Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 8.0e-197 690.3 355 100.0
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 1.2e-163 580.1 356 82.9
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 4.3e-158 561.6 359 80.8
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 1.6e-157 559.7 359 78.8
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 2.8e-157 558.9 359 78.3
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 6.2e-157 557.8 359 78.0
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 6.8e-156 554.3 359 76.9
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 7.5e-155 550.8 364 78.3
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 1.4e-153 546.6 359 78.0
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 1.9e-153 546.2 374 74.9
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 4.1e-153 545.0 358 78.5
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 7.1e-153 544.3 359 75.8
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 7.1e-153 544.3 359 75.8
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 9.2e-153 543.9 359 77.2
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 1.2e-152 543.5 345 81.4
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 2.7e-152 542.3 358 77.1
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 4.6e-152 541.6 359 75.8
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 4.6e-152 541.6 358 77.4
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 7.8e-152 540.8 357 75.6
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 2.3e-151 539.3 358 77.1
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 2.3e-151 539.3 358 77.1
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 8.6e-151 537.3 358 77.4
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 1.1e-150 537.0 359 75.2
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 1.9e-150 536.2 359 78.0
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 3.6e-149 531.9 356 76.4
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 5.2e-148 528.1 360 75.3
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 5.2e-148 528.1 361 75.3
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 1.5e-147 526.6 359 75.2
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 6.4e-146 521.2 361 71.5
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 8.4e-146 520.8 359 73.8
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 1.9e-145 519.6 323 78.6
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 2.4e-145 519.2 359 74.7
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 9.2e-145 517.3 361 71.2
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 2.7e-144 515.8 359 71.6
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 3.5e-144 515.4 361 72.3
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 4.6e-144 515.0 359 72.4
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 6.0e-144 514.6 324 79.3
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 7.8e-144 514.2 359 70.8
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 1.0e-143 513.8 359 71.6
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 1.0e-143 513.8 359 74.1
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 3.9e-143 511.9 359 73.5
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 1.9e-142 509.6 410 64.6
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 5.6e-142 508.1 359 70.8
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 2.8e-141 505.8 379 70.2
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 3.6e-141 505.4 370 70.5
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 3.1e-140 502.3 360 71.7
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 5.3e-140 501.5 357 70.0
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 2.0e-139 499.6 346 74.0
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 5.8e-139 498.0 359 71.0
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 5.8e-139 498.0 359 71.0
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 7.6e-139 497.7 346 73.7
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 1.3e-138 496.9 346 74.0
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 2.2e-138 496.1 358 70.9
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 1.1e-137 493.8 345 73.6
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 1.4e-137 493.4 358 70.7
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 3.2e-137 492.3 353 69.4
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 1.2e-136 490.3 359 70.2
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 3.5e-136 488.8 359 69.9
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 4.6e-136 488.4 346 71.7
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 7.8e-136 487.6 359 70.2
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 7.8e-136 487.6 358 69.8
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 7.3e-134 481.1 405 65.4
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.3e-133 480.3 362 67.4
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 1.2e-131 473.8 342 71.9
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 1.3e-130 470.3 335 69.6
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 2.4e-129 466.1 287 82.6
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 2.3e-127 459.5 361 65.4
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 1.5e-126 456.8 337 68.5
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 2.4e-124 449.5 340 65.3
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 6.9e-124 448.0 319 72.7
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 1.5e-123 446.8 343 69.1
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 2.0e-123 446.4 319 71.8
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 2.5e-121 439.5 358 67.0
