Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold335G49103 Striga asiatica HOM05D001579 ORTHO05D003470 3.1e-113 411.8 199 100.0
MSTRG.16808 Avicennia marina HOM05D001579 ORTHO05D003470 2.6e-27 126.3 72 83.3
SGA_v2.0_scaffold58G20534 Striga asiatica HOM05D001579 ORTHO05D003470 8.3e-26 121.3 67 86.6
Oeu041647.1 Olea europaea HOM05D001579 ORTHO05D003470 1.4e-25 120.6 68 83.8
Migut.B00751 Erythranthe guttata HOM05D001579 ORTHO05D003470 2.4e-25 119.8 72 79.2
Cc02_g25820 Coffea canephora HOM05D001579 ORTHO05D003470 1.2e-24 117.5 72 76.4
Peaxi162Scf00016g00732 Petunia axillaris HOM05D001579 ORTHO05D003470 1.0e-23 114.4 89 64.0
SalBow6G0592 Salvia bowleyana HOM05D001579 ORTHO05D003470 1.0e-23 114.4 72 76.4
SalBow6G1678 Salvia bowleyana HOM05D001579 ORTHO05D003470 1.0e-23 114.4 72 76.4
Nitab4.5_0000974g0080 Nicotiana tabacum HOM05D001579 ORTHO05D003470 2.9e-23 112.8 72 73.6
Nitab4.5_0004172g0030 Nicotiana tabacum HOM05D001579 ORTHO05D003470 2.9e-23 112.8 72 72.2
Nitab4.5_0011688g0020 Nicotiana tabacum HOM05D001579 ORTHO05D003470 2.9e-23 112.8 72 73.6
Prupe.8G096800 Prunus persica HOM05D001579 ORTHO05D003470 3.8e-23 112.5 72 77.8
GSVIVG01031967001 Vitis vinifera HOM05D001579 ORTHO05D003470 3.8e-23 112.5 73 74.0
Solyc02g090860.3 Solanum lycopersicum HOM05D001579 ORTHO05D003470 1.1e-22 110.9 72 72.2
Solyc10g007060.4 Solanum lycopersicum HOM05D001579 ORTHO05D003470 1.1e-22 110.9 72 72.2
Sopen02g035480 Solanum pennellii HOM05D001579 ORTHO05D003470 1.1e-22 110.9 72 72.2
Sopen10g002960 Solanum pennellii HOM05D001579 ORTHO05D003470 1.1e-22 110.9 72 72.2
PGSC0003DMG400004021 Solanum tuberosum HOM05D001579 ORTHO05D003470 1.9e-22 110.2 72 72.2
Atru.chr5.3017 Acer truncatum HOM05D001579 ORTHO05D003470 2.5e-22 109.8 72 73.6
Lj2C359T3 Lonicera japonica HOM05D001579 ORTHO05D003470 2.5e-22 109.8 72 75.0
Lj7A253G28 Lonicera japonica HOM05D001579 ORTHO05D003470 2.5e-22 109.8 72 75.0
Nn1g01939 Nelumbo nucifera HOM05D001579 ORTHO05D003470 2.5e-22 109.8 80 67.5
Sc13g0008990 Simmondsia chinensis HOM05D001579 ORTHO05D003470 2.5e-22 109.8 72 72.2
Actinidia27894 Actinidia chinensis HOM05D001579 ORTHO05D003470 3.3e-22 109.4 71 71.8
Lj7A248G13 Lonicera japonica HOM05D001579 ORTHO05D003470 4.3e-22 109.0 72 75.0
PGSC0003DMG400025010 Solanum tuberosum HOM05D001579 ORTHO05D003470 4.3e-22 109.0 72 70.8
Actinidia00524 Actinidia chinensis HOM05D001579 ORTHO05D003470 5.6e-22 108.6 72 70.8
CSS0049673 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 5.6e-22 108.6 68 72.1
CAN.G1298.23 Capsicum annuum HOM05D001579 ORTHO05D003470 5.6e-22 108.6 88 61.4
CAN.G1412.7 Capsicum annuum HOM05D001579 ORTHO05D003470 5.6e-22 108.6 72 72.2
HanXRQChr14g0437911 Helianthus annuus HOM05D001579 ORTHO05D003470 5.6e-22 108.6 72 73.6
