Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold334G49079 Striga asiatica HOM05D005172 ORTHO05D006324 1.1e-222 776.2 368 100.0
MSTRG.21697 Avicennia marina HOM05D005172 ORTHO05D006324 9.2e-180 633.6 368 80.2
SalBow3G3203 Salvia bowleyana HOM05D005172 ORTHO05D006324 3.2e-172 608.6 368 75.5
Dinv24461 Davidia involucrata HOM05D005172 ORTHO05D006324 6.0e-155 551.2 363 69.1
Gohir.D07G133500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 1.1e-153 547.0 368 68.8
Gohir.A07G129100 Gossypium hirsutum HOM05D005172 ORTHO05D006324 1.5e-153 546.6 368 68.8
Gorai.001G144800 Gossypium raimondii HOM05D005172 ORTHO05D006324 7.3e-153 544.3 368 68.5
FAN24G1196 Fragaria x ananassa HOM05D005172 ORTHO05D006324 9.6e-153 543.9 368 69.6
FAN24G2042 Fragaria x ananassa HOM05D005172 ORTHO05D006324 9.6e-153 543.9 368 69.6
Nn4g25569 Nelumbo nucifera HOM05D005172 ORTHO05D006324 1.6e-152 543.1 369 66.4
Hma1.2p1_0008F-1.1_g005570 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 4.7e-152 541.6 359 67.7
TWI36G0897 Tripterygium wilfordii HOM05D005172 ORTHO05D006324 8.1e-152 540.8 368 67.4
Thecc.01G315700 Theobroma cacao HOM05D005172 ORTHO05D006324 1.8e-151 539.7 361 68.4
Eucgr.K03551 Eucalyptus grandis HOM05D005172 ORTHO05D006324 6.9e-151 537.7 359 67.4
PGSC0003DMG400009049 Solanum tuberosum HOM05D005172 ORTHO05D006324 9.0e-151 537.3 359 69.1
RcHm_v2.0_Chr6g0249301 Rosa chinensis HOM05D005172 ORTHO05D006324 1.5e-150 536.6 368 68.2
Duzib133G1494 Durio zibethinus HOM05D005172 ORTHO05D006324 2.6e-150 535.8 363 67.5
Lju926A5G28 Lonicera japonica HOM05D005172 ORTHO05D006324 2.6e-150 535.8 360 67.2
PGR044G0670 Punica granatum HOM05D005172 ORTHO05D006324 3.4e-150 535.4 361 68.4
Dinv30897 Davidia involucrata HOM05D005172 ORTHO05D006324 5.8e-150 534.6 361 66.2
Cfa005774 Carpinus fangiana HOM05D005172 ORTHO05D006324 1.7e-149 533.1 365 66.0
Solyc01g079310.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 2.2e-149 532.7 359 69.1
Atru.chr5.994 Acer truncatum HOM05D005172 ORTHO05D006324 2.9e-149 532.3 368 66.0
GSVIVG01031247001 Vitis vinifera HOM05D005172 ORTHO05D006324 2.9e-149 532.3 363 66.1
CAN.G293.20 Capsicum annuum HOM05D005172 ORTHO05D006324 6.4e-149 531.2 362 68.2
Prupe.8G000200 Prunus persica HOM05D005172 ORTHO05D006324 6.4e-149 531.2 364 68.1
Sopen01g031090 Solanum pennellii HOM05D005172 ORTHO05D006324 6.4e-149 531.2 359 68.2
CiPaw.07G118900 Carya illinoinensis HOM05D005172 ORTHO05D006324 8.4e-149 530.8 368 66.0
Duzib211G0527 Durio zibethinus HOM05D005172 ORTHO05D006324 8.4e-149 530.8 363 67.5
FAN19G1206 Fragaria x ananassa HOM05D005172 ORTHO05D006324 8.4e-149 530.8 368 67.4
Manes.05G014300 Manihot esculenta HOM05D005172 ORTHO05D006324 8.4e-149 530.8 372 65.1
Potri.014G118600 Populus trichocarpa HOM05D005172 ORTHO05D006324 4.2e-148 528.5 360 66.1
MD07G1000100 Malus domestica HOM05D005172 ORTHO05D006324 5.4e-148 528.1 364 67.0
Peaxi162Scf01061g00133 Petunia axillaris HOM05D005172 ORTHO05D006324 1.2e-147 526.9 358 65.1
Haze_05066 Corylus avellana HOM05D005172 ORTHO05D006324 1.6e-147 526.6 356 66.6
TAR362G0256 Trochodendron aralioides HOM05D005172 ORTHO05D006324 1.6e-147 526.6 361 65.1
