Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold333G49009 Striga asiatica HOM05D000001 ORTHO05D004986 1.2e-203 713.0 364 100.0
Migut.M00942 Erythranthe guttata HOM05D000001 ORTHO05D004986 3.8e-93 345.9 220 81.4
MSTRG.16212 Avicennia marina HOM05D000001 ORTHO05D004986 1.0e-90 337.8 220 76.4
SalBow8G4638 Salvia bowleyana HOM05D000001 ORTHO05D004986 5.1e-90 335.5 234 72.6
SalBow8G5585 Salvia bowleyana HOM05D000001 ORTHO05D004986 6.7e-90 335.1 234 72.2
Oeu040958.1 Olea europaea HOM05D000001 ORTHO05D004986 1.3e-88 330.9 224 75.0
CAN.G638.28 Capsicum annuum HOM05D000001 ORTHO05D004986 2.8e-88 329.7 218 75.7
PGSC0003DMG400013419 Solanum tuberosum HOM05D000001 ORTHO05D004986 2.4e-87 326.6 218 76.1
Solyc03g005800.4 Solanum lycopersicum HOM05D000001 ORTHO05D004986 3.1e-87 326.2 218 76.6
Oeu052385.1 Olea europaea HOM05D000001 ORTHO05D004986 2.0e-86 323.6 215 73.0
Sopen03g001840 Solanum pennellii HOM05D000001 ORTHO05D004986 2.0e-86 323.6 218 75.2
Nitab4.5_0020993g0010 Nicotiana tabacum HOM05D000001 ORTHO05D004986 3.4e-86 322.8 215 75.3
Manes.17G066600 Manihot esculenta HOM05D000001 ORTHO05D004986 1.3e-85 320.9 233 70.0
Dinv05246 Davidia involucrata HOM05D000001 ORTHO05D004986 3.8e-85 319.3 215 75.3
Dinv32284 Davidia involucrata HOM05D000001 ORTHO05D009595 6.5e-85 318.5 260 65.4
unitig_32.g11435 Utricularia gibba HOM05D000001 ORTHO05D004986 1.9e-84 317.0 219 71.7
Cpa.g.sc116.50 Carica papaya HOM05D000001 ORTHO05D004986 4.2e-84 315.8 237 67.1
COL.COLO4_07499 Corchorus olitorius HOM05D000001 ORTHO05D004986 7.1e-84 315.1 218 74.8
Atru.chr10.1353 Acer truncatum HOM05D000001 ORTHO05D004986 7.9e-83 311.6 212 72.6
MD05G1289800 Malus domestica HOM05D000001 ORTHO05D004986 1.8e-82 310.5 215 74.0
GSVIVG01021402001 Vitis vinifera HOM05D000001 ORTHO05D004986 1.8e-82 310.5 228 68.4
Ciclev10016572m.g Citrus clementina HOM05D000001 ORTHO05D004986 2.3e-82 310.1 216 74.1
vmacro17922 Vaccinium macrocarpon HOM05D000001 ORTHO05D004986 2.3e-82 310.1 216 72.2
HanXRQChr11g0348471 Helianthus annuus HOM05D000001 ORTHO05D004986 3.9e-82 309.3 211 73.9
vmacro13003 Vaccinium macrocarpon HOM05D000001 ORTHO05D004986 3.9e-82 309.3 216 71.8
Peaxi162Scf00778g00312 Petunia axillaris HOM05D000001 ORTHO05D004986 6.7e-82 308.5 255 64.3
Cc06_g17960 Coffea canephora HOM05D000001 ORTHO05D004986 1.1e-81 307.8 219 73.1
MD10G1265600 Malus domestica HOM05D000001 ORTHO05D004986 1.5e-81 307.4 221 71.9
Gohir.A10G038800 Gossypium hirsutum HOM05D000001 ORTHO05D004986 2.5e-81 306.6 217 73.3
TPR.G8082 Trifolium pratense HOM05D000001 ORTHO05D004986 2.5e-81 306.6 228 68.4
Prupe.4G075900 Prunus persica HOM05D000001 ORTHO05D004986 3.3e-81 306.2 219 71.7
Gorai.011G041800 Gossypium raimondii HOM05D000001 ORTHO05D004986 4.3e-81 305.8 217 72.8
Ah.14g088450 Amaranthus hybridus HOM05D000001 ORTHO05D004986 5.7e-81 305.4 212 72.2
