Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 7.0e-287 989.9 510 100.0
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 3.4e-140 502.7 459 62.1
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 4.6e-121 439.1 433 58.0
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 1.7e-99 367.5 499 48.5
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 2.7e-97 360.1 446 48.4
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 1.1e-95 354.8 545 43.3
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 1.2e-92 344.7 499 46.7
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 1.1e-90 338.2 473 46.7
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 4.6e-89 332.8 462 46.1
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 1.8e-88 330.9 480 43.8
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 4.3e-87 326.2 438 47.0
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 5.7e-87 325.9 472 45.3
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 3.7e-86 323.2 468 44.7
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 4.5e-84 316.2 485 43.9
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 7.7e-84 315.5 472 46.2
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 1.3e-83 314.7 481 43.5
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 2.9e-83 313.5 499 42.9
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 2.5e-82 310.5 486 43.0
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 4.2e-82 309.7 474 44.5
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 3.6e-81 306.6 449 43.9
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 6.1e-81 305.8 472 42.4
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 1.4e-80 304.7 470 42.3
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 1.5e-79 301.2 569 39.2
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 2.6e-79 300.4 479 42.6
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 2.6e-79 300.4 457 44.9
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 3.3e-79 300.1 480 42.7
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 3.3e-79 300.1 452 44.0
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 3.7e-78 296.6 461 42.3
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 9.1e-77 292.0 465 43.7
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 9.1e-77 292.0 474 43.5
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 5.9e-76 289.3 452 42.7
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.3e-75 288.1 465 42.8
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.3e-75 288.1 475 41.7
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 2.9e-75 287.0 468 42.9
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 3.8e-75 286.6 498 42.0
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 4.2e-74 283.1 465 40.0
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 9.4e-74 282.0 392 47.7
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 3.0e-72 276.9 472 41.1
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 8.8e-72 275.4 478 38.7
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 1.1e-71 275.0 454 41.6
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 2.0e-71 274.2 485 40.6
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 2.0e-71 274.2 454 41.2
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 2.6e-71 273.9 470 41.1
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 7.4e-71 272.3 445 42.2
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 7.4e-71 272.3 475 39.2
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 9.7e-71 271.9 488 41.0
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 2.2e-70 270.8 509 38.3
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 3.7e-70 270.0 451 40.4
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 6.3e-70 269.2 463 41.3
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 8.2e-70 268.9 447 40.7
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 4.1e-69 266.5 494 40.7
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 9.1e-69 265.4 511 39.5
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 1.6e-68 264.6 461 39.7
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.0e-68 264.2 465 39.6
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 2.6e-68 263.8 451 40.1
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 4.5e-68 263.1 492 39.8
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 1.7e-67 261.2 527 35.9
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 3.8e-67 260.0 370 45.9
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.9e-66 257.7 464 41.2
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 3.0e-64 250.4 469 39.9
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 5.2e-64 249.6 473 36.2
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 5.2e-64 249.6 459 39.9
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 1.2e-63 248.4 462 39.6
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 3.3e-63 246.9 457 38.7
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 3.1e-61 240.4 328 45.7
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 7.0e-61 239.2 451 39.2
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 7.0e-61 239.2 327 45.9
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 5.9e-60 236.1 374 43.9
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 5.9e-60 236.1 413 39.0
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 1.7e-59 234.6 592 34.3
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 1.0e-56 225.3 351 41.6
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.4e-56 224.9 482 38.8
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 1.5e-50 204.9 394 37.8
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 4.2e-50 203.4 370 37.0
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 4.2e-50 203.4 311 43.4
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 1.2e-49 201.8 255 51.4
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.6e-49 201.4 411 38.9
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 7.5e-47 192.6 313 42.2
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 4.5e-44 183.3 293 39.9
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 3.3e-42 177.2 454 35.7
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 7.3e-42 176.0 256 46.9
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 7.5e-39 166.0 536 28.9
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 1.3e-38 165.2 193 50.8
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 2.2e-38 164.5 443 33.6
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 4.9e-38 163.3 469 35.0
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 1.2e-36 158.7 179 50.8
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 3.0e-35 154.1 283 38.5
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 2.4e-29 134.4 290 34.8
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 3.0e-27 127.5 179 47.5
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 1.8e-24 118.2 183 41.5
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 2.6e-23 114.4 141 43.3
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 1.1e-21 109.0 178 45.5
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 1.3e-19 102.1 157 41.4
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 5.8e-15 86.7 118 44.1
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 7.3e-10 69.7 204 28.9
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 3.6e-09 67.4 102 44.1
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 3.1e-08 64.3 123 37.4
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 3.1e-08 64.3 373 23.9
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 3.4e-07 60.8 78 44.9
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 5.8e-07 60.1 86 40.7
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 3.8e-06 57.4 254 28.3
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 3.8e-06 57.4 115 33.9


User provided reference genes

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