Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold340G49332 Striga asiatica HOM05D006213 ORTHO05D008107 2.0e-197 692.2 345 100.0
Migut.B01508 Erythranthe guttata HOM05D006213 ORTHO05D008107 5.1e-132 474.9 503 54.9
MSTRG.20674 Avicennia marina HOM05D006213 ORTHO05D008107 1.9e-126 456.4 503 52.9
SGA_v2.0_scaffold52G19244 Striga asiatica HOM05D006213 ORTHO05D008107 1.1e-123 447.2 472 56.8
SalBow5G4694 Salvia bowleyana HOM05D006213 ORTHO05D008107 2.6e-120 436.0 503 50.9
Oeu037443.2 Olea europaea HOM05D006213 ORTHO05D008107 1.8e-108 396.7 477 49.9
CAN.G1585.8 Capsicum annuum HOM05D006213 ORTHO05D008107 2.3e-108 396.4 497 48.1
Solyc01g089900.4 Solanum lycopersicum HOM05D006213 ORTHO05D008107 4.4e-107 392.1 499 46.7
Dinv44047 Davidia involucrata HOM05D006213 ORTHO05D008107 8.2e-106 387.9 497 46.1
Glyma.03G108200 Glycine max HOM05D006213 ORTHO05D008107 1.4e-105 387.1 504 46.2
HanXRQChr17g0562541 Helianthus annuus HOM05D006213 ORTHO05D008107 7.0e-105 384.8 496 46.2
arahy.Tifrunner.gnm1.ann1.SKJX1Q Arachis hypogaea HOM05D006213 ORTHO05D008107 9.1e-105 384.4 495 45.5
RcHm_v2.0_Chr1g0346061 Rosa chinensis HOM05D006213 ORTHO05D008107 9.1e-105 384.4 499 45.7
MBI04_g13842_MAGBIO Magnolia biondii HOM05D006213 ORTHO05D008107 1.6e-104 383.6 502 45.2
PGR042G3832 Punica granatum HOM05D006213 ORTHO05D008107 1.6e-104 383.6 498 46.2
QL04p029079 Quercus lobata HOM05D006213 ORTHO05D008107 2.0e-104 383.3 505 45.9
CiPaw.13G025000 Carya illinoinensis HOM05D006213 ORTHO05D008107 4.5e-104 382.1 499 45.3
Gorai.004G166900 Gossypium raimondii HOM05D006213 ORTHO05D008107 1.0e-103 380.9 498 45.6
Phvul.010G045600 Phaseolus vulgaris HOM05D006213 ORTHO05D008107 1.0e-103 380.9 504 46.2
Gohir.A08G139600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 3.8e-103 379.0 498 45.4
Lalb_Chr12g0210581 Lupinus albus HOM05D006213 ORTHO05D008107 3.8e-103 379.0 498 45.0
Medtr8g007345 Medicago truncatula HOM05D006213 ORTHO05D008107 5.0e-103 378.6 500 44.8
ECA234G2079 Erigeron canadensis HOM05D006213 ORTHO05D008107 1.1e-102 377.5 496 44.8
Gohir.D08G160600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 1.5e-102 377.1 498 45.2
Thecc.01G397800 Theobroma cacao HOM05D006213 ORTHO05D008107 1.9e-102 376.7 498 44.8
Ciclev10019843m.g Citrus clementina HOM05D006213 ORTHO05D008107 4.2e-102 375.6 499 44.3
Nn1g00791 Nelumbo nucifera HOM05D006213 ORTHO05D008107 1.2e-101 374.0 477 45.5
Duzib133G0253 Durio zibethinus HOM05D006213 ORTHO05D008107 4.7e-101 372.1 491 45.4
Psat4g223120 Pisum sativum HOM05D006213 ORTHO05D008107 6.1e-101 371.7 498 44.0
