Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 1.2e-272 942.6 467 100.0
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 5.6e-182 641.3 438 72.1
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 5.8e-171 604.7 440 69.3
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 1.1e-166 590.5 449 66.8
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 1.1e-166 590.5 449 66.8
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 7.6e-155 551.2 461 62.7
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 4.3e-150 535.4 435 62.3
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 8.1e-149 531.2 445 61.8
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 6.9e-148 528.1 436 61.2
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 1.7e-146 523.5 434 59.4
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 8.4e-146 521.2 440 60.9
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 3.2e-145 519.2 441 59.4
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 3.5e-144 515.8 444 59.7
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 3.4e-139 499.2 436 60.1
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 5.8e-139 498.4 420 62.1
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 1.0e-138 497.7 432 58.8
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 2.2e-138 496.5 436 59.4
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 2.9e-138 496.1 426 60.8
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 3.8e-138 495.7 433 58.9
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 8.4e-138 494.6 435 58.2
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 8.4e-138 494.6 438 58.7
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 1.1e-137 494.2 433 58.4
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 3.2e-137 492.7 433 55.4
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.6e-136 490.3 433 58.0
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 1.6e-136 490.3 438 59.4
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 4.6e-136 488.8 436 58.3
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 5.1e-135 485.3 432 57.6
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 6.7e-135 485.0 434 56.9
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 4.1e-132 475.7 438 55.9
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 4.1e-132 475.7 438 58.4
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 5.3e-132 475.3 442 55.9
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 2.0e-131 473.4 440 55.5
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 4.5e-131 472.2 437 55.6
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 1.3e-130 470.7 432 57.2
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 3.8e-130 469.2 542 49.1
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 5.0e-130 468.8 436 56.7
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 1.9e-129 466.8 440 55.2
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 1.6e-128 463.8 430 55.8
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 3.6e-128 462.6 434 54.8
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 7.9e-128 461.5 444 53.8
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 7.9e-128 461.5 440 55.0
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 7.9e-128 461.5 427 58.1
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.3e-127 459.9 391 61.1
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 8.8e-127 458.0 436 55.3
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 1.7e-125 453.8 443 54.2
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 3.7e-125 452.6 495 51.7
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 8.2e-125 451.4 428 53.0
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 1.4e-124 450.7 444 52.5
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 1.2e-123 447.6 428 54.2
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 1.5e-123 447.2 435 52.9
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 2.6e-123 446.4 434 51.4
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 4.5e-123 445.7 438 52.1
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 4.5e-123 445.7 440 52.7
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 7.7e-123 444.9 430 53.0
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 1.7e-122 443.7 431 53.6
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 5.0e-122 442.2 428 52.1
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 5.0e-122 442.2 474 49.4
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 6.5e-122 441.8 449 50.8
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 6.5e-122 441.8 439 52.6
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 1.1e-121 441.0 434 51.8
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 1.1e-121 441.0 456 53.1
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 4.2e-121 439.1 429 52.0
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 5.5e-121 438.7 431 52.7
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 7.2e-121 438.3 430 52.6
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 2.7e-120 436.4 432 52.5
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 2.7e-120 436.4 437 51.9
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 3.6e-120 436.0 435 54.9
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 1.0e-119 434.5 437 52.6
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 3.9e-119 432.6 433 52.2
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 4.4e-118 429.1 449 49.4
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 7.4e-118 428.3 401 57.4
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 6.3e-117 425.2 429 52.0
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 8.2e-117 424.9 443 51.5
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 5.3e-116 422.2 430 51.4
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 3.2e-113 412.9 387 56.6
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 6.1e-112 408.7 441 48.3
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 1.8e-111 407.1 439 49.0
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 8.8e-111 404.8 337 59.3
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.3e-109 401.0 433 49.7
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 3.8e-106 389.4 383 53.3
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 2.5e-105 386.7 467 47.1
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 4.7e-104 382.5 442 47.7
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 2.6e-102 376.7 449 45.7
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 5.7e-102 375.6 399 50.6
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 1.8e-100 370.5 466 45.5
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 1.9e-97 360.5 346 54.0
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 2.7e-96 356.7 364 53.3
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 1.8e-95 354.0 431 44.3
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 7.5e-94 348.6 390 49.2
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 1.2e-88 331.3 456 42.3
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 2.0e-86 323.9 367 51.8
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 4.1e-84 316.2 418 42.1
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.3e-82 311.2 344 52.9
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 3.3e-81 306.6 442 40.7
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 1.0e-74 285.0 299 47.2
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.8e-71 274.2 382 41.6
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 2.6e-70 270.4 370 42.4
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 3.5e-59 233.4 305 43.6
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 3.4e-54 216.9 190 52.1
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 1.9e-52 211.1 168 61.3
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 2.5e-49 200.7 405 31.6
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 1.3e-48 198.4 243 51.0
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 1.7e-42 177.9 247 40.9
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 6.6e-42 176.0 237 45.1
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 3.1e-31 140.6 184 52.2
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 7.1e-28 129.4 162 45.7
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 1.6e-19 101.7 173 39.3
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 1.3e-18 98.6 99 50.5
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 3.1e-15 87.4 62 61.3
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 2.5e-12 77.8 96 55.2
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 4.6e-11 73.6 53 66.0
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.1e-09 68.9 193 28.0
BolC8t49566H Brassica oleracea HOM05D040593 ORTHO05D033422 7.7e-06 56.2 34 67.6


User provided reference genes

Program Settings