium hirsutum HOM05D001952 ORTHO05D005047 6.2e-121 438.0 306 71.2
Gohir.A10G207000 Gossypium hirsutum HOM05D001952 ORTHO05D005047 6.2e-121 438.0 306 70.9
THA.LOC104809877 Tarenaya hassleriana HOM05D001952 ORTHO05D005047 1.4e-120 436.8 306 70.3
DCAR_006448 Daucus carota HOM05D001952 ORTHO05D005047 1.8e-120 436.4 348 67.0
Sed0013357 Sechium edule HOM05D001952 ORTHO05D005047 5.3e-120 434.9 311 69.5
Atru.chr12.731 Acer truncatum HOM05D001952 ORTHO05D005047 9.0e-120 434.1 306 71.2
Gohir.D10G215100 Gossypium hirsutum HOM05D001952 ORTHO05D005047 9.0e-120 434.1 306 70.6
unitig_0.g2136 Utricularia gibba HOM05D001952 ORTHO05D005047 1.2e-119 433.7 301 72.4
TAR623G1191 Trochodendron aralioides HOM05D001952 ORTHO05D005047 1.5e-119 433.3 315 69.5
CSS0010121 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 2.0e-119 433.0 304 72.4
Lalb_Chr01g0010101 Lupinus albus HOM05D001952 ORTHO05D005047 2.0e-119 433.0 311 70.7
Gorai.011G240600 Gossypium raimondii HOM05D001952 ORTHO05D005047 2.6e-119 432.6 306 70.3
TAR633G1943 Trochodendron aralioides HOM05D001952 ORTHO05D005047 5.8e-119 431.4 315 69.8
HanXRQChr09g0246441 Helianthus annuus HOM05D001952 ORTHO05D005047 1.3e-118 430.3 308 70.8
Potri.008G041100 Populus trichocarpa HOM05D001952 ORTHO05D005047 2.2e-118 429.5 303 71.6
PGR044G1956 Punica granatum HOM05D001952 ORTHO05D005047 2.2e-118 429.5 311 69.8
Sabra10G0170600 Salix brachista HOM05D001952 ORTHO05D005047 2.9e-118 429.1 338 66.6
Lsat_1_v5_gn_9_68641 Lactuca sativa HOM05D001952 ORTHO05D005047 1.1e-117 427.2 310 69.0
ClCG09G020640 Citrullus lanatus HOM05D001952 ORTHO05D005047 5.5e-117 424.9 359 63.0
vmacro07078 Vaccinium macrocarpon HOM05D001952 ORTHO05D005047 5.5e-117 424.9 311 69.8
ECA232G3999 Erigeron canadensis HOM05D001952 ORTHO05D005047 7.1e-117 424.5 314 69.1
PSO339G2303 Papaver somniferum HOM05D001952 ORTHO05D005047 2.7e-116 422.5 315 69.2
Phvul.007G093800 Phaseolus vulgaris HOM05D001952 ORTHO05D005047 1.0e-115 420.6 297 68.7
MBI07_g41454_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 1.8e-115 419.9 300 70.3
VMungo0464G0347 Vigna mungo HOM05D001952 ORTHO05D005047 1.8e-115 419.9 311 68.2
Nn2g10756 Nelumbo nucifera HOM05D001952 ORTHO05D005047 2.3e-115 419.5 311 67.5
PSO384G3798 Papaver somniferum HOM05D001952 ORTHO05D005047 3.0e-115 419.1 316 70.6
Phvul.004G071600 Phaseolus vulgaris HOM05D001952 ORTHO05D005047 3.0e-115 419.1 311 67.8
arahy.Tifrunner.gnm1.ann1.BF0W30 Arachis hypogaea HOM05D001952 ORTHO05D005047 6.7e-115 417.9 301 69.8
CARHR082690 Cardamine hirsuta HOM05D001952 ORTHO05D005047 8.7e-115 417.5 306 68.0
AUR62036746 Chenopodium quinoa HOM05D001952 ORTHO05D005047 8.7e-115 417.5 311 67.2