Cc02_g35150 Coffea canephora HOM05D005172 ORTHO05D006324 6.0e-147 524.6 369 64.2
DCAR_001909 Daucus carota HOM05D005172 ORTHO05D006324 1.3e-146 523.5 368 64.7
Nitab4.5_0001338g0130 Nicotiana tabacum HOM05D005172 ORTHO05D006324 3.0e-146 522.3 358 64.8
Nitab4.5_0011508g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 3.0e-146 522.3 360 63.9
Eucgr.H01000 Eucalyptus grandis HOM05D005172 ORTHO05D006324 3.9e-146 521.9 343 68.2
Lalb_Chr21g0309651 Lupinus albus HOM05D005172 ORTHO05D006324 3.9e-146 521.9 373 65.4
Sabra14G0088100 Salix brachista HOM05D005172 ORTHO05D006324 6.6e-146 521.2 359 64.6
Carub.0005s2909 Capsella rubella HOM05D005172 ORTHO05D006324 1.1e-145 520.4 343 67.3
QL12p019456 Quercus lobata HOM05D005172 ORTHO05D006324 1.9e-145 519.6 369 64.2
CAN.G1076.20 Capsicum annuum HOM05D005172 ORTHO05D006324 2.5e-145 519.2 359 63.8
CsaV3_7G030060 Cucumis sativus L. HOM05D005172 ORTHO05D006324 7.3e-145 517.7 347 68.3
MBI18_g32028_MAGBIO Magnolia biondii HOM05D005172 ORTHO05D006324 9.6e-145 517.3 360 65.0
CSS0017820 Camellia sinensis var. sinensis HOM05D005172 ORTHO05D006324 1.3e-144 516.9 365 64.4
AL5G45130 Arabidopsis lyrata HOM05D005172 ORTHO05D006324 1.6e-144 516.5 360 64.7
Manes.01G229300 Manihot esculenta HOM05D005172 ORTHO05D006324 2.1e-144 516.2 365 63.8
Aqoxy2G02725 Aquilegia oxysepala HOM05D005172 ORTHO05D006324 6.2e-144 514.6 359 64.6
A07p25960 Brassica napus HOM05D005172 ORTHO05D006324 1.1e-143 513.8 360 64.7
Solyc01g100590.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 3.1e-143 512.3 357 63.6
CARHR172700 Cardamine hirsuta HOM05D005172 ORTHO05D006324 4.0e-143 511.9 359 64.6
BraA07t30243Z Brassica rapa HOM05D005172 ORTHO05D006324 6.9e-143 511.1 360 64.4
Thhalv10006054m.g Eutrema salsugineum HOM05D005172 ORTHO05D006324 6.9e-143 511.1 360 64.2
Phvul.007G213050 Phaseolus vulgaris HOM05D005172 ORTHO05D006324 1.2e-142 510.4 363 64.7
Sopen01g044090 Solanum pennellii HOM05D005172 ORTHO05D006324 2.0e-142 509.6 357 63.3
PGSC0003DMG400002764 Solanum tuberosum HOM05D005172 ORTHO05D006324 2.0e-142 509.6 357 63.6
DCAR_018281 Daucus carota HOM05D005172 ORTHO05D006324 2.6e-142 509.2 361 64.5
AT3G62370 Arabidopsis thaliana HOM05D005172 ORTHO05D006324 3.4e-142 508.8 360 63.6
BolC6t37994H Brassica oleracea HOM05D005172 ORTHO05D006324 4.5e-142 508.4 360 64.2
Sp5g01030 Schrenkiella parvula HOM05D005172 ORTHO05D006324 4.5e-142 508.4 360 63.9
Ca_10273_v3 Cicer arietinum L. HOM05D005172 ORTHO05D006324 5.8e-142 508.1 349 66.2
BcaB02g07340 Brassica carinata HOM05D005172 ORTHO05D006324 1.7e-141 506.5 360 63.6
FvH4_2g00030 Fragaria vesca HOM05D005172 ORTHO05D006324 2.2e-141 506.1 328 71.3
Glyma.10G011700 Glycine max HOM05D005172 ORTHO05D006324 2.2e-141 506.1 347 65.4
VMungo0720G2990 Vigna mungo HOM05D005172 ORTHO05D006324 2.2e-141 506.1 347 65.1
BcaC08g45198 Brassica carinata HOM05D005172 ORTHO05D006324 2.9e-141 505.8 360 63.9
C06p28240 Brassica napus HOM05D005172 ORTHO05D006324 2.9e-141 505.8 360 63.9
Ah.01g003950 Amaranthus hybridus HOM05D005172 ORTHO05D006324 8.4e-141 504.2 348 66.4
Glyma.02G011100 Glycine max HOM05D005172 ORTHO05D006324 1.1e-140 503.8 369 62.6
Medtr1g086810 Medicago truncatula HOM05D005172 ORTHO05D006324 1.9e-140 503.1 372 62.9