TWI09G1546 Tripterygium wilfordii HOM05D000001 ORTHO05D004986 7.4e-81 305.1 236 66.5
Gohir.D10G039700 Gossypium hirsutum HOM05D000001 ORTHO05D004986 9.7e-81 304.7 217 72.4
HanXRQChr09g0248611 Helianthus annuus HOM05D000001 ORTHO05D004986 9.7e-81 304.7 215 71.2
Lsat_1_v5_gn_0_21141 Lactuca sativa HOM05D002527 ORTHO05D004986 9.7e-81 304.7 216 72.2
Lalb_Chr22g0354111 Lupinus albus HOM05D000001 ORTHO05D004986 1.3e-80 304.3 234 67.9
Aqoxy3G02543 Aquilegia oxysepala HOM05D000001 ORTHO05D004986 1.6e-80 303.9 219 69.4
FAN16G0100 Fragaria x ananassa HOM05D000001 ORTHO05D004986 2.8e-80 303.1 217 69.6
Lj2g0023818 Lotus japonicus HOM05D000001 ORTHO05D004986 2.8e-80 303.1 233 67.0
FvH4_3g06150 Fragaria vesca HOM05D000001 ORTHO05D004986 3.7e-80 302.8 217 69.1
Hma1.2p1_0835F.1_g225806 Hydrangea macrophylla HOM05D000001 ORTHO05D004986 3.7e-80 302.8 216 69.9
FAN21G2879 Fragaria x ananassa HOM05D000001 ORTHO05D004986 4.8e-80 302.4 217 69.6
TPR.G37137 Trifolium pratense HOM05D000001 ORTHO05D004986 4.8e-80 302.4 203 73.9
DCAR_003945 Daucus carota HOM05D000001 ORTHO05D004986 6.3e-80 302.0 220 68.2
QL12p004541 Quercus lobata HOM05D000001 ORTHO05D004986 8.2e-80 301.6 225 68.0
Gohir.A09G078100 Gossypium hirsutum HOM05D000001 ORTHO05D004986 1.1e-79 301.2 217 71.4
Gorai.006G093500 Gossypium raimondii HOM05D000001 ORTHO05D004986 1.1e-79 301.2 217 71.9
VMungo1215G3010 Vigna mungo HOM05D000001 ORTHO05D004986 1.1e-79 301.2 212 69.3
FAN11G3616 Fragaria x ananassa HOM05D000001 ORTHO05D004986 1.4e-79 300.8 214 69.6
Medtr2g103770 Medicago truncatula HOM05D000001 ORTHO05D004986 1.4e-79 300.8 203 72.4
TWI75G1193 Tripterygium wilfordii HOM05D000001 ORTHO05D004986 1.4e-79 300.8 233 67.0
Glyma.06G034800 Glycine max HOM05D000001 ORTHO05D004986 3.1e-79 299.7 212 70.8
Glyma.09G206400 Glycine max HOM05D000001 ORTHO05D004986 3.1e-79 299.7 206 71.8
CsaV3_3G001520 Cucumis sativus L. HOM05D000001 ORTHO05D004986 4.1e-79 299.3 221 69.7
Cfa000981 Carpinus fangiana HOM05D000001 ORTHO05D004986 5.3e-79 298.9 234 67.1
AT4G18230 Arabidopsis thaliana HOM05D000001 ORTHO05D004986 6.9e-79 298.5 214 69.6
CiPaw.10G094900 Carya illinoinensis HOM05D000001 ORTHO05D004986 6.9e-79 298.5 218 69.3
Phvul.002G139300 Phaseolus vulgaris HOM05D000001 ORTHO05D004986 6.9e-79 298.5 212 68.9
PGR042G2866 Punica granatum HOM05D000001 ORTHO05D004986 9.0e-79 298.1 221 68.3
AL7G36180 Arabidopsis lyrata HOM05D000001 ORTHO05D004986 1.2e-78 297.7 214 68.7
QL08p032320 Quercus lobata HOM05D000001 ORTHO05D004986 1.5e-78 297.4 228 65.4
A03p51120 Brassica napus HOM05D000001 ORTHO05D004986 2.0e-78 297.0 213 70.0
Carub.0007s2310 Capsella rubella HOM05D000001 ORTHO05D004986 2.6e-78 296.6 232 65.5
CARHR224980 Cardamine hirsuta HOM05D000001 ORTHO05D004986 2.6e-78 296.6 214 68.7