TAR628G1064 Trochodendron aralioides HOM05D001579 ORTHO05D003470 5.6e-22 108.6 74 66.2
CANSAT80G0427 Cannabis sativa HOM05D001579 ORTHO05D003470 7.3e-22 108.2 72 72.2
Cpa.g.sc62.152 Carica papaya HOM05D001579 ORTHO05D003470 1.2e-21 107.5 71 73.2
Hund11566 Selenicereus undatus HOM05D001579 ORTHO05D003470 2.1e-21 106.7 72 72.2
THA.LOC104804143 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 2.1e-21 106.7 71 73.2
TAR376G1017 Trochodendron aralioides HOM05D001579 ORTHO05D003470 2.1e-21 106.7 74 64.9
CSS0031219 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 2.8e-21 106.3 68 72.1
HanXRQChr14g0446281 Helianthus annuus HOM05D001579 ORTHO05D003470 2.8e-21 106.3 71 70.4
Psat7g141360 Pisum sativum HOM05D001579 ORTHO05D003470 2.8e-21 106.3 72 72.2
THA.LOC104824827 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 2.8e-21 106.3 71 73.2
Thecc.02G085100 Theobroma cacao HOM05D001579 ORTHO05D003470 2.8e-21 106.3 72 70.8
Hma1.2p1_0633F.1_g192550 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 3.6e-21 105.9 72 68.1
Hma1.2p1_1375F.1_g279070 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 3.6e-21 105.9 72 68.1
Hund14641 Selenicereus undatus HOM05D001579 ORTHO05D003470 3.6e-21 105.9 72 70.8
TWI79G0010 Tripterygium wilfordii HOM05D001579 ORTHO05D003470 3.6e-21 105.9 72 73.6
VMungo1127G1806 Vigna mungo HOM05D001579 ORTHO05D003470 3.6e-21 105.9 88 63.6
Ciclev10028310m.g Citrus clementina HOM05D001579 ORTHO05D003470 4.7e-21 105.5 72 69.4
Medtr4g070040 Medicago truncatula HOM05D001579 ORTHO05D003470 4.7e-21 105.5 72 70.8
Gohir.A04G130900 Gossypium hirsutum HOM05D001579 ORTHO05D003470 6.1e-21 105.1 72 70.8
Gohir.D04G167200 Gossypium hirsutum HOM05D001579 ORTHO05D003470 6.1e-21 105.1 72 70.8
Gorai.012G155500 Gossypium raimondii HOM05D001579 ORTHO05D003470 6.1e-21 105.1 72 70.8
DCAR_006199 Daucus carota HOM05D001579 ORTHO05D003470 8.0e-21 104.8 71 71.8
Eucgr.D00245 Eucalyptus grandis HOM05D001579 ORTHO05D003470 8.0e-21 104.8 78 66.7
Duzib132G0542 Durio zibethinus HOM05D001579 ORTHO05D003470 1.0e-20 104.4 72 69.4
PGR042G0613 Punica granatum HOM05D001579 ORTHO05D003470 1.0e-20 104.4 72 70.8
Sed0021732 Sechium edule HOM05D001579 ORTHO05D003470 1.0e-20 104.4 72 72.2
TPR.G19411 Trifolium pratense HOM05D001579 ORTHO05D003470 1.4e-20 104.0 72 69.4
MD05G1066200 Malus domestica HOM05D001579 ORTHO05D003470 1.8e-20 103.6 72 70.8
CsaV3_3G002020 Cucumis sativus L. HOM05D001579 ORTHO05D003470 2.3e-20 103.2 84 64.3
Duzib052G0487 Durio zibethinus HOM05D001579 ORTHO05D003470 2.3e-20 103.2 72 69.4
Glyma.12G043200 Glycine max HOM05D001579 ORTHO05D003470 3.0e-20 102.8 88 61.4
Phvul.011G045200 Phaseolus vulgaris HOM05D001579 ORTHO05D003470 3.0e-20 102.8 88 61.4
Ca_01102_v3 Cicer arietinum L. HOM05D001579 ORTHO05D003470 4.0e-20 102.4 72 68.1