Eucgr.J01098 Eucalyptus grandis HOM05D001952 ORTHO05D005047 8.7e-115 417.5 308 68.5
Aqoxy7G02906 Aquilegia oxysepala HOM05D001952 ORTHO05D005047 1.1e-114 417.2 313 68.4
arahy.Tifrunner.gnm1.ann1.GFW5PY Arachis hypogaea HOM05D001952 ORTHO05D005047 1.1e-114 417.2 301 69.8
PSO063G6730 Papaver somniferum HOM05D001952 ORTHO05D005047 1.9e-114 416.4 313 69.0
Carub.0003s0752 Capsella rubella HOM05D001952 ORTHO05D005047 2.5e-114 416.0 306 67.0
Glyma.16G145700 Glycine max HOM05D001952 ORTHO05D005047 4.3e-114 415.2 311 68.8
Aa31LG5G18490 Aethionema arabicum HOM05D001952 ORTHO05D005047 9.7e-114 414.1 307 68.1
AT3G07950 Arabidopsis thaliana HOM05D001952 ORTHO05D005047 9.7e-114 414.1 306 66.7
BcaC09g47964 Brassica carinata HOM05D001952 ORTHO05D005047 9.7e-114 414.1 305 66.6
Glyma.02G064500 Glycine max HOM05D001952 ORTHO05D005047 9.7e-114 414.1 311 68.8
Lj2g0017031 Lotus japonicus HOM05D001952 ORTHO05D005047 9.7e-114 414.1 311 65.6
Cpa.g.sc53.62 Carica papaya HOM05D001952 ORTHO05D005047 1.6e-113 413.3 298 70.1
A05p40310 Brassica napus HOM05D001952 ORTHO05D005047 2.2e-113 412.9 309 66.0
AL3G19330 Arabidopsis lyrata HOM05D001952 ORTHO05D005047 2.8e-113 412.5 306 66.3
arahy.Tifrunner.gnm1.ann1.I356LV Arachis hypogaea HOM05D001952 ORTHO05D005047 2.8e-113 412.5 310 67.1
BolC1t05516H Brassica oleracea HOM05D001952 ORTHO05D005047 2.8e-113 412.5 298 67.1
ATR0115G026 Amborella trichopoda HOM05D001952 ORTHO05D005047 6.3e-113 411.4 293 71.3
PSO339G4598 Papaver somniferum HOM05D001952 ORTHO05D005047 6.3e-113 411.4 316 69.3
BcaC05g29583 Brassica carinata HOM05D001952 ORTHO05D005047 8.2e-113 411.0 306 66.0
C05p59390 Brassica napus HOM05D001952 ORTHO05D005047 1.1e-112 410.6 306 66.0
COL.COLO4_23705 Corchorus olitorius HOM05D001952 ORTHO05D005047 1.1e-112 410.6 388 57.5
TPR.G36683 Trifolium pratense HOM05D001952 ORTHO05D005047 1.4e-112 410.2 301 68.1
EL10Ac1g02054 Beta vulgaris HOM05D001952 ORTHO05D005047 2.4e-112 409.5 349 62.5
Sp3g06860 Schrenkiella parvula HOM05D001952 ORTHO05D005047 2.4e-112 409.5 306 66.0
BolC5t34594H Brassica oleracea HOM05D001952 ORTHO05D005047 3.1e-112 409.1 298 67.4
Lj5g0021726 Lotus japonicus HOM05D001952 ORTHO05D005047 4.1e-112 408.7 309 65.4
Ah.11g040520 Amaranthus hybridus HOM05D001952 ORTHO05D005047 5.3e-112 408.3 307 68.4
Sabra08G0027900 Salix brachista HOM05D001952 ORTHO05D005047 5.3e-112 408.3 342 64.9
BcaB04g21262 Brassica carinata HOM05D001952 ORTHO05D005047 9.0e-112 407.5 305 65.2
Medtr1g095490 Medicago truncatula HOM05D001952 ORTHO05D005047 2.0e-111 406.4 297 67.0
Thhalv10021192m.g Eutrema salsugineum HOM05D001952 ORTHO05D005047 7.7e-111 404.4 311 64.6