Gohir.D09G078500 Gossypium hirsutum HOM05D000001 ORTHO05D004986 2.6e-78 296.6 217 71.9
PSO210G1957 Papaver somniferum HOM05D000001 ORTHO05D004986 3.4e-78 296.2 245 63.3
PSO210G2371 Papaver somniferum HOM05D000001 ORTHO05D004986 3.4e-78 296.2 229 67.2
TAR624G0170 Trochodendron aralioides HOM05D000001 ORTHO05D004986 3.4e-78 296.2 217 69.1
THA.LOC104807170 Tarenaya hassleriana HOM05D000001 ORTHO05D004986 5.9e-78 295.4 216 67.6
BraA03t14197Z Brassica rapa HOM05D000001 ORTHO05D004986 7.7e-78 295.0 213 69.0
THA.LOC104812842 Tarenaya hassleriana HOM05D000001 ORTHO05D004986 1.3e-77 294.3 224 65.2
Nitab4.5_0002814g0060 Nicotiana tabacum HOM05D000001 ORTHO05D004986 2.2e-77 293.5 213 70.4
RcHm_v2.0_Chr5g0013201 Rosa chinensis HOM05D000001 ORTHO05D004986 2.2e-77 293.5 217 69.6
Glyma.01G016400 Glycine max HOM05D000001 ORTHO05D004986 2.9e-77 293.1 233 64.8
Carub.0004s0792 Capsella rubella HOM05D000001 ORTHO05D004986 3.8e-77 292.7 227 64.8
Rhsim01G0128700 Rhododendron simsii HOM05D000001 ORTHO05D004986 3.8e-77 292.7 237 62.9
DCAR_007902 Daucus carota HOM05D000001 ORTHO05D004986 6.5e-77 292.0 208 72.1
Potri.001G352000 Populus trichocarpa HOM05D000001 ORTHO05D004986 8.5e-77 291.6 227 67.0
FAN12G0199 Fragaria x ananassa HOM05D000001 ORTHO05D004986 1.4e-76 290.8 200 71.5
TAR626G1778 Trochodendron aralioides HOM05D000001 ORTHO05D004986 1.4e-76 290.8 215 68.4
BcaNung00022 Brassica carinata HOM05D000001 ORTHO05D004986 1.9e-76 290.4 206 70.9
Sp7g15880 Schrenkiella parvula HOM05D000001 ORTHO05D004986 1.9e-76 290.4 214 68.2
Duzib235G0686 Durio zibethinus HOM05D000001 ORTHO05D004986 2.5e-76 290.0 208 71.2
PSO541G0137 Papaver somniferum HOM05D000001 ORTHO05D004986 2.5e-76 290.0 218 69.3
C07p49550 Brassica napus HOM05D000001 ORTHO05D004986 3.2e-76 289.7 216 66.7
Eucgr.E02385 Eucalyptus grandis HOM05D000001 ORTHO05D004986 3.2e-76 289.7 219 67.1
Thhalv10026141m.g Eutrema salsugineum HOM05D000001 ORTHO05D004986 3.2e-76 289.7 214 67.3
BolC7t45459H Brassica oleracea HOM05D000001 ORTHO05D004986 4.2e-76 289.3 214 68.2
PSO675G0445 Papaver somniferum HOM05D000001 ORTHO05D004986 4.2e-76 289.3 218 68.3
Aa31LG6G920 Aethionema arabicum HOM05D000001 ORTHO05D004986 5.5e-76 288.9 214 67.8
EL10Ac7g17433 Beta vulgaris HOM05D000001 ORTHO05D004986 9.4e-76 288.1 211 69.7
Haze_05536 Corylus avellana HOM05D000001 ORTHO05D004986 9.4e-76 288.1 256 60.5
FAN12G3749 Fragaria x ananassa HOM05D000001 ORTHO05D004986 9.4e-76 288.1 230 64.3
Sabra16G0231400 Salix brachista HOM05D000001 ORTHO05D004986 9.4e-76 288.1 226 65.0
BcaNung05675 Brassica carinata HOM05D000001 ORTHO05D004986 1.2e-75 287.7 214 68.2
CDE04G3124 Ceratophyllum demersum HOM05D000001 ORTHO05D004986 1.6e-75 287.3 216 69.0
ECA232G3011 Erigeron canadensis HOM05D000001 ORTHO05D000003 1.6e-75 287.3 210 70.0
EL10Ac8g19918 Beta vulgaris HOM05D000001 ORTHO05D004986 3.6e-75 286.2 207 70.5