MD10G1076200 Malus domestica HOM05D001579 ORTHO05D003470 5.2e-20 102.1 72 70.8
Lalb_Chr03g0025691 Lupinus albus HOM05D001579 ORTHO05D003470 6.8e-20 101.7 72 68.1
Manes.17G101200 Manihot esculenta HOM05D001579 ORTHO05D003470 6.8e-20 101.7 72 69.4
TPR.G23438 Trifolium pratense HOM05D001579 ORTHO05D003470 6.8e-20 101.7 72 70.8
MELO3C013873.2 Cucumis melo HOM05D001579 ORTHO05D003470 1.2e-19 100.9 84 63.1
Lalb_Chr01g0002541 Lupinus albus HOM05D001579 ORTHO05D003470 1.2e-19 100.9 72 66.7
ATR0051G048 Amborella trichopoda HOM05D001579 ORTHO05D003470 1.5e-19 100.5 72 63.9
Glyma.17G231300 Glycine max HOM05D001579 ORTHO05D003470 1.5e-19 100.5 88 55.7
Lj1g0020223 Lotus japonicus HOM05D001579 ORTHO05D003470 2.0e-19 100.1 72 66.7
Lj3g0013700 Lotus japonicus HOM05D001579 ORTHO05D003470 2.0e-19 100.1 72 66.7
CDE04G1236 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 3.4e-19 99.4 72 65.3
Glyma.11G117800 Glycine max HOM05D001579 ORTHO05D003470 3.4e-19 99.4 88 59.1
Ah.12g056180 Amaranthus hybridus HOM05D001579 ORTHO05D003470 4.4e-19 99.0 72 65.3
arahy.Tifrunner.gnm1.ann1.D5Q7RU Arachis hypogaea HOM05D001579 ORTHO05D003470 5.7e-19 98.6 72 65.3
COL.COLO4_25932 Corchorus olitorius HOM05D001579 ORTHO05D003470 5.7e-19 98.6 72 66.7
ECA240G1027 Erigeron canadensis HOM05D001579 ORTHO05D003470 7.5e-19 98.2 72 65.3
Haze_02385 Corylus avellana HOM05D001579 ORTHO05D003470 1.7e-18 97.1 79 63.3
Ah.02g117280 Amaranthus hybridus HOM05D001579 ORTHO05D003470 2.2e-18 96.7 72 63.9
arahy.Tifrunner.gnm1.ann1.IB6GCN Arachis hypogaea HOM05D001579 ORTHO05D003470 2.2e-18 96.7 74 64.9
Aa31LG7G14810 Aethionema arabicum HOM05D001579 ORTHO05D003470 4.9e-18 95.5 71 67.6
AL7G11270 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 4.9e-18 95.5 67 71.6
Cfa005003 Carpinus fangiana HOM05D001579 ORTHO05D003470 4.9e-18 95.5 79 62.0
AT4G39280 Arabidopsis thaliana HOM05D001579 ORTHO05D003470 6.4e-18 95.1 67 70.1
EL10Ac3g05071 Beta vulgaris HOM05D001579 ORTHO05D003470 8.3e-18 94.7 74 60.8
CiPaw.05G064600 Carya illinoinensis HOM05D001579 ORTHO05D003470 1.1e-17 94.4 72 62.5
FAN11G3917 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.2e-17 92.8 82 59.8
FAN16G0460 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.2e-17 92.8 82 59.8
FAN16G2055 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.2e-17 92.8 82 59.8
FAN21G0623 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.2e-17 92.8 82 59.8
Carub.0007s0120 Capsella rubella HOM05D001579 ORTHO05D003470 4.1e-17 92.4 67 68.7
FvH4_3g28200 Fragaria vesca HOM05D001579 ORTHO05D003470 4.1e-17 92.4 82 59.8
ClCG10G001880 Citrullus lanatus HOM05D001579 ORTHO05D003470 7.0e-17 91.7 101 54.5
Carub.0004s0076 Capsella rubella HOM05D001579 ORTHO05D003470 1.2e-16 90.9 70 65.7
CARHR247410 Cardamine hirsuta HOM05D001579 ORTHO05D003470 1.6e-16 90.5 67 68.7
