Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold340G49291 Striga asiatica HOM05D007619 ORTHO05D009522 4.4e-161 571.2 287 100.0
Migut.F01883 Erythranthe guttata HOM05D007619 ORTHO05D009522 2.9e-72 276.2 281 57.7
MSTRG.27407 Avicennia marina HOM05D007619 ORTHO05D009522 1.8e-69 266.9 314 50.3
PGSC0003DMG400023471 Solanum tuberosum HOM05D007619 ORTHO05D009522 5.1e-61 238.8 303 48.2
Cc09_g03420 Coffea canephora HOM05D007619 ORTHO05D009522 6.7e-61 238.4 320 46.2
Atru.chr12.2107 Acer truncatum HOM05D007619 ORTHO05D009522 2.5e-60 236.5 277 50.5
Peaxi162Scf00156g00417 Petunia axillaris HOM05D007619 ORTHO05D009522 3.3e-60 236.1 303 48.8
Solyc05g055830.3 Solanum lycopersicum HOM05D007619 ORTHO05D009522 3.3e-60 236.1 303 47.5
Oeu010149.1 Olea europaea HOM05D007619 ORTHO05D009522 4.3e-60 235.7 273 51.6
Sopen05g034230 Solanum pennellii HOM05D007619 ORTHO05D009522 4.3e-60 235.7 303 47.2
TAR633G2353 Trochodendron aralioides HOM05D007619 ORTHO05D009522 6.3e-59 231.9 315 44.8
PSO017G6303 Papaver somniferum HOM05D007619 ORTHO05D009522 8.2e-59 231.5 305 46.2
Eucgr.C02023 Eucalyptus grandis HOM05D007619 ORTHO05D009522 1.4e-58 230.7 309 46.0
GSVIVG01019143001 Vitis vinifera HOM05D007619 ORTHO05D009522 1.8e-58 230.3 304 47.7
Ca_09970_v3 Cicer arietinum L. HOM05D007619 ORTHO05D009522 6.9e-58 228.4 313 46.0
CAN.G694.14 Capsicum annuum HOM05D007619 ORTHO05D009522 1.2e-57 227.6 291 48.5
Manes.09G184300 Manihot esculenta HOM05D007619 ORTHO05D009522 2.6e-57 226.5 322 44.4
ClCG11G010990 Citrullus lanatus HOM05D007619 ORTHO05D009522 7.7e-57 224.9 286 47.2
Gohir.1Z049672 Gossypium hirsutum HOM05D007619 ORTHO05D009522 1.3e-56 224.2 306 45.4
Gohir.D08G244101 Gossypium hirsutum HOM05D007619 ORTHO05D009522 1.3e-56 224.2 306 45.4
Medtr1g078380 Medicago truncatula HOM05D007619 ORTHO05D009522 2.2e-56 223.4 310 45.5
Psat4g220960 Pisum sativum HOM05D007619 ORTHO05D009522 2.9e-56 223.0 295 47.5
Thecc.05G206200 Theobroma cacao HOM05D007619 ORTHO05D009522 2.9e-56 223.0 303 45.9
Ciclev10012185m.g Citrus clementina HOM05D007619 ORTHO05D009522 6.5e-56 221.9 323 44.9
Hma1.2p1_0220F.1_g093010 Hydrangea macrophylla HOM05D007619 ORTHO05D009522 6.5e-56 221.9 272 49.3
TPR.G14653 Trifolium pratense HOM05D007619 ORTHO05D009522 6.5e-56 221.9 316 44.0
Nn7g37654 Nelumbo nucifera HOM05D007619 ORTHO05D009522 1.1e-55 221.1 323 44.0
Gorai.004G260400 Gossypium raimondii HOM05D007619 ORTHO05D009522 1.4e-55 220.7 306 45.1
Lalb_Chr02g0149381 Lupinus albus HOM05D007619 ORTHO05D009522 1.4e-55 220.7 301 46.2
MD04G1241800 Malus domestica HOM05D007619 ORTHO05D009522 2.5e-55 219.9 324 44.4
Lalb_Chr21g0311391 Lupinus albus HOM05D007619 ORTHO05D009522 4.2e-55 219.2 290 45.5
Glyma.10G170300 Glycine max HOM05D007619 ORTHO05D009522 5.5e-55 218.8 310 43.2
RcHm_v2.0_Chr3g0448201 Rosa chinensis HOM05D007619 ORTHO05D009522 9.4e-55 218.0 309 45.6