PSO761G0644 Papaver somniferum HOM05D005172 ORTHO05D006324 1.9e-140 503.1 368 63.0
Oeu018081.1 Olea europaea HOM05D005172 ORTHO05D006324 4.2e-140 501.9 360 61.9
Aa31LG10G16300 Aethionema arabicum HOM05D005172 ORTHO05D006324 9.3e-140 500.7 362 63.5
CANSAT25G1511 Cannabis sativa HOM05D005172 ORTHO05D006324 1.2e-139 500.4 360 64.4
AUR62022232 Chenopodium quinoa HOM05D005172 ORTHO05D006324 1.6e-139 500.0 345 67.0
Lj5g0001265 Lotus japonicus HOM05D005172 ORTHO05D006324 2.7e-139 499.2 350 63.7
arahy.Tifrunner.gnm1.ann1.SY690W Arachis hypogaea HOM05D005172 ORTHO05D006324 3.5e-139 498.8 370 62.2
Manes.05G011070 Manihot esculenta HOM05D005172 ORTHO05D006324 1.8e-138 496.5 337 66.2
EL10As5g23554 Beta vulgaris HOM05D005172 ORTHO05D006324 2.3e-138 496.1 356 65.2
Hund09645 Selenicereus undatus HOM05D005172 ORTHO05D006324 2.3e-138 496.1 348 64.7
Psat6g162640 Pisum sativum HOM05D005172 ORTHO05D006324 3.9e-138 495.4 369 61.2
AUR62031944 Chenopodium quinoa HOM05D005172 ORTHO05D006324 6.7e-138 494.6 347 66.0
Manes.05G005607 Manihot esculenta HOM05D005172 ORTHO05D006324 6.7e-138 494.6 329 67.2
Sc17g0000390 Simmondsia chinensis HOM05D005172 ORTHO05D006324 6.7e-138 494.6 342 66.1
Manes.08G002402 Manihot esculenta HOM05D005172 ORTHO05D006324 8.7e-138 494.2 329 67.2
Manes.05G014725 Manihot esculenta HOM05D005172 ORTHO05D006324 2.5e-137 492.7 328 67.1
Sed0009537 Sechium edule HOM05D005172 ORTHO05D006324 3.3e-137 492.3 354 64.1
TAR633G1620 Trochodendron aralioides HOM05D005172 ORTHO05D006324 4.3e-137 491.9 307 69.1
Rhsim11G0096600 Rhododendron simsii HOM05D005172 ORTHO05D006324 2.4e-135 486.1 449 51.7
vmacro01567 Vaccinium macrocarpon HOM05D005172 ORTHO05D006324 2.4e-135 486.1 460 52.2
MSTRG.20376 Avicennia marina HOM05D005172 ORTHO05D006324 3.4e-134 482.3 344 63.7
ATR0693G418 Amborella trichopoda HOM05D005172 ORTHO05D006324 3.5e-131 472.2 369 59.1
Os03g0309000 Oryza sativa ssp. japonica HOM05D005172 ORTHO05D006324 7.9e-131 471.1 334 63.2
Zm00001eb014830 Zea mays HOM05D005172 ORTHO05D006324 1.0e-130 470.7 358 58.7
Ah.02g112400 Amaranthus hybridus HOM05D005172 ORTHO05D006324 3.0e-130 469.2 416 56.0
Gorai.008G138400 Gossypium raimondii HOM05D005172 ORTHO05D006324 8.7e-130 467.6 364 61.5
MELO3C015915.2 Cucumis melo HOM05D005172 ORTHO05D006324 1.9e-129 466.5 364 62.1
CDE08G0763 Ceratophyllum demersum HOM05D005172 ORTHO05D006324 5.6e-129 464.9 341 62.2
Gohir.D12G127500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 5.6e-129 464.9 364 60.7
HPP92_002597 Vanilla planifolia HOM05D005172 ORTHO05D006324 1.1e-127 460.7 363 58.7
Migut.B00958 Erythranthe guttata HOM05D005172 ORTHO05D006324 1.8e-127 459.9 343 60.3
ClCG09G005000 Citrullus lanatus HOM05D005172 ORTHO05D006324 2.4e-127 459.5 354 61.0
Cpa.g.sc18.70 Carica papaya HOM05D005172 ORTHO05D006324 6.9e-127 458.0 361 62.0
SalBow7G2322 Salvia bowleyana HOM05D006337 ORTHO05D008050 4.6e-123 445.3 344 59.3
Actinidia16862 Actinidia chinensis HOM05D005172 ORTHO05D006324 1.5e-118 430.3 316 62.0
Manes.05G006214 Manihot esculenta HOM05D005172 ORTHO05D006324 5.9e-118 428.3 285 67.0
THA.LOC104827661 Tarenaya hassleriana HOM05D005172 ORTHO05D006324 7.6e-118 427.9 267 71.2
