Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold340G49302 Striga asiatica HOM05D005355 ORTHO05D006591 2.4e-70 268.9 148 100.0
SGA_v2.0_scaffold122G33176 Striga asiatica HOM05D005355 ORTHO05D006591 2.8e-39 165.6 146 70.5
MSTRG.326 Avicennia marina HOM05D005355 ORTHO05D006591 1.4e-30 136.7 146 59.6
Migut.F01876 Erythranthe guttata HOM05D005355 ORTHO05D006591 1.2e-26 123.6 145 56.6
unitig_52.g17510 Utricularia gibba HOM05D005355 ORTHO05D006467 5.4e-22 108.2 89 58.4
Nitab4.5_0001803g0130 Nicotiana tabacum HOM05D005355 ORTHO05D006591 2.3e-17 92.8 146 45.9
CAN.G127.21 Capsicum annuum HOM05D005355 ORTHO05D006591 4.0e-17 92.0 147 51.0
Oeu062052.1 Olea europaea HOM05D005355 ORTHO05D006591 5.2e-17 91.7 145 44.1
Hund27026 Selenicereus undatus HOM05D005355 ORTHO05D006591 3.4e-16 89.0 130 46.2
Sc01g0001210 Simmondsia chinensis HOM05D005355 ORTHO05D006591 3.4e-16 89.0 130 46.9
EL10Ac1g01045 Beta vulgaris HOM05D005355 ORTHO05D006591 4.4e-16 88.6 97 53.6
GSVIVG01008886001 Vitis vinifera HOM05D005355 ORTHO05D006591 5.8e-16 88.2 129 48.8
Sopen11g007660 Solanum pennellii HOM05D005355 ORTHO05D006591 1.3e-15 87.0 146 46.6
Nn5g28219 Nelumbo nucifera HOM05D005355 ORTHO05D006591 3.7e-15 85.5 129 46.5
Haze_00460 Corylus avellana HOM05D005355 ORTHO05D006591 1.1e-14 84.0 131 44.3
Manes.18G076200 Manihot esculenta HOM05D005355 ORTHO05D006591 1.4e-14 83.6 129 46.5
Solyc11g012920.3 Solanum lycopersicum HOM05D005355 ORTHO05D006591 1.4e-14 83.6 146 45.9
TWI12G0790 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 3.2e-14 82.4 130 46.2
Eucgr.F04357 Eucalyptus grandis HOM05D005355 ORTHO05D006591 4.1e-14 82.0 142 44.4
CSS0023513 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.2e-13 80.5 123 47.2
Cpa.g.sc36.50 Carica papaya HOM05D005355 ORTHO05D006591 1.2e-13 80.5 131 44.3
AUR62019052 Chenopodium quinoa HOM05D005355 ORTHO05D006591 1.6e-13 80.1 71 53.5
Cc00_g04310 Coffea canephora HOM05D005355 ORTHO05D006591 3.5e-13 79.0 146 39.7
Dinv27329 Davidia involucrata HOM05D005355 ORTHO05D006591 3.5e-13 79.0 132 45.5
MBI06_g20714_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 4.6e-13 78.6 145 43.4
Sabra05G0133000 Salix brachista HOM05D005355 ORTHO05D006591 7.8e-13 77.8 129 46.5
CSS0006134 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.0e-12 77.4 116 47.4
Lj4A622G14 Lonicera japonica HOM05D005355 ORTHO05D006591 1.0e-12 77.4 118 48.3
Duzib093G2154 Durio zibethinus HOM05D005355 ORTHO05D006591 1.3e-12 77.0 136 43.4
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.3e-12 77.0 98 48.0
AL1G52440 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 1.7e-12 76.6 131 44.3
AUR62027892 Chenopodium quinoa HOM05D005355 ORTHO05D006591 1.7e-12 76.6 70 50.0
Ciclev10000938m.g Citrus clementina HOM05D005355 ORTHO05D006591 1.7e-12 76.6 144 41.7
MD15G1351600 Malus domestica HOM05D005355 ORTHO05D006591 1.7e-12 76.6 117 44.4
PSO528G0270 Papaver somniferum HOM05D005355 ORTHO05D006591 2.3e-12 76.3 133 42.9
Phvul.009G124200 Phaseolus vulgaris HOM05D005355 ORTHO05D006591 2.3e-12 76.3 133 42.9
CDE06G1640 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 3.9e-12 75.5 149 39.6
