Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold335G49138 Striga asiatica HOM05D028422 ORTHO05D004107 9.2e-74 280.0 132 100.0
SGA_v2.0_scaffold1G00311 Striga asiatica HOM05D028422 ORTHO05D004107 2.5e-63 245.4 117 97.4
SGA_v2.0_scaffold29G12075 Striga asiatica HOM05D028422 ORTHO05D004107 3.1e-61 238.4 121 92.6
SGA_v2.0_scaffold13G06774 Striga asiatica HOM05D024400 ORTHO05D004107 1.7e-14 83.2 112 33.0
Dinv11430 Davidia involucrata HOM05D008850 ORTHO05D004107 2.0e-12 76.3 108 33.3
Dinv24545 Davidia involucrata HOM05D008850 ORTHO05D004107 2.0e-12 76.3 108 31.5
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 1.1e-10 70.5 98 32.7
Dinv12394 Davidia involucrata HOM05D008850 ORTHO05D004107 4.2e-10 68.6 103 31.1
Dinv21773 Davidia involucrata HOM05D008850 ORTHO05D004107 4.2e-10 68.6 98 31.6
Hma1.2p1_0512F.1_g169320 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-09 67.0 113 30.1
Hma1.2p1_0071F.1_g038190 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-09 66.6 113 30.1
Dinv01152 Davidia involucrata HOM05D008850 ORTHO05D004107 4.7e-09 65.1 98 30.6
CAN.G113.5 Capsicum annuum HOM05D028422 ORTHO05D004107 8.0e-09 64.3 118 30.5
Dinv05208 Davidia involucrata HOM05D008850 ORTHO05D004107 1.0e-08 63.9 99 31.3
HanXRQChr08g0224731 Helianthus annuus HOM05D008850 ORTHO05D004107 1.0e-08 63.9 110 31.8
Dinv17963 Davidia involucrata HOM05D008850 ORTHO05D004107 2.3e-08 62.8 94 35.1
Dinv22791 Davidia involucrata HOM05D000017 ORTHO05D000013 5.2e-08 61.6 101 33.7
RhsimUnG0208000 Rhododendron simsii HOM05D008850 ORTHO05D004107 1.2e-07 60.5 100 26.0
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-07 59.7 97 34.0
Dinv18502 Davidia involucrata HOM05D008850 ORTHO05D004107 3.3e-07 58.9 97 30.9
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.3e-07 58.9 95 33.7
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.3e-07 58.9 95 33.7
Dinv11221 Davidia involucrata HOM05D000017 ORTHO05D012861 4.4e-07 58.5 101 30.7
Dinv31502 Davidia involucrata HOM05D025573 ORTHO05D004107 4.4e-07 58.5 48 45.8
ECA248G0790 Erigeron canadensis HOM05D000038 ORTHO05D000143 7.5e-07 57.8 99 31.3
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 1.3e-06 57.0 123 27.6
FAN03G2854 Fragaria x ananassa HOM05D008813 ORTHO05D010456 1.7e-06 56.6 114 27.2
Hma1.2p1_0525F.1_g172635 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.2e-06 56.2 89 30.3
Hma1.2p1_0973F.1_g242990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.2e-06 56.2 89 30.3
Dinv37592 Davidia involucrata HOM05D001916 ORTHO05D003272 3.7e-06 55.5 87 31.0
RcHm_v2.0_Chr1g0352511 Rosa chinensis HOM05D000017 ORTHO05D000013 6.3e-06 54.7 115 30.4
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 6.3e-06 54.7 110 28.2
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 6.3e-06 54.7 110 28.2
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 6.3e-06 54.7 110 28.2
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 8.2e-06 54.3 110 28.2


User provided reference genes

Program Settings