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 3.5e-120 435.6 358 62.0
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 4.8e-117 425.2 346 60.4
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 1.5e-115 420.2 381 62.2
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 1.6e-112 410.2 344 61.6
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 3.1e-108 396.0 306 65.7
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 2.6e-107 392.9 413 54.7
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 2.9e-106 389.4 279 73.1
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 5.1e-103 378.6 399 54.9
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 1.3e-101 374.0 359 57.4
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.7e-101 373.6 381 57.2
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 8.2e-101 371.3 377 54.6
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 1.4e-95 354.0 367 55.9
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 1.7e-93 347.1 260 68.8
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 1.1e-92 344.4 384 54.2
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 2.3e-87 326.6 294 65.0
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 5.2e-87 325.5 340 49.4
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 1.4e-79 300.8 319 47.0
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 2.0e-75 287.0 246 60.6
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 7.7e-75 285.0 166 84.3
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 1.0e-74 284.6 170 82.9
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 7.2e-73 278.5 190 77.9
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 9.4e-73 278.1 166 77.7
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 2.3e-66 256.9 172 78.5
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.1e-65 254.6 169 72.2
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 1.5e-65 254.2 175 76.0
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 1.5e-65 254.2 176 77.8
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.2e-64 251.1 175 74.3
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.5e-62 244.2 240 56.2
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 3.9e-58 229.6 183 62.8
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 6.6e-58 228.8 155 73.5
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 2.3e-55 220.3 307 40.7
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 1.2e-54 218.0 174 66.7
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 9.2e-52 208.4 123 78.9
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 2.1e-48 197.2 108 86.1
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 1.4e-44 184.5 209 55.0
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 3.2e-44 183.3 112 76.8
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 4.1e-44 183.0 131 70.2
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 2.1e-43 180.6 112 73.2
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 1.6e-40 171.0 140 63.6
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 4.4e-38 162.9 126 62.7
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 3.7e-37 159.8 362 31.8
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 1.4e-36 157.9 90 84.4
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 3.2e-36 156.8 94 76.6
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 2.1e-35 154.1 101 70.3
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 1.1e-33 148.3 148 55.4
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 3.1e-31 140.2 102 65.7
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 2.6e-30 137.1 104 66.3
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 8.4e-29 132.1 75 78.7
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 8.1e-24 115.5 123 43.9
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 6.9e-23 112.5 82 69.5
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 1.5e-22 111.3 219 33.8
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 7.6e-22 109.0 67 76.1
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 9.9e-22 108.6 79 72.2
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 6.4e-21 105.9 75 69.3
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 2.1e-16 90.9 108 50.0
MBI14_g15702_MAGBIO Magnolia biondii HOM05D006555 ORTHO05D008376 1.7e-13 81.3 310 27.4
TWI56G0535 Tripterygium wilfordii HOM05D006555 ORTHO05D008376 2.4e-12 77.4 336 26.8
EL10Ac3g05120 Beta vulgaris HOM05D006555 ORTHO05D008376 4.2e-12 76.6 341 24.9
Manes.17G119457 Manihot esculenta HOM05D006555 ORTHO05D008376 1.6e-11 74.7 341 26.7
HanXRQChr15g0474321 Helianthus annuus HOM05D006555 ORTHO05D008376 1.8e-10 71.2 344 25.3
arahy.Tifrunner.gnm1.ann1.LDE0EK Arachis hypogaea HOM05D006555 ORTHO05D008376 2.3e-10 70.9 267 24.0
Duzib187G0608 Durio zibethinus HOM05D006555 ORTHO05D008376 5.1e-10 69.7 314 24.5
Sc20g0004830 Simmondsia chinensis HOM05D006555 ORTHO05D008376 1.9e-09 67.8 315 25.7
AUR62005932 Chenopodium quinoa HOM05D006555 ORTHO05D008376 7.4e-09 65.9 236 25.8
AUR62005935 Chenopodium quinoa HOM05D006555 ORTHO05D008376 7.4e-09 65.9 236 25.8
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 7.4e-09 65.9 328 24.1
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 2.8e-08 63.9 152 30.3
Sabra05G0090500 Salix brachista HOM05D006555 ORTHO05D008376 2.4e-07 60.8 242 26.9
BcaC04g24063 Brassica carinata HOM05D006225 ORTHO05D007676 1.5e-06 58.2 43 60.5
Glyma.08G102000 Glycine max HOM05D006555 ORTHO05D008376 3.4e-06 57.0 321 26.5
VMungo0251G3141 Vigna mungo HOM05D006555 ORTHO05D008376 1.0e-05 55.5 327 25.4


User provided reference genes

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