HanXRQChr07g0190091 Helianthus annuus HOM05D007619 ORTHO05D009522 1.2e-54 217.6 276 46.0
Glyma.20G219700 Glycine max HOM05D007619 ORTHO05D009522 1.6e-54 217.2 325 42.8
Lsat_1_v5_gn_2_17180 Lactuca sativa HOM05D007619 ORTHO05D009522 4.7e-54 215.7 268 47.8
EL10Ac4g09950 Beta vulgaris HOM05D007619 ORTHO05D009522 6.1e-54 215.3 291 44.3
Phvul.010G077712 Phaseolus vulgaris HOM05D007619 ORTHO05D009522 6.1e-54 215.3 311 44.1
TPR.G14659 Trifolium pratense HOM05D007619 ORTHO05D009522 1.0e-53 214.5 315 45.7
SalBow6G3661 Salvia bowleyana HOM05D007619 ORTHO05D009522 3.0e-53 213.0 290 47.9
Aqoxy2G03954 Aquilegia oxysepala HOM05D007619 ORTHO05D009522 3.9e-53 212.6 320 45.0
MELO3C008758.2 Cucumis melo HOM05D007619 ORTHO05D009522 5.1e-53 212.2 297 46.1
Cfa006282 Carpinus fangiana HOM05D007619 ORTHO05D009522 1.5e-52 210.7 305 43.6
Haze_04528 Corylus avellana HOM05D007619 ORTHO05D009522 5.7e-52 208.8 305 43.9
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 7.4e-52 208.4 298 44.0
Hund27507 Selenicereus undatus HOM05D007619 ORTHO05D009522 9.7e-52 208.0 319 42.3
vmacro10399 Vaccinium macrocarpon HOM05D007619 ORTHO05D009522 9.7e-52 208.0 312 43.3
arahy.Tifrunner.gnm1.ann1.YK6SIT Arachis hypogaea HOM05D007619 ORTHO05D009522 2.8e-51 206.5 303 44.6
ECA238G3388 Erigeron canadensis HOM05D000092 ORTHO05D000042 4.8e-51 205.7 272 46.3
arahy.Tifrunner.gnm1.ann1.P2W93U Arachis hypogaea HOM05D007619 ORTHO05D009522 6.3e-51 205.3 305 44.3
Sc09g0001560 Simmondsia chinensis HOM05D007619 ORTHO05D009522 2.6e-49 199.9 306 42.8
Ah.06g195590 Amaranthus hybridus HOM05D000031 ORTHO05D000030 4.5e-49 199.1 294 41.8
Potri.013G087300 Populus trichocarpa HOM05D007619 ORTHO05D009522 4.5e-49 199.1 313 42.8
CsaV3_2G009500 Cucumis sativus L. HOM05D007619 ORTHO05D009522 5.0e-48 195.7 297 42.4
Gohir.A08G223800 Gossypium hirsutum HOM05D007619 ORTHO05D009522 6.5e-48 195.3 270 44.1
CDE04G2379 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 8.5e-48 194.9 307 41.7
MBI11_g04278_MAGBIO Magnolia biondii HOM05D007619 ORTHO05D009522 1.1e-47 194.5 311 42.1
Hund21888 Selenicereus undatus HOM05D007619 ORTHO05D009522 1.4e-47 194.1 238 46.6
VMungo0720G2770 Vigna mungo HOM05D007619 ORTHO05D009522 3.2e-47 193.0 325 38.5
AUR62000347 Chenopodium quinoa HOM05D000031 ORTHO05D009522 2.7e-46 189.9 298 39.6
FAN09G3963 Fragaria x ananassa HOM05D007619 ORTHO05D009522 1.8e-45 187.2 372 39.0
FAN14G0392 Fragaria x ananassa HOM05D007619 ORTHO05D009522 5.7e-44 182.2 351 39.0
FAN05G3312 Fragaria x ananassa HOM05D007619 ORTHO05D009522 7.4e-44 181.8 383 36.6
CDE07G1839 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 1.3e-43 181.0 186 53.2
Zm00001eb394570 Zea mays HOM05D007619 ORTHO05D009522 3.5e-41 172.9 313 37.7
Zm00001eb017060 Zea mays HOM05D007619 ORTHO05D009522 7.7e-41 171.8 320 39.1