Sed0013949 Sechium edule HOM05D000001 ORTHO05D004986 3.6e-75 286.2 221 67.0
Lj1A1183G70 Lonicera japonica HOM05D000001 ORTHO05D004986 4.6e-75 285.8 221 69.2
BolC1t01175H Brassica oleracea HOM05D000001 ORTHO05D004986 7.9e-75 285.0 223 65.5
SGA_v2.0_scaffold44G16546 Striga asiatica HOM05D000001 ORTHO05D004986 1.5e-73 280.8 246 65.9
BraA01t00965Z Brassica rapa HOM05D000001 ORTHO05D004986 2.0e-73 280.4 212 66.0
Duzib192G0828 Durio zibethinus HOM05D000001 ORTHO05D004986 2.0e-73 280.4 273 58.2
HPP92_001019 Vanilla planifolia HOM05D000001 ORTHO05D004986 5.7e-73 278.9 217 63.6
BcaC09g51544 Brassica carinata HOM05D000001 ORTHO05D004986 9.7e-73 278.1 223 63.2
C01p12010 Brassica napus HOM05D000001 ORTHO05D004986 9.7e-73 278.1 223 63.2
Lj2g0013388 Lotus japonicus HOM05D000001 ORTHO05D004986 1.3e-72 277.7 234 61.5
A01p10190 Brassica napus HOM05D000001 ORTHO05D004986 2.8e-72 276.6 199 69.8
PSO782G3580 Papaver somniferum HOM05D000001 ORTHO05D004986 3.7e-72 276.2 223 65.5
Zm00001eb138940 Zea mays HOM05D000001 ORTHO05D004986 1.2e-70 271.2 225 60.9
ATR0598G080 Amborella trichopoda HOM05D000001 ORTHO05D004986 1.3e-69 267.7 216 62.5
Nitab4.5_0000982g0180 Nicotiana tabacum HOM05D000001 ORTHO05D004986 3.2e-68 263.1 218 61.9
Actinidia19506 Actinidia chinensis HOM05D000001 ORTHO05D004986 4.2e-68 262.7 166 78.9
Hund08913 Selenicereus undatus HOM05D000001 ORTHO05D004986 7.2e-68 261.9 334 45.8
arahy.Tifrunner.gnm1.ann1.KEGW9P Arachis hypogaea HOM05D000001 ORTHO05D004986 2.7e-67 260.0 233 58.8
arahy.Tifrunner.gnm1.ann1.RU8LWF Arachis hypogaea HOM05D000001 ORTHO05D004986 2.7e-67 260.0 233 58.8
Sc05g0008440 Simmondsia chinensis HOM05D000001 ORTHO05D004986 2.3e-66 256.9 227 62.1
Zm00001eb405440 Zea mays HOM05D000001 ORTHO05D004986 2.3e-66 256.9 212 60.8
Lalb_Chr22g0354091 Lupinus albus HOM05D000001 ORTHO05D004986 2.0e-65 253.8 169 75.1
Ca_08155_v3 Cicer arietinum L. HOM05D000001 ORTHO05D004986 1.3e-64 251.1 209 63.2
Thecc.06G155100 Theobroma cacao HOM05D000001 ORTHO05D004986 2.4e-63 246.9 216 63.4
Peaxi162Scf00242g00511 Petunia axillaris HOM05D000001 ORTHO05D004986 1.3e-61 241.1 214 61.2
FAN25G0129 Fragaria x ananassa HOM05D000001 ORTHO05D004986 8.5e-61 238.4 158 73.4
Hund23532 Selenicereus undatus HOM05D000001 ORTHO05D004986 3.2e-60 236.5 226 59.7
Atru.chr10.1362 Acer truncatum HOM05D000001 ORTHO05D004986 7.2e-60 235.3 208 59.1
FAN07G0177 Fragaria x ananassa HOM05D000001 ORTHO05D009595 8.0e-59 231.9 202 60.9
AagrBONN_evm.TU.Sc2ySwM_344.5328 Anthoceros agrestis HOM05D000001 ORTHO05D004986 1.4e-58 231.1 232 52.2
Pp3c16_16970 Physcomitrium patens HOM05D000001 ORTHO05D004986 6.7e-58 228.8 227 52.4
Mapoly0083s0035 Marchantia polymorpha HOM05D000001 ORTHO05D004986 9.7e-57 224.9 223 50.7
SMO111G0079 Selaginella moellendorffii HOM05D000001 ORTHO05D004986 1.4e-55 221.1 172 58.7
