Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold334G49050 Striga asiatica HOM05D007468 ORTHO05D009051 9.8e-137 490.3 286 100.0
Migut.D00103 Erythranthe guttata HOM05D007468 ORTHO05D009051 7.5e-20 102.1 257 39.7
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 1.3e-19 101.3 192 43.8
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 1.7e-19 100.9 192 43.2
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 6.3e-19 99.0 193 40.9
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 3.5e-17 93.2 199 37.2
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 3.5e-17 93.2 195 37.4
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 5.0e-16 89.4 205 38.5
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 1.6e-14 84.3 143 44.1
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 6.1e-14 82.4 177 37.9
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 1.8e-13 80.9 124 43.5
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 2.3e-13 80.5 143 42.7
CAN.G1209.19 Capsicum annuum HOM05D007468 ORTHO05D009051 4.0e-13 79.7 169 37.9
Nitab4.5_0002828g0030 Nicotiana tabacum HOM05D007468 ORTHO05D009051 2.2e-11 73.9 231 31.6
Nitab4.5_0008750g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 4.9e-11 72.8 208 32.7
Gohir.D07G131600 Gossypium hirsutum HOM05D007468 ORTHO05D009051 6.3e-11 72.4 194 33.5
Gorai.001G142900 Gossypium raimondii HOM05D007468 ORTHO05D009051 6.3e-11 72.4 194 33.5
Gohir.A07G127300 Gossypium hirsutum HOM05D007468 ORTHO05D009051 3.1e-10 70.1 194 33.0
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 4.1e-10 69.7 189 32.8
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 4.1e-10 69.7 198 34.3
Lj1C20T8 Lonicera japonica HOM05D007468 ORTHO05D009051 5.4e-10 69.3 199 31.2
CANSAT25G0675 Cannabis sativa HOM05D007468 ORTHO05D009051 7.0e-10 68.9 183 36.6
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 7.0e-10 68.9 197 32.0
Lalb_Chr21g0309461 Lupinus albus HOM05D007468 ORTHO05D009051 9.2e-10 68.6 210 36.2
Peaxi162Scf00140g01310 Petunia axillaris HOM05D007468 ORTHO05D009051 1.2e-09 68.2 192 34.4
ClCG10G011220 Citrullus lanatus HOM05D007468 ORTHO05D009051 1.6e-09 67.8 119 42.0
Sc05g0000570 Simmondsia chinensis HOM05D007468 ORTHO05D009051 1.6e-09 67.8 185 39.5
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 2.7e-09 67.0 175 30.3
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 3.5e-09 66.6 191 30.9
Manes.01G225500 Manihot esculenta HOM05D007468 ORTHO05D009051 7.8e-09 65.5 117 41.0
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 1.0e-08 65.1 198 34.8
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 1.0e-08 65.1 211 28.0
Ca_09200_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 1.7e-08 64.3 212 33.0
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 1.7e-08 64.3 194 32.5
MELO3C017927.2 Cucumis melo HOM05D007468 ORTHO05D009051 1.7e-08 64.3 174 37.9
Psat3g020640 Pisum sativum HOM05D007468 ORTHO05D009051 3.8e-08 63.2 181 33.1
CsaV3_4G001100 Cucumis sativus L. HOM05D007468 ORTHO05D009051 6.6e-08 62.4 174 31.6
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 6.6e-08 62.4 118 42.4
Psat6g163440 Pisum sativum HOM05D007468 ORTHO05D009051 1.1e-07 61.6 163 35.6
TAR365G0390 Trochodendron aralioides HOM05D007468 ORTHO05D009051 1.1e-07 61.6 164 34.8
Psat5g096000 Pisum sativum HOM05D007468 ORTHO05D009051 1.5e-07 61.2 217 31.3
PGR044G1291 Punica granatum HOM05D007468 ORTHO05D009051 1.5e-07 61.2 207 32.9
Sopen06g035970 Solanum pennellii HOM05D007468 ORTHO05D009051 1.5e-07 61.2 218 28.0
Glyma.03G218100 Glycine max HOM05D007468 ORTHO05D009051 1.9e-07 60.8 171 35.1
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 2.5e-07 60.5 179 35.2
Glyma.19G214800 Glycine max HOM05D007468 ORTHO05D009051 2.5e-07 60.5 186 34.9
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 2.5e-07 60.5 195 33.3
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 3.3e-07 60.1 192 30.7
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 4.3e-07 59.7 179 34.6
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 4.3e-07 59.7 179 34.6
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 5.6e-07 59.3 107 45.8
Duzib133G0259 Durio zibethinus HOM05D007468 ORTHO05D009051 5.6e-07 59.3 194 30.4
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 7.3e-07 58.9 188 31.9
Rhsim13G0006300 Rhododendron simsii HOM05D007468 ORTHO05D009051 7.3e-07 58.9 254 30.3
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 9.5e-07 58.5 177 31.1
BcaB03g15797 Brassica carinata HOM05D010095 ORTHO05D012148 9.5e-07 58.5 135 37.0
Ca_10302_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 9.5e-07 58.5 127 37.8
Haze_05006 Corylus avellana HOM05D007468 ORTHO05D009051 2.1e-06 57.4 107 45.8
Thecc.01G309900 Theobroma cacao HOM05D007468 ORTHO05D009051 2.1e-06 57.4 195 29.2
VMungo0720G2271 Vigna mungo HOM05D007468 ORTHO05D009051 2.1e-06 57.4 212 32.1
Phvul.001G211600 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 2.8e-06 57.0 187 34.2
Glyma.02G014400 Glycine max HOM05D007468 ORTHO05D009051 3.6e-06 56.6 192 31.8
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 3.6e-06 56.6 191 31.4
TPR.G20290 Trifolium pratense HOM05D007468 ORTHO05D009051 3.6e-06 56.6 215 28.8
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 4.7e-06 56.2 207 30.9
FAN04G2054 Fragaria x ananassa HOM05D007468 ORTHO05D009051 6.1e-06 55.8 202 32.7
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 6.1e-06 55.8 171 33.3
AT4G02160 Arabidopsis thaliana HOM05D010095 ORTHO05D012148 8.0e-06 55.5 171 36.3


User provided reference genes

Program Settings