Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 1.9e-206 722.2 362 100.0
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 2.3e-114 416.4 372 61.3
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 1.5e-113 413.7 366 60.9
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 7.1e-108 394.8 381 57.7
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 2.6e-94 349.7 374 53.7
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.3e-93 347.4 372 51.6
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 4.9e-93 345.5 375 52.3
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 6.4e-93 345.1 411 47.9
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 8.4e-93 344.7 372 52.4
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 5.6e-89 332.0 378 50.3
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 1.8e-87 327.0 368 49.2
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 5.3e-87 325.5 369 48.8
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 1.2e-86 324.3 367 50.1
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 5.8e-86 322.0 344 52.3
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 7.6e-86 321.6 372 48.9
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 2.2e-85 320.1 378 49.2
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.9e-84 317.0 376 46.8
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 1.9e-84 317.0 382 49.5
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 4.2e-84 315.8 376 48.7
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 7.1e-84 315.1 383 49.3
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 9.3e-84 314.7 353 51.8
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 1.0e-82 311.2 372 48.4
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 1.0e-82 311.2 366 48.4
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 2.3e-82 310.1 374 48.4
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 1.9e-81 307.0 377 48.0
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 4.3e-81 305.8 365 48.8
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 5.6e-81 305.4 374 47.6
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 5.6e-81 305.4 369 49.6
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 5.6e-81 305.4 369 46.6
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 1.3e-80 304.3 373 46.1
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 2.1e-80 303.5 377 47.2
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 2.1e-80 303.5 365 48.5
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 2.8e-80 303.1 375 47.2
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 3.7e-80 302.8 376 46.8
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 1.1e-79 301.2 348 50.6
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 3.1e-79 299.7 372 47.8
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 5.3e-79 298.9 373 46.1
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 1.2e-78 297.7 367 47.7
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 2.6e-78 296.6 368 48.6
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 2.6e-78 296.6 382 44.8
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 3.4e-78 296.2 304 52.3
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 1.4e-76 290.8 375 46.4
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 1.9e-76 290.4 447 40.3
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 2.4e-76 290.0 304 48.0
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 3.2e-76 289.7 360 47.8
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 3.2e-76 289.7 359 49.6
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 4.2e-76 289.3 369 45.3
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 5.5e-76 288.9 304 47.7
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 9.3e-76 288.1 361 46.0
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 1.6e-75 287.3 369 45.0
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.6e-75 287.3 369 45.3
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 3.5e-75 286.2 372 46.0
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 1.0e-74 284.6 304 48.0
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.3e-74 284.3 369 45.0
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 1.8e-74 283.9 368 43.2
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 3.0e-74 283.1 352 45.5
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 6.7e-74 282.0 356 46.3
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 1.9e-73 280.4 357 44.0
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 4.3e-73 279.3 304 46.4
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 5.6e-73 278.9 380 42.9
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 1.3e-72 277.7 320 43.8
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 1.6e-72 277.3 300 47.3
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 3.7e-72 276.2 367 43.3
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 4.8e-72 275.8 304 47.4
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.1e-71 274.6 374 44.4
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 1.4e-71 274.2 299 46.5
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 2.4e-71 273.5 380 42.4
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 4.0e-71 272.7 369 44.2
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 2.0e-70 270.4 386 43.5
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 3.4e-70 269.6 304 46.4
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 5.8e-70 268.9 299 45.8
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 3.8e-69 266.2 386 40.9
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 2.5e-68 263.5 361 44.6
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 3.5e-67 259.6 272 52.2
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 4.6e-67 259.2 363 41.0
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 1.0e-66 258.1 304 44.7
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 3.0e-66 256.5 390 40.3
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 4.3e-65 252.7 383 41.8
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 5.0e-61 239.2 372 42.7
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 1.9e-60 237.3 387 41.9
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 4.2e-60 236.1 369 39.8
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 5.5e-60 235.7 351 40.5
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 7.2e-60 235.3 438 37.9
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.1e-57 228.0 352 40.9
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 4.5e-54 216.1 240 50.4
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 1.1e-52 211.5 223 51.6
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 5.7e-49 199.1 250 47.6
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 3.7e-48 196.4 186 55.9
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 4.8e-48 196.1 312 41.0
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 6.3e-48 195.7 251 48.2
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 2.4e-47 193.7 174 54.6
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 1.9e-44 184.1 364 38.7
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 2.8e-40 170.2 261 42.1
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 3.1e-39 166.8 361 31.6
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 3.5e-38 163.3 227 42.7
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 7.7e-38 162.2 183 48.1
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 4.4e-33 146.4 276 33.3
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.8e-31 141.0 248 36.3
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 1.8e-26 124.4 124 51.6
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 8.8e-26 122.1 176 39.2
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 5.5e-20 102.8 334 28.1
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 4.7e-19 99.8 116 44.8
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 4.4e-17 93.2 226 31.0
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 2.2e-16 90.9 114 43.0
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 4.9e-16 89.7 114 43.0
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 2.8e-11 73.9 189 28.6
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 3.6e-11 73.6 55 56.4
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 2.3e-10 70.9 43 83.7
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 1.3e-08 65.1 254 24.4
Os11g0565400 Oryza sativa ssp. japonica HOM05D006946 ORTHO05D008634 2.9e-08 63.9 45 60.0
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 2.9e-08 63.9 106 37.7
PRCOL_00003801 Prasinoderma coloniale HOM05D013257 ORTHO05D015313 4.9e-08 63.2 195 27.2
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.9e-07 61.2 246 27.2
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 2.4e-07 60.8 37 64.9
HPP92_022101 Vanilla planifolia HOM05D006946 ORTHO05D008634 2.4e-07 60.8 46 56.5
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 5.4e-07 59.7 89 38.2
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 9.2e-07 58.9 81 38.3


User provided reference genes

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