Mapoly0093s0084 Marchantia polymorpha HOM05D007619 ORTHO05D009522 1.7e-40 170.6 275 42.2
Nitab4.5_0009285g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 4.2e-39 166.0 310 39.7
Nitab4.5_0005183g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 1.2e-38 164.5 302 38.4
Sed0001247 Sechium edule HOM05D007619 ORTHO05D009522 8.0e-38 161.8 257 40.5
Duzib128G0301 Durio zibethinus HOM05D007619 ORTHO05D009522 2.3e-37 160.2 269 39.4
PSO675G7165 Papaver somniferum HOM05D007619 ORTHO05D009522 3.0e-37 159.8 267 42.3
Actinidia34778 Actinidia chinensis HOM05D007619 ORTHO05D009522 5.2e-37 159.1 179 50.3
Lj5g0000048 Lotus japonicus HOM05D007619 ORTHO05D009522 5.2e-37 159.1 262 42.0
Os01g0100600 Oryza sativa ssp. japonica HOM05D007619 ORTHO05D009522 8.8e-37 158.3 322 37.9
FAN02G4130 Fragaria x ananassa HOM05D007619 ORTHO05D009522 2.6e-36 156.8 309 37.5
HPP92_024640 Vanilla planifolia HOM05D001334 ORTHO05D001119 5.7e-36 155.6 245 41.2
CiPaw.08G116400 Carya illinoinensis HOM05D007619 ORTHO05D009522 1.7e-35 154.1 262 39.7
Prupe.6G359200 Prunus persica HOM05D007619 ORTHO05D009522 2.2e-35 153.7 253 41.9
Rhsim09G0130800 Rhododendron simsii HOM05D003215 ORTHO05D003735 9.1e-34 148.3 367 34.6
AUR62006691 Chenopodium quinoa HOM05D007619 ORTHO05D009522 1.3e-32 144.4 302 36.1
Pp3c8_1020 Physcomitrium patens HOM05D007619 ORTHO05D009522 3.8e-32 142.9 208 46.2
AagrBONN_evm.TU.Sc2ySwM_117.3969 Anthoceros agrestis HOM05D007619 ORTHO05D009522 3.2e-31 139.8 287 39.4
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-29 134.8 84 76.2
Sabra18G0055400 Salix brachista HOM05D007619 ORTHO05D009522 1.5e-28 131.0 93 67.7
Oeu040489.1 Olea europaea HOM05D007619 ORTHO05D009522 2.6e-28 130.2 97 63.9
Dinv29118 Davidia involucrata HOM05D007619 ORTHO05D009522 4.4e-28 129.4 232 39.2
SEGI_00786 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 1.3e-27 127.9 107 57.9
MD12G1258700 Malus domestica HOM05D007619 ORTHO05D009522 5.7e-20 102.4 61 75.4
SMO230G0088 Selaginella moellendorffii HOM05D007619 ORTHO05D009522 1.7e-19 100.9 193 36.3
SHI13735 Sapria himalayana HOM05D007619 ORTHO05D009522 2.7e-17 93.6 271 30.3
MD12G1258600 Malus domestica HOM05D007619 ORTHO05D009522 1.5e-15 87.8 182 35.2
Actinidia38907 Actinidia chinensis HOM05D003215 ORTHO05D003735 1.6e-14 84.3 131 43.5
Cpa.g.c37388 Carica papaya HOM05D007619 ORTHO05D009522 4.7e-14 82.8 50 74.0
Cpa.g.sc1371.1 Carica papaya HOM05D007619 ORTHO05D009522 1.2e-09 68.2 179 31.8
ATR0609G094 Amborella trichopoda HOM05D007619 ORTHO05D009522 1.7e-08 64.3 172 34.9
FvH4_6g00730 Fragaria vesca HOM05D007619 ORTHO05D009522 8.6e-08 62.0 41 75.6
Sabra18G0055300 Salix brachista HOM05D007619 ORTHO05D009522 1.1e-07 61.6 200 31.5
Oeu040487.1 Olea europaea HOM05D007619 ORTHO05D009522 1.6e-06 57.8 125 36.8


User provided reference genes

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