Thecc.08G123400 Theobroma cacao HOM05D005355 ORTHO05D006591 3.9e-12 75.5 74 54.1
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 5.1e-12 75.1 98 46.9
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea HOM05D005355 ORTHO05D006591 6.6e-12 74.7 108 48.1
Potri.005G176400 Populus trichocarpa HOM05D005355 ORTHO05D006591 6.6e-12 74.7 129 44.2
Gohir.D06G044400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 1.1e-11 73.9 73 52.1
CiPaw.05G223300 Carya illinoinensis HOM05D005355 ORTHO05D006591 1.5e-11 73.6 85 47.1
Ca_15194_v3 Cicer arietinum L. HOM05D005355 ORTHO05D006591 1.5e-11 73.6 144 39.6
CANSAT25G1794 Cannabis sativa HOM05D005355 ORTHO05D006591 1.9e-11 73.2 132 42.4
Medtr3g072480 Medicago truncatula HOM05D005355 ORTHO05D006591 1.9e-11 73.2 131 40.5
Potri.002G085000 Populus trichocarpa HOM05D005355 ORTHO05D006591 1.9e-11 73.2 129 44.2
Duzib116G0422 Durio zibethinus HOM05D005355 ORTHO05D006591 2.5e-11 72.8 73 52.1
Thhalv10029139m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 5.6e-11 71.6 132 40.9
PSO170G1761 Papaver somniferum HOM05D005355 ORTHO05D006591 5.6e-11 71.6 133 42.9
TWI56G0611 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 5.6e-11 71.6 132 40.9
Aqoxy6G00187 Aquilegia oxysepala HOM05D005355 ORTHO05D006591 9.5e-11 70.9 126 42.9
Lsat_1_v5_gn_5_101461 Lactuca sativa HOM05D005355 ORTHO05D006591 9.5e-11 70.9 150 36.0
AT1G44780 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 1.2e-10 70.5 133 42.9
BcaB07g33934 Brassica carinata HOM05D005355 ORTHO05D006591 1.2e-10 70.5 126 41.3
Sp1g33640 Schrenkiella parvula HOM05D005355 ORTHO05D006591 1.2e-10 70.5 92 47.8
Gohir.A05G234400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 1.6e-10 70.1 151 38.4
ClCG08G005570 Citrullus lanatus HOM05D005355 ORTHO05D006591 2.1e-10 69.7 128 39.8
CsaV3_2G014020 Cucumis sativus L. HOM05D005355 ORTHO05D006591 2.1e-10 69.7 128 41.4
Thhalv10011453m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 2.1e-10 69.7 132 41.7
THA.LOC104817273 Tarenaya hassleriana HOM05D005355 ORTHO05D006591 2.1e-10 69.7 99 44.4
CDE06G1231 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 2.8e-10 69.3 159 39.0
PGR044G2411 Punica granatum HOM05D005355 ORTHO05D006591 3.6e-10 68.9 135 40.0
VMungo1309G2754 Vigna mungo HOM05D005355 ORTHO05D006591 3.6e-10 68.9 134 40.3
Os11g0544600 Oryza sativa ssp. japonica HOM05D005355 ORTHO05D006591 4.7e-10 68.6 129 40.3
ECA238G0419 Erigeron canadensis HOM05D005355 ORTHO05D006591 6.2e-10 68.2 127 39.4
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea HOM05D005355 ORTHO05D006591 8.1e-10 67.8 99 46.5
Aa31LG9G14260 Aethionema arabicum HOM05D005355 ORTHO05D006591 1.1e-09 67.4 80 43.8
Glyma.04G250500 Glycine max HOM05D005355 ORTHO05D006591 1.4e-09 67.0 133 38.3
Zm00001eb113700 Zea mays HOM05D005355 ORTHO05D006591 1.4e-09 67.0 138 42.0
Cfa016002 Carpinus fangiana HOM05D005355 ORTHO05D006591 2.4e-09 66.2 133 38.3
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 3.1e-09 65.9 122 38.5
C06p00770 Brassica napus HOM05D005355 ORTHO05D006591 3.1e-09 65.9 122 38.5
BolC6t35219H Brassica oleracea HOM05D005355 ORTHO05D006591 3.1e-09 65.9 122 38.5
