Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 1.6e-60 235.7 108 100.0
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 2.8e-52 208.4 108 91.7
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 2.4e-51 205.3 108 90.7
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 9.0e-43 176.8 105 77.1
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 7.6e-42 173.7 105 75.2
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 2.9e-41 171.8 105 76.2
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 4.9e-41 171.0 105 73.3
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 1.9e-40 169.1 97 77.3
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 2.5e-40 168.7 99 75.8
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 2.5e-40 168.7 97 77.3
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 4.2e-40 167.9 97 76.3
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 5.5e-40 167.5 121 65.3
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 5.5e-40 167.5 99 75.8
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.5e-40 167.5 101 74.3
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.5e-40 167.5 101 74.3
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 7.1e-40 167.2 99 74.7
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 7.1e-40 167.2 97 75.3
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 7.1e-40 167.2 97 75.3
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 9.3e-40 166.8 97 75.3
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 9.3e-40 166.8 98 75.5
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 1.2e-39 166.4 103 70.9
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.2e-39 166.4 103 70.9
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 1.2e-39 166.4 96 78.1
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 1.2e-39 166.4 96 78.1
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 1.2e-39 166.4 96 78.1
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 1.6e-39 166.0 97 75.3
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 1.6e-39 166.0 102 72.5
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 2.1e-39 165.6 106 69.8
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 4.6e-39 164.5 97 73.2
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 6.0e-39 164.1 107 72.0
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 6.0e-39 164.1 103 69.9
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 7.9e-39 163.7 97 75.3
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.0e-38 163.3 101 72.3
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.3e-38 162.9 106 71.7
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.3e-38 162.9 106 71.7
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 2.3e-38 162.2 107 67.3
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.3e-38 162.2 103 68.0
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.3e-38 162.2 97 74.2
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 3.0e-38 161.8 95 76.8
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 3.0e-38 161.8 95 75.8
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 3.0e-38 161.8 96 76.0
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 3.9e-38 161.4 98 74.5
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 3.9e-38 161.4 96 76.0
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 3.9e-38 161.4 96 75.0
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 3.9e-38 161.4 96 75.0
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 3.9e-38 161.4 96 74.0
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 5.1e-38 161.0 99 69.7
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 5.1e-38 161.0 96 74.0
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 6.7e-38 160.6 95 75.8
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 6.7e-38 160.6 95 75.8
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 6.7e-38 160.6 99 69.7
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 8.7e-38 160.2 99 69.7
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 1.5e-37 159.5 102 70.6
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 1.9e-37 159.1 98 71.4
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 2.5e-37 158.7 106 69.8
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 2.5e-37 158.7 106 69.8
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 2.5e-37 158.7 95 73.7
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 2.5e-37 158.7 101 70.3
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 3.3e-37 158.3 95 75.8
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 4.3e-37 157.9 97 72.2
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 5.7e-37 157.5 98 72.4
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 5.7e-37 157.5 103 67.0
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 7.4e-37 157.1 96 72.9
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 7.4e-37 157.1 97 72.2
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 7.4e-37 157.1 95 73.7
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 9.7e-37 156.8 103 67.0
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 9.7e-37 156.8 95 72.6
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 9.7e-37 156.8 98 71.4
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 9.7e-37 156.8 95 72.6
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.3e-36 156.4 94 72.3
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.3e-36 156.4 94 72.3
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 1.3e-36 156.4 97 72.2
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 1.3e-36 156.4 97 69.1
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 1.6e-36 156.0 93 77.4
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.8e-36 155.2 99 69.7
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 2.8e-36 155.2 97 71.1
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 2.8e-36 155.2 98 69.4
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 3.7e-36 154.8 99 67.7
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 4.8e-36 154.5 93 77.4
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 4.8e-36 154.5 95 71.6
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 4.8e-36 154.5 98 70.4
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 4.8e-36 154.5 97 71.1
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 6.3e-36 154.1 98 71.4
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 8.2e-36 153.7 117 61.5
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 4.1e-35 151.4 95 71.6
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 9.0e-35 150.2 96 70.8
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 1.2e-34 149.8 99 66.7
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.2e-34 149.8 95 72.6
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 2.0e-34 149.1 95 67.4
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 2.6e-34 148.7 96 69.8
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 2.6e-34 148.7 93 72.0
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 3.4e-34 148.3 96 67.7
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 7.6e-34 147.1 96 67.7
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 7.6e-34 147.1 107 64.5
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 1.3e-33 146.4 96 69.8
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 2.9e-33 145.2 94 67.0
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.9e-33 145.2 83 75.9
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 3.8e-33 144.8 96 70.8
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 3.8e-33 144.8 96 66.7
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 3.8e-33 144.8 96 66.7
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 8.5e-33 143.7 93 67.7
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 8.5e-33 143.7 93 67.7
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 1.1e-32 143.3 93 68.8
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 1.1e-32 143.3 108 57.4
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 1.4e-32 142.9 97 67.0
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 4.2e-32 141.4 82 79.3
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 7.2e-32 140.6 104 62.5
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 1.6e-31 139.4 95 63.2
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 2.7e-31 138.7 91 68.1
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 6.1e-31 137.5 95 65.3
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 6.1e-31 137.5 95 65.3
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 7.9e-31 137.1 95 65.3
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 1.4e-30 136.3 93 65.6
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 1.4e-30 136.3 93 65.6
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 1.4e-30 136.3 93 65.6
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 3.0e-30 135.2 93 64.5
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 3.0e-30 135.2 93 64.5
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 3.0e-30 135.2 93 64.5
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 3.0e-30 135.2 93 64.5
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 3.0e-30 135.2 93 64.5
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 5.1e-30 134.4 93 65.6
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 1.5e-29 132.9 99 62.6
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 3.3e-29 131.7 93 64.5
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 6.9e-27 124.0 73 74.0
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.6e-26 122.1 84 70.2
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 4.5e-26 121.3 61 95.1
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 5.9e-26 120.9 82 68.3
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 6.5e-25 117.5 211 33.2
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 1.4e-24 116.3 78 65.4
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 2.5e-24 115.5 68 76.5
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 5.5e-24 114.4 93 55.9
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 2.2e-20 102.4 61 73.8
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.8e-20 101.3 61 72.1
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 6.9e-19 97.4 72 62.5
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 3.0e-14 82.0 72 45.8
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 3.9e-14 81.6 82 47.6
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 1.4e-11 73.2 67 53.7
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 5.0e-09 64.7 58 46.6
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 1.4e-06 56.6 31 64.5


User provided reference genes

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