Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 5.3e-188 661.0 360 100.0
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 2.8e-125 452.6 362 70.2
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 1.2e-104 384.0 363 57.3
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 5.4e-100 368.6 358 56.1
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 1.0e-98 364.4 371 53.9
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 5.6e-81 305.4 461 44.3
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 3.8e-77 292.7 352 48.9
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 2.5e-73 280.0 351 47.3
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 6.2e-72 275.4 348 45.4
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 8.1e-72 275.0 348 49.4
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 8.1e-72 275.0 359 45.4
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 1.5e-70 270.8 359 43.7
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 2.6e-70 270.0 346 44.8
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 2.6e-70 270.0 353 43.9
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 5.8e-70 268.9 347 45.8
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.3e-69 267.7 357 45.9
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 1.3e-69 267.7 345 45.5
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 1.7e-69 267.3 363 44.9
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 2.9e-69 266.5 354 45.2
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 3.8e-69 266.2 345 43.5
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 3.8e-69 266.2 373 44.2
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 1.1e-68 264.6 359 43.5
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 1.4e-68 264.2 362 44.2
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 5.4e-68 262.3 357 42.3
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 7.1e-68 261.9 360 43.6
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 2.7e-67 260.0 365 45.2
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 7.9e-67 258.5 356 45.2
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 1.7e-66 257.3 361 43.5
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 3.9e-66 256.1 351 44.7
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 3.9e-66 256.1 352 44.9
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 5.1e-66 255.8 346 43.6
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 2.1e-64 250.4 361 41.6
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 2.8e-64 250.0 359 42.6
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 4.8e-64 249.2 347 44.7
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 3.1e-63 246.5 348 43.7
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 3.1e-63 246.5 364 43.4
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 3.1e-63 246.5 349 43.6
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 5.3e-63 245.7 354 43.2
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 5.3e-63 245.7 404 40.8
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 9.0e-63 245.0 353 42.8
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 2.0e-62 243.8 348 43.4
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 5.8e-62 242.3 349 40.4
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 5.8e-62 242.3 355 41.7
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 1.7e-61 240.7 367 42.2
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 2.2e-61 240.4 357 39.2
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 2.4e-60 236.9 354 42.1
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 5.5e-60 235.7 350 42.6
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 5.5e-60 235.7 354 40.7
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 4.6e-59 232.6 356 43.3
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 3.9e-58 229.6 345 39.1
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 1.9e-57 227.3 351 41.6
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 1.9e-57 227.3 343 44.3
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 7.4e-57 225.3 336 42.9
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 2.1e-56 223.8 348 42.5
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 3.7e-56 223.0 359 40.7
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 4.8e-56 222.6 345 40.0
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 4.8e-56 222.6 343 39.1
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 8.1e-56 221.9 348 40.2
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 3.1e-55 219.9 348 42.0
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 3.1e-55 219.9 356 38.5
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 4.0e-55 219.5 346 39.6
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 4.0e-55 219.5 361 40.2
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 4.0e-55 219.5 348 42.2
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 4.0e-55 219.5 357 40.9
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.5e-54 217.6 343 39.4
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 1.5e-54 217.6 343 38.5
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 1.5e-54 217.6 315 42.9
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 1.5e-54 217.6 349 39.0
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 2.6e-54 216.9 343 38.8
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 7.6e-54 215.3 348 39.4
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 1.3e-53 214.5 334 41.6
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 1.7e-53 214.2 352 38.1
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 2.9e-53 213.4 348 38.8
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 1.1e-52 211.5 350 38.6
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 3.2e-52 209.9 358 38.5
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 4.2e-52 209.5 342 39.2
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 4.2e-52 209.5 343 38.2
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 4.2e-52 209.5 342 39.5
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 4.2e-52 209.5 343 39.1
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 1.2e-51 208.0 344 38.4
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 1.6e-51 207.6 354 38.7
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 1.6e-51 207.6 395 36.2
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 2.1e-51 207.2 317 42.0
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 2.3e-50 203.8 343 38.2
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 3.3e-49 199.9 345 39.4
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 9.6e-49 198.4 357 37.5
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 2.8e-48 196.8 342 38.6
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 6.9e-47 192.2 278 41.4
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 1.3e-45 188.0 291 39.9
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 8.4e-45 185.3 342 37.4
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 2.5e-44 183.7 193 51.8
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 3.2e-44 183.3 361 36.3
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 1.6e-43 181.0 395 36.2
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 2.1e-43 180.6 345 34.5
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 2.7e-43 180.3 262 42.7
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 3.5e-43 179.9 359 34.3
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 4.6e-43 179.5 345 34.5
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 6.1e-43 179.1 369 33.1
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 7.9e-43 178.7 256 39.5
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 3.9e-42 176.4 343 35.6
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 1.5e-41 174.5 340 35.6
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 5.7e-41 172.6 341 34.9
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 2.4e-39 167.2 187 50.3
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 3.1e-39 166.8 318 34.0
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 4.1e-39 166.4 343 33.5
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 1.7e-37 161.0 285 38.6
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 3.8e-37 159.8 280 38.6
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 5.0e-37 159.5 229 42.4
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 9.4e-36 155.2 349 34.7
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 3.6e-35 153.3 221 42.1
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 1.4e-34 151.4 278 37.8
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.3e-34 150.6 221 43.9
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 2.8e-32 143.7 212 42.0
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 1.1e-31 141.7 224 41.5
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 3.0e-26 123.6 256 35.5
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.7e-21 107.8 285 29.1
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 2.2e-21 107.5 143 42.0
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 3.8e-21 106.7 247 33.2
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 3.8e-21 106.7 247 33.2
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 3.8e-21 106.7 247 33.2
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 3.8e-21 106.7 247 33.2
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 3.2e-20 103.6 217 35.0
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 1.6e-19 101.3 116 49.1
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 1.4e-18 98.2 400 26.0
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 4.0e-18 96.7 93 51.6
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 1.1e-17 95.1 202 33.7
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 3.3e-17 93.6 95 54.7
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 4.4e-17 93.2 114 45.6
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.7e-16 91.3 172 37.2
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 2.4e-15 87.4 385 24.9
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 1.7e-13 81.3 168 35.7
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 1.1e-12 78.6 196 30.1
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 2.6e-09 67.4 197 26.9
BcaB04g18591 Brassica carinata HOM05D000144 ORTHO05D006884 2.4e-07 60.8 141 34.8
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 5.9e-06 56.2 71 45.1


User provided reference genes

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