Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold334G49026 Striga asiatica HOM05D009630 ORTHO05D018137 1.2e-137 493.0 236 100.0
SGA_v2.0_scaffold137G35133 Striga asiatica HOM05D009630 ORTHO05D018137 1.6e-81 306.6 203 70.4
SGA_v2.0_scaffold229G43353 Striga asiatica HOM05D009630 ORTHO05D018137 2.1e-76 289.7 181 72.9
SGA_v2.0_scaffold238G43944 Striga asiatica HOM05D009630 ORTHO05D018137 1.7e-73 280.0 191 69.6
SGA_v2.0_scaffold36G14360 Striga asiatica HOM05D009630 ORTHO05D018137 3.5e-55 219.2 192 62.0
SGA_v2.0_scaffold62G21306 Striga asiatica HOM05D009630 ORTHO05D018137 4.4e-26 122.5 110 62.7
SGA_v2.0_scaffold29G12080 Striga asiatica HOM05D009630 ORTHO05D018137 1.2e-20 104.4 170 37.6
CANSAT11G0632 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-14 83.6 233 27.9
Atru.chr5.1622 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-14 82.4 223 28.7
CANSAT78G1435 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-13 80.9 238 25.2
Oeu019515.1 Olea europaea HOM05D000003 ORTHO05D000167 7.3e-13 78.6 132 36.4
CANSAT54G2709 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-12 77.4 225 26.7
CANSAT21G0988 Cannabis sativa HOM05D000003 ORTHO05D000004 3.6e-12 76.3 205 29.3
CANSAT78G0786 Cannabis sativa HOM05D000003 ORTHO05D000004 6.2e-12 75.5 242 25.6
CANSAT56G3747 Cannabis sativa HOM05D000003 ORTHO05D000167 8.1e-12 75.1 235 25.5
CANSAT21G1369 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-11 73.9 238 24.4
Atru.chr11.1423 Acer truncatum HOM05D000003 ORTHO05D000167 4.0e-11 72.8 220 28.6
Atru.chr9.643 Acer truncatum HOM05D000003 ORTHO05D000167 4.0e-11 72.8 203 26.1
CANSAT64G2222 Cannabis sativa HOM05D000003 ORTHO05D000004 6.8e-11 72.0 230 22.2
SGA_v2.0_scaffold486G52373 Striga asiatica HOM05D009630 ORTHO05D018137 1.2e-10 71.2 64 56.2
Atru.chr10.362 Acer truncatum HOM05D000003 ORTHO05D000167 1.5e-10 70.9 221 27.1
Atru.chr9.1321 Acer truncatum HOM05D000003 ORTHO05D000167 1.5e-10 70.9 201 29.9
CANSAT78G1893 Cannabis sativa HOM05D000003 ORTHO05D000167 2.0e-10 70.5 252 26.2
CANSAT01G2509 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-10 70.1 224 27.2
CANSAT64G1142 Cannabis sativa HOM05D000003 ORTHO05D000167 2.6e-10 70.1 203 27.1
Atru.chr4.2367 Acer truncatum HOM05D000003 ORTHO05D000167 5.8e-10 68.9 148 33.1
Atru.chr13.1818 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-09 67.8 213 28.2
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-09 67.8 215 25.1
CANSAT64G2879 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-09 67.4 243 23.5
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 1.7e-09 67.4 225 28.0
Atru.chr8.183 Acer truncatum HOM05D000003 ORTHO05D000167 2.2e-09 67.0 217 27.2
Atru.chr8.265 Acer truncatum HOM05D000003 ORTHO05D000167 2.2e-09 67.0 217 27.2
CANSAT01G2496 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-09 67.0 246 22.8
Atru.chr1.3159 Acer truncatum HOM05D000003 ORTHO05D000167 2.9e-09 66.6 203 28.6
CANSAT35G2037 Cannabis sativa HOM05D000003 ORTHO05D000167 2.9e-09 66.6 247 25.1
Atru.chr9.304 Acer truncatum HOM05D000003 ORTHO05D000167 3.7e-09 66.2 210 24.3
CANSAT35G1919 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-09 66.2 225 25.8
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 4.9e-09 65.9 202 26.7
CANSAT56G3043 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-09 65.9 142 29.6
CANSAT35G0981 Cannabis sativa HOM05D000003 ORTHO05D000167 6.4e-09 65.5 219 25.6
CANSAT64G1154 Cannabis sativa HOM05D000003 ORTHO05D000004 8.4e-09 65.1 239 22.2
CANSAT25G1542 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-08 64.7 145 31.7
Atru.chr6.748 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-08 64.3 239 26.8
CANSAT21G2476 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-08 64.3 124 33.9
Atru.chr1.3769 Acer truncatum HOM05D000003 ORTHO05D000167 1.9e-08 63.9 146 34.2
CANSAT80G2437 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-08 63.9 224 23.7
Atru.chr1.763 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-08 63.5 215 26.0
CANSAT56G0342 Cannabis sativa HOM05D000003 ORTHO05D000167 2.4e-08 63.5 239 22.2
CANSAT56G0050 Cannabis sativa HOM05D000031 ORTHO05D000030 3.2e-08 63.2 138 32.6
CANSAT80G2229 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-08 63.2 233 24.5
Dinv32432 Davidia involucrata HOM05D000003 ORTHO05D011454 4.1e-08 62.8 164 26.2
Atru.chr8.486 Acer truncatum HOM05D000003 ORTHO05D000004 5.4e-08 62.4 217 25.3
CANSAT11G0021 Cannabis sativa HOM05D000003 ORTHO05D000167 5.4e-08 62.4 208 24.5