Manes.05G008035 Manihot esculenta HOM05D005172 ORTHO05D006324 1.3e-117 427.2 285 66.7
Manes.05G012891 Manihot esculenta HOM05D005172 ORTHO05D006324 1.1e-116 424.1 285 66.3
SEGI_40738 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 1.7e-112 410.2 334 56.0
arahy.Tifrunner.gnm1.ann1.2XA8QH Arachis hypogaea HOM05D005172 ORTHO05D006324 2.9e-109 399.4 266 67.7
HPP92_012811 Vanilla planifolia HOM05D005172 ORTHO05D006324 1.6e-107 393.7 286 62.2
Nitab4.5_0003540g0100 Nicotiana tabacum HOM05D005172 ORTHO05D006324 5.7e-105 385.2 232 74.1
FAN20G2313 Fragaria x ananassa HOM05D005172 ORTHO05D006324 7.2e-100 368.2 234 71.8
unitig_0.g2227 Utricularia gibba HOM05D005172 ORTHO05D003916 6.1e-99 365.2 274 56.9
FAN20G2797 Fragaria x ananassa HOM05D005172 ORTHO05D006324 1.5e-97 360.5 256 66.4
Hma1.2p1_3280F.1_g334820 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 3.3e-97 359.4 324 55.6
Nitab4.5_0006240g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 5.9e-94 348.6 289 60.6
Mapoly0070s0043 Marchantia polymorpha HOM05D005172 ORTHO05D006324 1.0e-93 347.8 338 49.4
SEGI_37594 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 2.8e-88 329.7 265 57.0
SMO119G0084 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 9.1e-87 324.7 365 44.9
Lalb_Chr06g0166961 Lupinus albus HOM05D005172 ORTHO05D006324 3.8e-85 319.3 225 64.9
Ciclev10020948m.g Citrus clementina HOM05D005172 ORTHO05D006324 1.1e-84 317.8 204 69.1
Oeu000005.1 Olea europaea HOM05D005172 ORTHO05D006324 2.5e-84 316.6 230 62.2
Pp3c9_8970 Physcomitrium patens HOM05D005172 ORTHO05D006324 2.1e-83 313.5 326 46.6
Pp3c15_10420 Physcomitrium patens HOM05D005172 ORTHO05D006324 8.0e-83 311.6 359 44.6
AagrBONN_evm.TU.Sc2ySwM_228.5181 Anthoceros agrestis HOM05D005172 ORTHO05D006324 1.1e-79 301.2 317 47.3
COL.COLO4_23212 Corchorus olitorius HOM05D005172 ORTHO05D006324 2.8e-72 276.6 180 70.6
TPR.G38637 Trifolium pratense HOM05D005172 ORTHO05D006324 2.4e-71 273.5 195 63.1
Gohir.A12G123800 Gossypium hirsutum HOM05D005172 ORTHO05D006324 3.1e-71 273.1 208 62.5
Ciclev10024074m.g Citrus clementina HOM05D005172 ORTHO05D006324 3.8e-69 266.2 203 61.6
Peaxi162Scf00691g00617 Petunia axillaris HOM05D005172 ORTHO05D006324 1.6e-62 244.2 241 51.5
Oeu008479.1 Olea europaea HOM05D005172 ORTHO05D006324 5.0e-61 239.2 281 46.6
Ciclev10023330m.g Citrus clementina HOM05D005172 ORTHO05D006324 1.1e-52 211.5 156 61.5
Lalb_Chr06g0166951 Lupinus albus HOM05D005172 ORTHO05D006324 3.4e-49 199.9 161 55.9
CBR_g51501 Chara braunii HOM05D005172 ORTHO05D006324 7.8e-46 188.7 241 43.2
TPR.G38640 Trifolium pratense HOM05D005172 ORTHO05D006324 1.5e-28 131.3 114 54.4
Ciclev10023884m.g Citrus clementina HOM05D005172 ORTHO05D006324 1.5e-25 121.3 106 55.7
COL.COLO4_23213 Corchorus olitorius HOM05D005172 ORTHO05D006324 2.2e-24 117.5 101 54.5
SMO163G0002 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 2.9e-24 117.1 92 52.2
CAN.G1071.4 Capsicum annuum HOM05D005172 ORTHO05D006324 3.0e-21 107.1 100 48.0
CBR_g51503 Chara braunii HOM05D005172 ORTHO05D006324 9.6e-12 75.5 123 34.1


User provided reference genes

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