Glyma.10G212100 Glycine max HOM05D001952 ORTHO05D005047 6.5e-110 401.4 289 67.8
Lsat_1_v5_gn_8_19940 Lactuca sativa HOM05D001952 ORTHO05D005047 2.5e-109 399.4 306 66.3
HPP92_014675 Vanilla planifolia HOM05D001952 ORTHO05D005047 5.5e-109 398.3 304 64.8
BcaB03g11556 Brassica carinata HOM05D000484 ORTHO05D005047 7.2e-109 397.9 288 67.4
Psat6g185440 Pisum sativum HOM05D001952 ORTHO05D005047 7.2e-109 397.9 297 65.0
CSS0012304 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 6.1e-108 394.8 260 75.4
TPR.G1807 Trifolium pratense HOM05D001952 ORTHO05D005047 7.9e-108 394.4 292 65.4
CiPaw.02G174800 Carya illinoinensis HOM05D001952 ORTHO05D005047 1.8e-107 393.3 275 70.9
Gorai.013G026100 Gossypium raimondii HOM05D001952 ORTHO05D005047 3.0e-107 392.5 303 65.7
Duzib114G0604 Durio zibethinus HOM05D001952 ORTHO05D005047 6.7e-107 391.3 272 69.9
Gohir.D13G023300 Gossypium hirsutum HOM05D001952 ORTHO05D005047 5.7e-106 388.3 303 65.7
AUR62013854 Chenopodium quinoa HOM05D001952 ORTHO05D005047 7.4e-106 387.9 277 68.6
FAN06G0112 Fragaria x ananassa HOM05D001952 ORTHO05D005047 2.8e-105 386.0 258 72.9
Os07g0655400 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 2.0e-103 379.8 301 62.8
Zm00001eb110580 Zea mays HOM05D001952 ORTHO05D005047 4.5e-103 378.6 310 64.2
SEGI_02403 Sequoiadendron giganteum HOM05D001952 ORTHO05D005047 1.9e-101 373.2 306 60.1
Os03g0358200 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 2.5e-101 372.9 290 66.2
Cc09_g01990 Coffea canephora HOM05D001952 ORTHO05D005047 4.2e-101 372.1 245 75.9
Dinv31333 Davidia involucrata HOM05D001952 ORTHO05D005047 2.1e-100 369.8 308 64.0
CDE10G0691 Ceratophyllum demersum HOM05D001952 ORTHO05D005047 2.0e-98 363.2 306 60.5
Zm00001eb394380 Zea mays HOM05D001952 ORTHO05D005047 1.6e-92 343.6 278 61.9
Mapoly0066s0031 Marchantia polymorpha HOM05D001952 ORTHO05D005047 4.5e-87 325.5 304 54.6
SalBow4G0807 Salvia bowleyana HOM05D001952 ORTHO05D005047 3.2e-85 319.3 304 58.6
AagrBONN_evm.TU.Sc2ySwM_344.4977 Anthoceros agrestis HOM05D001952 ORTHO05D005047 9.4e-85 317.8 300 54.7
unitig_736.g22520 Utricularia gibba HOM05D001952 ORTHO05D005047 2.3e-83 313.2 279 57.7
ATR0559G188 Amborella trichopoda HOM05D001952 ORTHO05D005047 3.0e-83 312.8 294 55.4
Pp3c16_4780 Physcomitrium patens HOM05D001952 ORTHO05D005047 2.8e-81 306.2 292 54.8
Pp3c27_5280 Physcomitrium patens HOM05D001952 ORTHO05D005047 1.0e-78 297.7 311 50.5
Gohir.A13G024400 Gossypium hirsutum HOM05D001952 ORTHO05D005047 6.5e-78 295.0 231 65.8
SMO140G0041 Selaginella moellendorffii HOM05D001952 ORTHO05D005047 7.2e-77 291.6 298 52.7