Atru.chr4.1214 Acer truncatum HOM05D000003 ORTHO05D000167 7.1e-08 62.0 215 26.0
Atru.chr11.1957 Acer truncatum HOM05D000003 ORTHO05D000167 9.2e-08 61.6 216 23.6
Atru.chr2.2868 Acer truncatum HOM05D000003 ORTHO05D000004 9.2e-08 61.6 219 26.5
Atru.chr8.695 Acer truncatum HOM05D000003 ORTHO05D000167 9.2e-08 61.6 142 31.7
EL10Ac4g10128 Beta vulgaris HOM05D004808 ORTHO05D005279 9.2e-08 61.6 144 30.6
CANSAT64G2141 Cannabis sativa HOM05D000003 ORTHO05D000004 9.2e-08 61.6 243 23.9
FAN14G5071 Fragaria x ananassa HOM05D008833 ORTHO05D010662 9.2e-08 61.6 179 27.4
Atru.chr2.2049 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-07 60.8 218 25.2
CANSAT35G0664 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-07 60.8 153 33.3
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.6e-07 60.8 224 24.1
Atru.chr9.954 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-07 60.5 203 25.6
Atru.ctg24.6 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-07 60.5 216 26.9
EL10Ac6g13097 Beta vulgaris HOM05D000003 ORTHO05D000167 2.1e-07 60.5 150 29.3
CANSAT80G1228 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-07 60.5 142 29.6
Atru.chr12.1232 Acer truncatum HOM05D000003 ORTHO05D000167 2.7e-07 60.1 215 24.7
RcHm_v2.0_Chr4g0398671 Rosa chinensis HOM05D000003 ORTHO05D010102 2.7e-07 60.1 221 24.0
CANSAT35G0498 Cannabis sativa HOM05D000003 ORTHO05D000004 3.5e-07 59.7 148 29.7
CANSAT56G0621 Cannabis sativa HOM05D000003 ORTHO05D000167 3.5e-07 59.7 138 29.0
QL10p011272 Quercus lobata HOM05D000003 ORTHO05D000167 3.5e-07 59.7 211 24.6
Atru.chr1.2640 Acer truncatum HOM05D000003 ORTHO05D000126 4.6e-07 59.3 224 25.4
Atru.chr10.1536 Acer truncatum HOM05D000003 ORTHO05D000167 4.6e-07 59.3 230 26.1
CANSAT21G0879 Cannabis sativa HOM05D000003 ORTHO05D000004 4.6e-07 59.3 272 23.5
CANSAT64G0231 Cannabis sativa HOM05D000003 ORTHO05D000167 4.6e-07 59.3 206 28.2
Atru.chr2.2201 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-07 58.9 217 25.3
Dinv08495 Davidia involucrata HOM05D000003 ORTHO05D000167 6.0e-07 58.9 134 29.9
RcHm_v2.0_Chr2g0109541 Rosa chinensis HOM05D009322 ORTHO05D010713 6.0e-07 58.9 131 32.8
Atru.chr11.542 Acer truncatum HOM05D000003 ORTHO05D000167 1.0e-06 58.2 215 24.2
Atru.chr13.2346 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 58.2 221 26.7
Atru.chr2.677 Acer truncatum HOM05D000003 ORTHO05D000167 1.0e-06 58.2 167 26.9
Atru.chr7.536 Acer truncatum HOM05D000003 ORTHO05D000167 1.0e-06 58.2 141 31.9
Dinv37210 Davidia involucrata HOM05D000003 ORTHO05D000167 1.0e-06 58.2 134 26.9
TAR199G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.0e-06 58.2 128 32.8
Atru.chr9.177 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-06 57.8 140 27.1
CANSAT54G2929 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-06 57.8 138 32.6
CANSAT80G0722 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-06 57.8 219 22.8
Atru.chr10.544 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-06 57.4 215 26.5
Atru.chr9.1193 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-06 57.4 145 30.3
CANSAT01G2972 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-06 57.4 158 31.0
Atru.chr11.1421 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 57.0 130 31.5
Atru.chr5.2450 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 57.0 145 30.3
EL10Ac2g03433 Beta vulgaris HOM05D000003 ORTHO05D000167 2.3e-06 57.0 112 32.1
CANSAT64G1526 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-06 57.0 145 31.7
CANSAT78G1659 Cannabis sativa HOM05D000003 ORTHO05D000167 2.3e-06 57.0 227 23.3
CANSAT80G1791 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-06 57.0 147 27.9
CANSAT25G1682 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-06 56.6 128 33.6
CANSAT64G2594 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-06 56.6 125 29.6
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-06 56.2 233 26.2
Atru.chr1.3779 Acer truncatum HOM05D000003 ORTHO05D000167 5.1e-06 55.8 217 24.9
Atru.chr9.663 Acer truncatum HOM05D000003 ORTHO05D000167 5.1e-06 55.8 164 27.4
EL10Ac2g04418 Beta vulgaris HOM05D000003 ORTHO05D000004 5.1e-06 55.8 212 25.5
Atru.chr1.1791 Acer truncatum HOM05D000003 ORTHO05D000167 6.6e-06 55.5 161 28.6
Atru.chr12.2338 Acer truncatum HOM05D000003 ORTHO05D000167 6.6e-06 55.5 128 30.5
Atru.chr5.2789 Acer truncatum HOM05D000003 ORTHO05D000167 6.6e-06 55.5 139 30.9
FAN25G0424 Fragaria x ananassa HOM05D008833 ORTHO05D010662 6.6e-06 55.5 145 28.3


User provided reference genes

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