Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold334G49056 Striga asiatica HOM05D008757 ORTHO05D010583 1.3e-274 949.1 483 100.0
Migut.D00097 Erythranthe guttata HOM05D008757 ORTHO05D010583 1.2e-78 298.1 324 51.9
MSTRG.18114 Avicennia marina HOM05D008757 ORTHO05D010583 7.8e-78 295.4 350 49.1
CSS0028194 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 3.9e-45 186.8 353 36.8
CSS0009821 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 3.3e-44 183.7 353 36.5
Rhsim01G0289500 Rhododendron simsii HOM05D008757 ORTHO05D010583 1.8e-42 177.9 339 35.1
Gohir.D11G115900 Gossypium hirsutum HOM05D008757 ORTHO05D010583 2.9e-40 170.6 321 35.5
Lj1A19T23 Lonicera japonica HOM05D008757 ORTHO05D010583 2.9e-40 170.6 303 33.7
Actinidia25837 Actinidia chinensis HOM05D008757 ORTHO05D010583 3.8e-40 170.2 352 35.2
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 2.4e-39 167.5 345 30.7
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 2.4e-39 167.5 356 34.0
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 1.6e-38 164.9 320 33.1
Gohir.A11G110800 Gossypium hirsutum HOM05D008757 ORTHO05D010583 7.9e-38 162.5 322 35.4
Nitab4.5_0000116g0030 Nicotiana tabacum HOM05D008757 ORTHO05D010583 4.8e-35 153.3 314 35.7
vmacro15123 Vaccinium macrocarpon HOM05D008757 ORTHO05D010583 4.8e-35 153.3 243 40.3
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 1.2e-33 148.7 334 32.3
Haze_05014 Corylus avellana HOM05D008757 ORTHO05D010583 1.3e-32 145.2 339 31.9
Sopen01g031410 Solanum pennellii HOM05D008757 ORTHO05D010583 2.9e-32 144.1 336 33.0
Gorai.007G124100 Gossypium raimondii HOM05D008757 ORTHO05D010583 3.8e-32 143.7 286 35.3
Nitab4.5_0000906g0100 Nicotiana tabacum HOM05D008757 ORTHO05D010583 1.1e-31 142.1 306 35.3
Peaxi162Scf00001g00251 Petunia axillaris HOM05D008757 ORTHO05D010583 1.1e-31 142.1 324 32.7
Solyc01g079630.3 Solanum lycopersicum HOM05D008757 ORTHO05D010583 1.2e-30 138.7 337 32.3
Cc08_g11800 Coffea canephora HOM05D008757 ORTHO05D010583 2.1e-30 137.9 254 35.8
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 6.0e-30 136.3 353 29.2
Sabra02G0159400 Salix brachista HOM05D008757 ORTHO05D010583 1.5e-28 131.7 374 27.8
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 4.3e-28 130.2 352 28.4
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 2.8e-27 127.5 310 31.3
Dinv10074 Davidia involucrata HOM05D008757 ORTHO05D010583 1.4e-26 125.2 165 44.2
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 2.6e-25 120.9 261 32.6
Hma1.2p1_1302F.1_g274300 Hydrangea macrophylla HOM05D008757 ORTHO05D010583 6.5e-24 116.3 160 41.9
Prupe.8G269900 Prunus persica HOM05D008757 ORTHO05D010583 2.7e-22 110.9 162 37.0
FvH4_5g39560 Fragaria vesca HOM05D008757 ORTHO05D010583 3.5e-22 110.5 175 35.4
FAN08G1681 Fragaria x ananassa HOM05D008757 ORTHO05D010583 6.1e-22 109.8 144 38.9
FAN18G1448 Fragaria x ananassa HOM05D008757 ORTHO05D010583 7.9e-22 109.4 144 38.9
FAN13G0940 Fragaria x ananassa HOM05D008757 ORTHO05D010583 8.7e-21 105.9 144 38.2
FAN04G1474 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.9e-20 104.8 144 37.5
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 6.3e-19 99.8 317 27.1
Thhalv10006051m.g Eutrema salsugineum HOM05D012658 ORTHO05D010583 2.0e-17 94.7 188 33.0
BraA09t40861Z Brassica rapa HOM05D012658 ORTHO05D010583 7.7e-17 92.8 165 30.9
RcHm_v2.0_Chr7g0241871 Rosa chinensis HOM05D008757 ORTHO05D010583 1.7e-16 91.7 162 33.3
AL5G45370 Arabidopsis lyrata HOM05D012658 ORTHO05D010583 2.2e-16 91.3 193 31.6
BcaC07g40779 Brassica carinata HOM05D012658 ORTHO05D010583 6.5e-16 89.7 131 34.4
A09p54480 Brassica napus HOM05D012658 ORTHO05D010583 6.5e-16 89.7 181 30.4
BolC8t51315H Brassica oleracea HOM05D012658 ORTHO05D010583 1.4e-15 88.6 131 34.4
CARHR172890 Cardamine hirsuta HOM05D012658 ORTHO05D010583 1.4e-15 88.6 188 30.9
Carub.0005s2928 Capsella rubella HOM05D012658 ORTHO05D010583 2.5e-15 87.8 188 31.4
AT3G62620 Arabidopsis thaliana HOM05D012658 ORTHO05D010583 1.2e-14 85.5 133 33.8
C08p37370 Brassica napus HOM05D012658 ORTHO05D010583 2.7e-14 84.3 131 33.6
BcaC07g40736 Brassica carinata HOM05D012658 ORTHO05D010583 4.6e-14 83.6 163 28.8
MD11G1316900 Malus domestica HOM05D008757 ORTHO05D010583 1.8e-13 81.6 134 31.3
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 3.9e-13 80.5 230 25.7
A05p34600 Brassica napus HOM05D012658 ORTHO05D010583 1.5e-12 78.6 133 31.6
Thecc.01G310700 Theobroma cacao HOM05D008757 ORTHO05D010583 2.0e-09 68.2 110 36.4


User provided reference genes

Program Settings