Lsat_1_v5_gn_4_39261 Lactuca sativa HOM05D006213 ORTHO05D008107 8.0e-101 371.3 487 46.0
FAN06G2734 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.5e-99 367.1 514 43.0
FAN06G3851 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.5e-99 367.1 514 43.0
FAN06G4345 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.5e-99 367.1 514 43.0
Prupe.2G122100 Prunus persica HOM05D006213 ORTHO05D008107 1.5e-99 367.1 476 45.2
Potri.002G139200 Populus trichocarpa HOM05D006213 ORTHO05D008107 2.0e-99 366.7 498 43.0
FAN03G1287 Fragaria x ananassa HOM05D006213 ORTHO05D008107 9.7e-99 364.4 513 42.7
TWI14G1148 Tripterygium wilfordii HOM05D006213 ORTHO05D008107 9.7e-99 364.4 501 44.9
EL10Ac1g00745 Beta vulgaris HOM05D006213 ORTHO05D008107 2.2e-98 363.2 422 49.3
ClCG06G000670 Citrullus lanatus HOM05D006213 ORTHO05D008107 4.8e-98 362.1 497 44.1
Carub.0001s0002 Capsella rubella HOM05D006213 ORTHO05D008107 8.2e-98 361.3 499 43.9
Manes.05G056250 Manihot esculenta HOM05D006213 ORTHO05D008107 8.2e-98 361.3 490 44.1
Eucgr.E01545 Eucalyptus grandis HOM05D006213 ORTHO05D008107 1.4e-97 360.5 498 43.2
CsaV3_6G006460 Cucumis sativus L. HOM05D006213 ORTHO05D008107 1.8e-97 360.1 499 43.9
Sed0013772 Sechium edule HOM05D006213 ORTHO05D008107 1.8e-97 360.1 499 44.5
GSVIVG01018298001 Vitis vinifera HOM05D006213 ORTHO05D008107 2.4e-97 359.8 477 45.7
Peaxi162Scf00853g00316 Petunia axillaris HOM05D006213 ORTHO05D008107 4.1e-97 359.0 493 44.6
FvH4_7g09360 Fragaria vesca HOM05D006213 ORTHO05D008107 5.9e-96 355.1 499 43.3
Aqoxy3G02673 Aquilegia oxysepala HOM05D006213 ORTHO05D008107 8.5e-95 351.3 501 41.7
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 1.5e-94 350.5 523 43.4
CARHR000180 Cardamine hirsuta HOM05D006213 ORTHO05D008107 1.9e-94 350.1 499 42.9
Actinidia30939 Actinidia chinensis HOM05D006213 ORTHO05D008107 3.2e-94 349.4 479 46.1
A10p00090 Brassica napus HOM05D006213 ORTHO05D008107 4.2e-94 349.0 492 43.1
Sc23g0004890 Simmondsia chinensis HOM05D006213 ORTHO05D008107 4.2e-94 349.0 500 42.8
BraA10t42287Z Brassica rapa HOM05D006213 ORTHO05D008107 5.5e-94 348.6 492 43.1
CDE02G2871 Ceratophyllum demersum HOM05D006213 ORTHO05D008107 7.2e-94 348.2 485 42.3
COL.COLO4_12385 Corchorus olitorius HOM05D006213 ORTHO05D008107 7.2e-94 348.2 474 45.8
PSO017G1536 Papaver somniferum HOM05D006213 ORTHO05D008107 7.2e-94 348.2 491 43.4
AL1G10080 Arabidopsis lyrata HOM05D006213 ORTHO05D008107 1.2e-93 347.4 499 42.3
Lj3g0010513 Lotus japonicus HOM05D006213 ORTHO05D008107 1.6e-93 347.1 481 44.9
C05p00060 Brassica napus HOM05D006213 ORTHO05D008107 2.1e-93 346.7 492 42.9