AL6G42080 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 4.0e-09 65.5 95 42.1
arahy.Tifrunner.gnm1.ann1.V8LFJN Arachis hypogaea HOM05D005355 ORTHO05D006591 4.0e-09 65.5 127 39.4
Glyma.06G112300 Glycine max HOM05D005355 ORTHO05D006591 5.2e-09 65.1 132 38.6
Sed0010827 Sechium edule HOM05D005355 ORTHO05D006591 6.8e-09 64.7 135 38.5
DCAR_011614 Daucus carota HOM05D005355 ORTHO05D006591 8.9e-09 64.3 128 39.1
Sp6g09690 Schrenkiella parvula HOM05D005355 ORTHO05D006591 8.9e-09 64.3 97 40.2
TPR.G24014 Trifolium pratense HOM05D005355 ORTHO05D006591 2.6e-08 62.8 133 36.8
ATR0104G007 Amborella trichopoda HOM05D005355 ORTHO05D006591 3.4e-08 62.4 143 33.6
AT4G08310 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 3.4e-08 62.4 96 40.6
SHI29459 Sapria himalayana HOM05D005355 ORTHO05D006591 3.4e-08 62.4 129 37.2
Gorai.009G245100 Gossypium raimondii HOM05D005355 ORTHO05D006591 4.4e-08 62.0 148 35.1
Lalb_Chr08g0241491 Lupinus albus HOM05D005355 ORTHO05D006591 4.4e-08 62.0 84 41.7
Psat5g132440 Pisum sativum HOM05D005355 ORTHO05D006591 4.4e-08 62.0 144 35.4
A10p07350 Brassica napus HOM05D005355 ORTHO05D006591 7.6e-08 61.2 125 40.8
BraSC36t46079Z Brassica rapa HOM05D005355 ORTHO05D006591 7.6e-08 61.2 125 40.8
Gohir.D05G236700 Gossypium hirsutum HOM05D005355 ORTHO05D006591 7.6e-08 61.2 147 36.7
QL09p035410 Quercus lobata HOM05D005355 ORTHO05D006591 7.6e-08 61.2 142 37.3
CARHR036040 Cardamine hirsuta HOM05D005355 ORTHO05D006591 9.9e-08 60.8 61 50.8
TAR625G0673 Trochodendron aralioides HOM05D005355 ORTHO05D006591 1.3e-07 60.5 130 37.7
Carub.0006s2687 Capsella rubella HOM05D005355 ORTHO05D006591 1.7e-07 60.1 99 39.4
CARHR259390 Cardamine hirsuta HOM05D005355 ORTHO05D006591 2.2e-07 59.7 74 41.9
CiPaw.06G029200 Carya illinoinensis HOM05D005355 ORTHO05D006591 2.9e-07 59.3 128 37.5
Gorai.010G049600 Gossypium raimondii HOM05D005355 ORTHO05D006591 2.9e-07 59.3 148 34.5
HanXRQChr04g0109451 Helianthus annuus HOM05D005355 ORTHO05D006591 2.9e-07 59.3 139 36.7
MELO3C010600.2 Cucumis melo HOM05D005355 ORTHO05D006591 4.9e-07 58.5 128 37.5
Lj1g0013612 Lotus japonicus HOM05D005355 ORTHO05D006591 4.9e-07 58.5 134 36.6
Pp3c21_16190 Physcomitrium patens HOM05D005355 ORTHO05D006591 6.4e-07 58.2 62 48.4
vmacro00824 Vaccinium macrocarpon HOM05D005355 ORTHO05D006591 6.4e-07 58.2 112 38.4
MD00G1157400 Malus domestica HOM05D005355 ORTHO05D006591 8.4e-07 57.8 118 35.6
Sabra02G0066400 Salix brachista HOM05D005355 ORTHO05D006591 8.4e-07 57.8 152 37.5
Gohir.A06G043600 Gossypium hirsutum HOM05D005355 ORTHO05D006591 1.4e-06 57.0 150 34.0
SEGI_25872 Sequoiadendron giganteum HOM05D005355 ORTHO05D006591 1.9e-06 56.6 62 43.5
Atru.chr13.1433 Acer truncatum HOM05D005355 ORTHO05D006591 2.4e-06 56.2 106 46.2
FAN20G1264 Fragaria x ananassa HOM05D005355 ORTHO05D006591 2.4e-06 56.2 143 32.2
Peaxi162Scf00914g00033 Petunia axillaris HOM05D005355 ORTHO05D006591 3.2e-06 55.8 112 42.9
RhsimUnG0093800 Rhododendron simsii HOM05D005355 ORTHO05D006591 4.2e-06 55.5 143 33.6
Mapoly0004s0202 Marchantia polymorpha HOM05D005355 ORTHO05D006591 7.1e-06 54.7 154 33.8


User provided reference genes

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