Potri.009G116100 Populus trichocarpa HOM05D001579 ORTHO05D003470 1.6e-16 90.5 72 62.5
AUR62034190 Chenopodium quinoa HOM05D001579 ORTHO05D003470 2.0e-16 90.1 84 54.8
FvH4_2g08790 Fragaria vesca HOM05D001579 ORTHO05D003470 1.0e-15 87.8 88 53.4
BraA09t41189Z Brassica rapa HOM05D001579 ORTHO05D003470 1.7e-15 87.0 89 57.3
Rhsim11G0177200 Rhododendron simsii HOM05D001579 ORTHO05D003470 1.7e-15 87.0 57 70.2
Sp4g00870 Schrenkiella parvula HOM05D001579 ORTHO05D003470 1.7e-15 87.0 89 55.1
QL11p043704 Quercus lobata HOM05D001579 ORTHO05D003470 2.3e-15 86.7 79 57.0
A09p57990 Brassica napus HOM05D001579 ORTHO05D003470 3.0e-15 86.3 89 57.3
Duzib248G0143 Durio zibethinus HOM05D001579 ORTHO05D003470 3.9e-15 85.9 72 59.7
Potri.004G155000 Populus trichocarpa HOM05D001579 ORTHO05D003470 3.9e-15 85.9 72 58.3
FAN24G0111 Fragaria x ananassa HOM05D001579 ORTHO05D003470 6.6e-15 85.1 88 52.3
ATR1101G014 Amborella trichopoda HOM05D001579 ORTHO05D003470 8.6e-15 84.7 72 55.6
CDE06G1318 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 8.6e-15 84.7 57 68.4
FAN27G2756 Fragaria x ananassa HOM05D001579 ORTHO05D003470 8.6e-15 84.7 82 56.1
Sabra04G0102800 Salix brachista HOM05D001579 ORTHO05D003470 8.6e-15 84.7 62 62.9
FAN15G0032 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.1e-14 84.3 82 54.9
BcaC07g41119 Brassica carinata HOM05D001579 ORTHO05D003470 1.5e-14 84.0 89 56.2
C08p41200 Brassica napus HOM05D001579 ORTHO05D003470 1.5e-14 84.0 89 56.2
BolC8t51687H Brassica oleracea HOM05D001579 ORTHO05D003470 1.5e-14 84.0 89 56.2
SMO119G0093 Selaginella moellendorffii HOM05D001579 ORTHO05D003470 1.5e-14 84.0 73 54.8
RcHm_v2.0_Chr7g0204471 Rosa chinensis HOM05D001579 ORTHO05D003470 1.9e-14 83.6 81 54.3
FAN20G1104 Fragaria x ananassa HOM05D001579 ORTHO05D003470 2.5e-14 83.2 82 53.7
SHI02914 Sapria himalayana HOM05D001579 ORTHO05D003470 2.5e-14 83.2 72 55.6
AL7G31990 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 4.3e-14 82.4 73 60.3
C09p46380 Brassica napus HOM05D001579 ORTHO05D003470 4.3e-14 82.4 89 52.8
BcaB08g35003 Brassica carinata HOM05D001579 ORTHO05D003470 5.6e-14 82.0 89 55.1
AUR62003165 Chenopodium quinoa HOM05D001579 ORTHO05D003470 7.3e-14 81.6 59 64.4
RcHm_v2.0_Chr6g0264251 Rosa chinensis HOM05D001579 ORTHO05D003470 7.3e-14 81.6 66 59.1
Oeu015994.1 Olea europaea HOM05D001579 ORTHO05D003470 9.5e-14 81.3 64 70.3
Mapoly0012s0145 Marchantia polymorpha HOM05D001579 ORTHO05D003470 1.6e-13 80.5 84 53.6
BcaC02g08772 Brassica carinata HOM05D001579 ORTHO05D003470 2.8e-13 79.7 90 48.9
C04p50830 Brassica napus HOM05D001579 ORTHO05D003470 2.8e-13 79.7 90 48.9
BolC4t26677H Brassica oleracea HOM05D001579 ORTHO05D003470 2.8e-13 79.7 90 48.9
BcaB06g27782 Brassica carinata HOM05D001579 ORTHO05D003470 4.7e-13 79.0 90 48.9
