Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 4.5e-149 531.2 259 100.0
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 1.6e-16 90.9 45 88.9
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 2.0e-16 90.5 45 84.4
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 2.0e-16 90.5 47 80.9
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 4.5e-16 89.4 45 84.4
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 4.5e-16 89.4 47 78.7
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 4.5e-16 89.4 45 86.7
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 5.9e-16 89.0 45 86.7
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 5.9e-16 89.0 45 86.7
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 5.9e-16 89.0 45 84.4
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 7.7e-16 88.6 45 82.2
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 7.7e-16 88.6 45 82.2
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 7.7e-16 88.6 45 82.2
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 7.7e-16 88.6 45 86.7
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 7.7e-16 88.6 45 84.4
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 7.7e-16 88.6 45 84.4
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.0e-15 88.2 45 82.2
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.0e-15 88.2 45 82.2
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 1.3e-15 87.8 45 84.4
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 1.3e-15 87.8 45 84.4
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 1.3e-15 87.8 45 84.4
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 1.7e-15 87.4 45 84.4
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 1.7e-15 87.4 45 82.2
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 2.3e-15 87.0 45 82.2
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 2.9e-15 86.7 45 80.0
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.8e-15 86.3 45 77.8
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.8e-15 86.3 45 77.8
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 3.8e-15 86.3 45 77.8
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 3.8e-15 86.3 46 80.4
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 6.6e-15 85.5 45 77.8
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 8.6e-15 85.1 45 82.2
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 8.6e-15 85.1 45 77.8
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 8.6e-15 85.1 45 80.0
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 8.6e-15 85.1 45 82.2
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 1.1e-14 84.7 45 77.8
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 1.1e-14 84.7 45 77.8
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.5e-14 84.3 45 80.0
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 1.9e-14 84.0 45 77.8
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 2.5e-14 83.6 45 80.0
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 2.5e-14 83.6 45 80.0
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 2.5e-14 83.6 45 80.0
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 3.3e-14 83.2 44 81.8
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 3.3e-14 83.2 45 80.0
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 4.2e-14 82.8 45 77.8
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 4.2e-14 82.8 45 75.6
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 5.5e-14 82.4 45 80.0
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 5.5e-14 82.4 45 77.8
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 5.5e-14 82.4 45 75.6
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 5.5e-14 82.4 45 80.0
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 7.2e-14 82.0 45 75.6
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 7.2e-14 82.0 45 77.8
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 7.2e-14 82.0 45 75.6
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 7.2e-14 82.0 45 77.8
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 7.2e-14 82.0 45 77.8
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 9.5e-14 81.6 45 73.3
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 9.5e-14 81.6 45 80.0
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 9.5e-14 81.6 45 77.8
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 1.2e-13 81.3 45 77.8
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 1.2e-13 81.3 45 75.6
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 1.2e-13 81.3 45 75.6
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 1.2e-13 81.3 45 77.8
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.2e-13 81.3 45 75.6
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 1.2e-13 81.3 45 77.8
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 1.6e-13 80.9 47 76.6
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 1.6e-13 80.9 45 75.6
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 1.6e-13 80.9 45 71.1
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 1.6e-13 80.9 45 73.3
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 1.6e-13 80.9 45 73.3
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 2.1e-13 80.5 45 73.3
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 2.8e-13 80.1 45 75.6
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 2.8e-13 80.1 45 77.8
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 2.8e-13 80.1 45 77.8
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 2.8e-13 80.1 45 75.6
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 3.6e-13 79.7 45 71.1
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 3.6e-13 79.7 63 60.3
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 4.7e-13 79.3 45 75.6
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 4.7e-13 79.3 45 75.6
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 4.7e-13 79.3 45 75.6
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 4.7e-13 79.3 45 75.6
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 4.7e-13 79.3 45 75.6
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 4.7e-13 79.3 45 75.6
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 4.7e-13 79.3 45 73.3
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 4.7e-13 79.3 45 75.6
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 4.7e-13 79.3 45 73.3
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 6.1e-13 79.0 45 75.6
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 6.1e-13 79.0 45 75.6
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 8.0e-13 78.6 45 71.1
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 8.0e-13 78.6 45 71.1
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 8.0e-13 78.6 45 71.1
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 8.0e-13 78.6 45 71.1
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 8.0e-13 78.6 45 71.1
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 8.0e-13 78.6 45 73.3
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 8.0e-13 78.6 45 71.1
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 1.0e-12 78.2 45 73.3
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 1.0e-12 78.2 45 73.3
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 1.4e-12 77.8 48 66.7
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 1.8e-12 77.4 45 73.3
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 3.0e-12 76.6 45 71.1
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 3.0e-12 76.6 44 72.7
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 4.0e-12 76.3 45 71.1
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 4.0e-12 76.3 45 71.1
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 5.2e-12 75.9 45 71.1
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 1.5e-11 74.3 43 74.4
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 5.7e-11 72.4 45 64.4
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 4.1e-09 66.2 45 62.2
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 4.1e-09 66.2 44 65.9
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 9.2e-09 65.1 45 60.0
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 2.0e-08 63.9 45 55.6


User provided reference genes

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