Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 1.1e-161 573.2 280 100.0
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 2.5e-113 412.5 291 72.5
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 3.8e-109 398.7 300 67.3
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 4.2e-108 395.2 298 70.5
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 3.9e-106 388.7 281 72.2
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 5.0e-93 345.1 299 62.5
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 4.2e-92 342.0 291 63.9
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 1.2e-91 340.5 300 61.7
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 3.0e-90 335.9 286 65.0
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 5.1e-90 335.1 291 63.9
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 6.7e-90 334.7 291 63.9
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 8.8e-90 334.3 289 62.3
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 3.3e-89 332.4 303 61.1
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 9.7e-89 330.9 302 62.3
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 9.7e-89 330.9 294 63.6
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 6.3e-88 328.2 300 61.0
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.4e-87 327.0 299 60.5
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 1.8e-87 326.6 299 60.5
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 2.4e-87 326.2 299 60.2
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 3.1e-87 325.9 305 61.6
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 4.1e-87 325.5 289 62.3
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 5.3e-87 325.1 303 60.1
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 5.3e-87 325.1 311 59.8
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 9.1e-87 324.3 297 62.0
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 1.5e-86 323.6 282 63.1
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 2.0e-86 323.2 299 59.9
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 2.0e-86 323.2 270 63.0
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 5.9e-86 321.6 299 60.9
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 7.7e-86 321.2 294 60.9
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 1.7e-85 320.1 310 59.0
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 2.2e-85 319.7 293 60.8
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 6.5e-85 318.2 308 58.8
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 8.5e-85 317.8 301 61.8
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 8.5e-85 317.8 292 63.4
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 1.9e-84 316.6 278 61.2
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 1.9e-84 316.6 312 59.0
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 1.9e-84 316.6 288 61.8
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 2.5e-84 316.2 298 58.7
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 2.5e-84 316.2 297 59.9
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 3.2e-84 315.8 287 61.3
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 3.2e-84 315.8 303 59.4
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 4.2e-84 315.5 295 58.0
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 5.5e-84 315.1 276 62.3
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 9.4e-84 314.3 283 59.7
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 9.4e-84 314.3 301 58.8
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 1.2e-83 313.9 290 60.3
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.6e-83 313.5 294 57.1
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.6e-83 313.5 283 61.1
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 2.1e-83 313.2 288 57.6
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 2.1e-83 313.2 298 58.7
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 2.7e-83 312.8 346 52.6
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 3.6e-83 312.4 288 57.6
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 3.6e-83 312.4 299 58.9
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 4.7e-83 312.0 298 60.4
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 6.1e-83 311.6 294 60.5
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 1.0e-82 310.8 296 59.5
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 1.4e-82 310.5 293 59.7
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 2.3e-82 309.7 308 58.4
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 3.9e-82 308.9 304 56.9
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 8.8e-82 307.8 300 59.7
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 8.8e-82 307.8 306 57.5
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 1.1e-81 307.4 300 55.0
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 1.5e-81 307.0 318 56.3
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 3.3e-81 305.8 290 61.0
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 3.3e-81 305.8 281 58.0
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 3.3e-81 305.8 268 63.1
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 7.4e-81 304.7 316 55.1
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 9.7e-81 304.3 276 60.9
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 9.7e-81 304.3 303 57.1
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 1.7e-80 303.5 267 60.3
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 1.7e-80 303.5 302 58.3
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 2.2e-80 303.1 291 57.0
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 3.7e-80 302.4 272 59.6
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 3.7e-80 302.4 259 62.9
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 4.8e-80 302.0 302 57.0
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 2.0e-78 296.6 280 59.3
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 1.0e-77 294.3 272 58.8
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 6.5e-77 291.6 294 56.5
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 9.4e-76 287.7 292 54.8
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 9.4e-76 287.7 267 57.3
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 2.3e-74 283.1 333 52.6
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 3.9e-74 282.3 304 54.9
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 3.9e-74 282.3 292 55.1
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 6.7e-74 281.6 296 54.7
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 8.8e-74 281.2 292 55.5
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.8e-71 273.5 335 50.4
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 4.1e-71 272.3 301 53.5
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.6e-70 269.6 335 49.9
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 3.5e-70 269.2 301 53.2
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 4.5e-70 268.9 315 49.8
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 7.7e-70 268.1 292 53.8
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 5.0e-69 265.4 294 52.0
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 4.0e-66 255.8 300 53.0
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 5.2e-66 255.4 343 47.2
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 8.3e-64 248.1 289 49.5
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 7.0e-63 245.0 242 56.2
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 7.7e-62 241.5 295 48.1
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 2.2e-56 223.4 231 54.5
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.9e-52 210.3 195 59.0
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.2e-51 207.6 175 64.6
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.3e-50 203.4 179 60.9
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 5.2e-50 202.2 157 66.2
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 3.7e-48 196.1 172 65.1
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 1.8e-47 193.7 305 41.0
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 2.7e-46 189.9 306 43.5
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 3.5e-46 189.5 147 67.3
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 4.6e-46 189.1 157 65.6
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.3e-44 183.0 141 67.4
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 4.7e-43 179.1 172 57.0
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 2.3e-42 176.8 202 51.5
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 2.4e-39 166.8 206 47.6
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.2e-39 166.4 146 61.6
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 5.6e-36 155.6 287 37.6
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 1.2e-35 154.5 98 75.5
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 3.6e-35 152.9 267 37.5
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 4.0e-34 149.4 266 36.5
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 2.6e-33 146.7 104 72.1
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 1.1e-31 141.4 109 66.1
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 1.1e-31 141.4 307 36.5
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 3.2e-31 139.8 103 70.9
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 1.3e-29 134.4 99 71.7
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 8.4e-24 115.2 122 54.9
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 1.1e-23 114.8 84 70.2
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 4.1e-23 112.8 268 33.6
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 9.2e-23 111.7 98 63.3
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 1.2e-19 101.3 82 70.7
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 8.9e-18 95.1 84 64.3
SGA_v2.0_scaffold6G03195 Striga asiatica HOM05D057815 ORTHO05D006946 7.6e-17 92.0 77 64.9
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 6.4e-16 89.0 289 31.8
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 7.8e-14 82.0 78 56.4
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 7.3e-12 75.5 62 54.8
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 1.6e-11 74.3 89 49.4
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 6.9e-10 68.9 269 26.4


User provided reference genes

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