PSO447G0328 Papaver somniferum HOM05D001579 ORTHO05D003470 4.7e-13 79.0 62 59.7
A03p60490 Brassica napus HOM05D001579 ORTHO05D017611 6.2e-13 78.6 81 55.6
A04p16340 Brassica napus HOM05D001579 ORTHO05D003470 6.2e-13 78.6 90 47.8
CSS0013099 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 6.2e-13 78.6 68 55.9
BcaC03g13561 Brassica carinata HOM05D001579 ORTHO05D017611 8.0e-13 78.2 89 51.7
C02p09550 Brassica napus HOM05D001579 ORTHO05D017611 8.0e-13 78.2 89 51.7
Carub.0005s1088 Capsella rubella HOM05D001579 ORTHO05D003470 8.0e-13 78.2 73 56.2
A10p05500 Brassica napus HOM05D001579 ORTHO05D017611 1.4e-12 77.4 81 54.3
BraA01t04658Z Brassica rapa HOM05D001579 ORTHO05D017611 2.3e-12 76.6 89 51.7
BraA04t17272Z Brassica rapa HOM05D001579 ORTHO05D003470 5.2e-12 75.5 90 46.7
Aqoxy7G01384 Aquilegia oxysepala HOM05D001579 ORTHO05D003470 6.8e-12 75.1 72 47.2
BNapus_Darmor_BZH_scaffold_97p00330 Brassica napus HOM05D001579 ORTHO05D017611 6.8e-12 75.1 72 58.3
Os10g0400800 Oryza sativa ssp. japonica HOM05D001579 ORTHO05D003470 1.2e-11 74.3 71 49.3
AUR62034498 Chenopodium quinoa HOM05D001579 ORTHO05D003470 2.0e-11 73.6 58 62.1
Nitab4.5_0000308g0090 Nicotiana tabacum HOM05D001579 ORTHO05D003470 4.4e-11 72.4 93 45.2
AagrBONN_evm.TU.Sc2ySwM_344.2010 Anthoceros agrestis HOM05D001579 ORTHO05D003470 2.2e-10 70.1 73 49.3
BraA10t42813Z Brassica rapa HOM05D001579 ORTHO05D017611 2.9e-10 69.7 50 72.0
PSO478G3633 Papaver somniferum HOM05D001579 ORTHO05D003470 2.9e-10 69.7 62 53.2
A04p16550 Brassica napus HOM05D001264 ORTHO05D017611 3.7e-10 69.3 50 72.0
A09p15640 Brassica napus HOM05D001579 ORTHO05D017611 3.7e-10 69.3 58 63.8
CBR_g23301 Chara braunii HOM05D001579 ORTHO05D003470 6.4e-10 68.6 72 51.4
AUR62007985 Chenopodium quinoa HOM05D001579 ORTHO05D003470 6.4e-10 68.6 96 40.6
BraA09t37204Z Brassica rapa HOM05D001579 ORTHO05D003470 1.1e-09 67.8 58 62.1
Zm00001eb255720 Zea mays HOM05D001579 ORTHO05D003470 1.1e-09 67.8 71 46.5
BcaB01g00883 Brassica carinata HOM05D001579 ORTHO05D003470 2.4e-09 66.6 58 62.1
Thhalv10007412m.g Eutrema salsugineum HOM05D001579 ORTHO05D003470 2.4e-09 66.6 68 51.5
Pp3c2_16770 Physcomitrium patens HOM05D001579 ORTHO05D003470 3.2e-09 66.2 73 47.9
MCO10G005 Micromonas commoda HOM05D001579 ORTHO05D003470 9.2e-09 64.7 74 44.6
Cre09.g389430 Chlamydomonas reinhardtii HOM05D001579 ORTHO05D003470 3.5e-08 62.8 67 49.3
BcaB03g12963 Brassica carinata HOM05D001579 ORTHO05D003470 3.0e-07 59.7 84 46.4
Aa31LG3G6010 Aethionema arabicum HOM05D001579 ORTHO05D003470 3.9e-07 59.3 44 61.4
MBI01_g34891_MAGBIO Magnolia biondii HOM05D001579 ORTHO05D003470 5.0e-07 58.9 44 61.4
AL4G10950 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 1.9e-06 57.0 62 45.2


User provided reference genes

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