Os04g0103300 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 1.2e-76 290.8 281 51.6
SHI07338 Sapria himalayana HOM05D001952 ORTHO05D005047 1.6e-76 290.4 272 58.5
Zm00001eb017450 Zea mays HOM05D001952 ORTHO05D005047 2.0e-74 283.5 250 60.8
Zm00001eb089590 Zea mays HOM05D001952 ORTHO05D005047 9.8e-74 281.2 278 50.0
Zm00001eb418910 Zea mays HOM05D001952 ORTHO05D005047 1.3e-73 280.8 295 48.8
arahy.Tifrunner.gnm1.ann1.1JAQ89 Arachis hypogaea HOM05D001952 ORTHO05D005047 1.2e-68 264.2 204 64.2
unitig_747.g21458 Utricularia gibba HOM05D001952 ORTHO05D005047 1.3e-65 254.2 182 68.7
Oeu052143.1 Olea europaea HOM05D001952 ORTHO05D005047 1.4e-64 250.8 147 79.6
MBI17_g17186_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 2.4e-64 250.0 328 49.1
Nn2g10413 Nelumbo nucifera HOM05D001952 ORTHO05D005047 7.0e-64 248.4 246 52.4
ECA233G5952 Erigeron canadensis HOM05D001952 ORTHO05D005047 1.8e-59 233.8 189 63.5
Lalb_Chr19g0129631 Lupinus albus HOM05D001952 ORTHO05D005047 2.3e-59 233.4 196 63.3
arahy.Tifrunner.gnm1.ann1.RZKK0D Arachis hypogaea HOM05D001952 ORTHO05D005047 4.9e-57 225.7 208 57.2
CBR_g52157 Chara braunii HOM05D001952 ORTHO05D005047 1.9e-56 223.8 210 55.2
Migut.F01769 Erythranthe guttata HOM05D001952 ORTHO05D005047 7.8e-55 218.4 150 72.7
TAR633G1124 Trochodendron aralioides HOM05D002354 ORTHO05D002469 1.0e-54 218.0 249 47.4
MD01G1110300 Malus domestica HOM05D001952 ORTHO05D005047 2.1e-52 210.3 150 70.0
Cre17.g706850 Chlamydomonas reinhardtii HOM05D001952 ORTHO05D005047 3.9e-46 189.5 295 38.0
MCO03G295 Micromonas commoda HOM05D001952 ORTHO05D005047 4.9e-33 146.0 278 33.1
arahy.Tifrunner.gnm1.ann1.1BY4XL Arachis hypogaea HOM05D001952 ORTHO05D005047 1.3e-28 131.3 105 64.8
MCO07G038 Micromonas commoda HOM05D001952 ORTHO05D005047 1.6e-28 131.0 328 28.4
PRCOL_00004972 Prasinoderma coloniale HOM05D001952 ORTHO05D005047 4.2e-24 116.3 275 30.5
Ca_12760_v3 Cicer arietinum L. HOM05D001952 ORTHO05D005047 1.7e-22 110.9 114 50.0
Nn1g06899 Nelumbo nucifera HOM05D001952 ORTHO05D005047 3.0e-22 110.2 76 72.4
Cfa025342 Carpinus fangiana HOM05D001952 ORTHO05D005047 3.9e-22 109.8 289 30.8
arahy.Tifrunner.gnm1.ann1.PMPU7Y Arachis hypogaea HOM05D001952 ORTHO05D005047 9.6e-21 105.1 126 50.0
PRCOL_00006255 Prasinoderma coloniale HOM05D000177 ORTHO05D002683 1.2e-18 98.2 289 29.4
MBI19_g20119_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 9.6e-13 78.6 185 35.7
CBR_g52155 Chara braunii HOM05D001952 ORTHO05D134355 3.8e-09 66.6 59 45.8
unitig_747.g21459 Utricularia gibba HOM05D001952 ORTHO05D005047 6.5e-09 65.9 40 77.5


User provided reference genes

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