BolC5t28793H Brassica oleracea HOM05D006213 ORTHO05D008107 2.1e-93 346.7 492 42.9
ATR0665G630 Amborella trichopoda HOM05D006213 ORTHO05D008107 6.1e-93 345.1 491 43.4
AUR62013761 Chenopodium quinoa HOM05D006213 ORTHO05D008107 1.0e-92 344.4 529 40.8
Sp1g00110 Schrenkiella parvula HOM05D006213 ORTHO05D008107 1.8e-92 343.6 499 42.7
PSO837G0013 Papaver somniferum HOM05D006213 ORTHO05D008107 4.0e-92 342.4 491 42.6
vmacro13511 Vaccinium macrocarpon HOM05D006213 ORTHO05D008107 4.0e-92 342.4 614 38.1
THA.LOC104814061 Tarenaya hassleriana HOM05D006213 ORTHO05D008107 7.5e-91 338.2 504 42.3
Sabra02G0108400 Salix brachista HOM05D006213 ORTHO05D008107 9.8e-91 337.8 549 38.4
Sabra02G0108200 Salix brachista HOM05D006213 ORTHO05D008107 2.2e-90 336.7 549 38.3
BraA09t42282Z Brassica rapa HOM05D006213 ORTHO05D008107 8.3e-90 334.7 502 41.4
Aa31LG1G11550 Aethionema arabicum HOM05D006213 ORTHO05D008107 7.0e-89 331.6 529 39.3
CANSAT25G1963 Cannabis sativa HOM05D006213 ORTHO05D008107 1.3e-87 327.4 503 39.6
BcaC07g42440 Brassica carinata HOM05D006213 ORTHO05D008107 1.7e-87 327.0 499 40.1
BcaB03g13635 Brassica carinata HOM05D006213 ORTHO05D008107 3.8e-87 325.9 472 41.5
PGSC0003DMG402031172 Solanum tuberosum HOM05D006213 ORTHO05D008107 8.5e-87 324.7 284 63.0
MD07G1098100 Malus domestica HOM05D006213 ORTHO05D008107 1.9e-86 323.6 421 46.6
MELO3C022474.2 Cucumis melo HOM05D006213 ORTHO05D008107 2.5e-86 323.2 448 44.0
Os04g0544900 Oryza sativa ssp. japonica HOM05D006213 ORTHO05D008107 2.5e-86 323.2 495 39.6
TPR.G32127 Trifolium pratense HOM05D006213 ORTHO05D008107 2.5e-86 323.2 524 40.6
HPP92_020680 Vanilla planifolia HOM05D006213 ORTHO05D008107 3.2e-86 322.8 489 41.7
Hund17106 Selenicereus undatus HOM05D006213 ORTHO05D008107 4.2e-86 322.4 478 42.9
Cc02_g25210 Coffea canephora HOM05D006213 ORTHO05D008107 1.6e-85 320.5 286 62.9
Thhalv10007459m.g Eutrema salsugineum HOM05D006213 ORTHO05D008107 1.3e-82 310.8 418 45.2
AT1G02145 Arabidopsis thaliana HOM05D006213 ORTHO05D008107 4.9e-82 308.9 449 41.2
TAR374G1216 Trochodendron aralioides HOM05D006213 ORTHO05D008107 3.1e-81 306.2 287 60.6
Sopen01g035740 Solanum pennellii HOM05D006213 ORTHO05D008107 4.1e-81 305.8 417 44.8
Zm00001eb075160 Zea mays HOM05D006213 ORTHO05D008107 3.8e-79 299.3 488 38.1
Glyma.07G119300 Glycine max HOM05D006213 ORTHO05D008107 2.1e-77 293.5 398 43.7
A09p69370 Brassica napus HOM05D006213 ORTHO05D008107 3.6e-77 292.7 503 38.0
unitig_8.g3848 Utricularia gibba HOM05D006213 ORTHO05D008107 8.0e-77 291.6 447 43.6
BolC8t52928H Brassica oleracea HOM05D006213 ORTHO05D008107 2.9e-74 283.1 492 37.8
Lj2g0022411 Lotus japonicus HOM05D006213 ORTHO05D008107 6.4e-74 282.0 395 42.3
AUR62023393 Chenopodium quinoa HOM05D006213 ORTHO05D008107 3.0e-71 273.1 503 36.6
FAN10G1434 Fragaria x ananassa HOM05D006213 ORTHO05D008107 6.6e-71 271.9 435 38.6
AagrBONN_evm.TU.Sc2ySwM_344.5349 Anthoceros agrestis HOM05D006213 ORTHO05D008107 1.1e-65 254.6 489 34.6
VMungo0331G0117 Vigna mungo HOM05D006213 ORTHO05D008107 1.1e-65 254.6 274 55.5
Mapoly0044s0100 Marchantia polymorpha HOM05D006213 ORTHO05D008107 3.0e-63 246.5 492 34.1
Haze_02866 Corylus avellana HOM05D006213 ORTHO05D008107 1.1e-60 238.0 507 36.3
FAN01G1024 Fragaria x ananassa HOM05D006213 ORTHO05D008107 4.4e-59 232.6 205 62.0
Pp3c18_21620 Physcomitrium patens HOM05D006213 ORTHO05D008107 7.5e-59 231.9 488 32.0
Lj9A554T27 Lonicera japonica HOM05D006213 ORTHO05D008107 2.2e-58 230.3 298 47.3
SHI13624 Sapria himalayana HOM05D006213 ORTHO05D008107 4.3e-54 216.1 235 52.8
Rhsim07G0037600 Rhododendron simsii HOM05D006213 ORTHO05D008107 2.1e-53 213.8 366 39.6
FAN06G1264 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.4e-49 201.1 200 57.5
SMO117G0345 Selaginella moellendorffii HOM05D006213 ORTHO05D008107 1.5e-46 191.0 236 45.8
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 7.1e-41 172.2 196 51.5
BcaC07g42336 Brassica carinata HOM05D006213 ORTHO05D008107 2.5e-38 163.7 461 29.7
MCO12G031 Micromonas commoda HOM05D006213 ORTHO05D008107 1.7e-26 124.4 321 33.6
Atru.chr5.108 Acer truncatum HOM05D006213 ORTHO05D008107 1.9e-25 120.9 201 39.3
Cc02_g25230 Coffea canephora HOM05D006213 ORTHO05D008107 3.2e-25 120.2 125 48.0
Sabra02G0107000 Salix brachista HOM05D006213 ORTHO05D008107 2.1e-24 117.5 373 25.5
Ca_14798_v3 Cicer arietinum L. HOM05D006213 ORTHO05D008107 9.6e-22 108.6 120 55.0
PRCOL_00003622 Prasinoderma coloniale HOM05D006213 ORTHO05D008107 2.8e-21 107.1 282 31.6
Psat4g223040 Pisum sativum HOM05D006213 ORTHO05D008107 1.1e-17 95.1 80 62.5
DCAR_029492 Daucus carota HOM05D006213 ORTHO05D008107 3.3e-14 83.6 83 51.8
DCAR_029493 Daucus carota HOM05D006213 ORTHO05D008107 1.3e-13 81.6 65 63.1
SEGI_13726 Sequoiadendron giganteum HOM05D006213 ORTHO05D008107 1.0e-10 72.0 81 48.1
SHI13625 Sapria himalayana HOM05D006213 ORTHO05D008107 1.7e-10 71.2 91 40.7
arahy.Tifrunner.gnm1.ann1.RXQ5U4 Arachis hypogaea HOM05D006213 ORTHO05D008107 1.4e-09 68.2 151 31.1
Atru.chr5.109 Acer truncatum HOM05D006213 ORTHO05D000044 1.9e-09 67.8 94 40.4
Psat5g245640 Pisum sativum HOM05D000300 ORTHO05D000383 3.2e-09 67.0 49 63.3


User provided reference genes

Program Settings