Eucgr.G01712 Eucalyptus grandis HOM05D000001 ORTHO05D004986 2.0e-54 217.2 173 64.2
CAN.G157.25 Capsicum annuum HOM05D000001 ORTHO05D004986 3.5e-54 216.5 189 62.4
Psat2g137640 Pisum sativum HOM05D000001 ORTHO05D004986 2.9e-53 213.4 125 82.4
Nitab4.5_0004171g0030 Nicotiana tabacum HOM05D000001 ORTHO05D004986 1.1e-52 211.5 116 85.3
FvH4_4g17080 Fragaria vesca HOM05D000001 ORTHO05D004986 1.9e-52 210.7 163 65.6
PSO675G6216 Papaver somniferum HOM05D000001 ORTHO05D004986 1.9e-52 210.7 144 77.1
ClCG10G001450 Citrullus lanatus HOM05D000001 ORTHO05D004986 1.2e-51 208.0 121 84.3
CBR_g20308 Chara braunii HOM05D000001 ORTHO05D004986 1.6e-51 207.6 245 44.5
AUR62012587 Chenopodium quinoa HOM05D000001 ORTHO05D004986 3.0e-50 203.4 156 65.4
SEGI_41604 Sequoiadendron giganteum HOM05D000001 ORTHO05D004986 8.3e-48 195.3 119 74.8
Cre16.g669950 Chlamydomonas reinhardtii HOM05D000001 ORTHO05D004986 5.0e-45 186.0 212 49.5
BcaNung05673 Brassica carinata HOM05D000001 ORTHO05D004986 8.8e-42 175.3 103 79.6
Nn6g33671 Nelumbo nucifera HOM05D000001 ORTHO05D004986 2.8e-40 170.2 142 63.4
Potri.002G170700 Populus trichocarpa HOM05D000001 ORTHO05D004986 6.6e-37 159.1 188 52.7
MELO3C013839.2 Cucumis melo HOM05D000001 ORTHO05D004986 8.6e-37 158.7 303 36.6
MCO07G420 Micromonas commoda HOM05D000001 ORTHO05D004986 5.2e-34 149.4 188 42.0
FAN22G1785 Fragaria x ananassa HOM05D000001 ORTHO05D009595 1.7e-29 134.4 172 45.3
FAN17G2209 Fragaria x ananassa HOM05D000001 ORTHO05D004986 3.9e-29 133.3 117 59.0
RcHm_v2.0_Chr7g0219921 Rosa chinensis HOM05D005182 ORTHO05D006631 1.5e-28 131.3 81 76.5
MD05G1092100 Malus domestica HOM05D000001 ORTHO05D004986 9.8e-25 118.6 75 78.7
CDE04G2877 Ceratophyllum demersum HOM05D000001 ORTHO05D004986 1.3e-24 118.2 135 53.3
Atru.chr10.1359 Acer truncatum HOM05D000001 ORTHO05D004986 2.2e-24 117.5 86 68.6
Sabra01G0122300 Salix brachista HOM05D000001 ORTHO05D004986 2.0e-22 110.9 67 74.6
CAN.G45.3 Capsicum annuum HOM05D000001 ORTHO05D004986 4.6e-22 109.8 67 82.1
MD10G1065300 Malus domestica HOM05D000001 ORTHO05D004986 3.6e-19 100.1 162 38.9
Ciclev10013445m.g Citrus clementina HOM05D000001 ORTHO05D004986 8.1e-19 99.0 115 49.6
A08p13600 Brassica napus HOM05D000001 ORTHO05D004986 1.8e-18 97.8 80 62.5
Glyma.01G062700 Glycine max HOM05D000001 ORTHO05D004986 3.1e-18 97.1 103 47.6
Os03g0423200 Oryza sativa ssp. japonica HOM05D000001 ORTHO05D004986 3.1e-18 97.1 58 79.3
Glyma.17G172800 Glycine max HOM05D000001 ORTHO05D004986 5.8e-17 92.8 103 45.6
arahy.Tifrunner.gnm1.ann1.T5CDEI Arachis hypogaea HOM05D000001 ORTHO05D005257 2.4e-15 87.4 173 33.5
Cfa022018 Carpinus fangiana HOM05D000001 ORTHO05D004986 9.2e-15 85.5 242 31.0
arahy.Tifrunner.gnm1.ann1.WQ0UR5 Arachis hypogaea HOM05D000001 ORTHO05D083426 1.2e-14 85.1 143 39.2
SEGI_40748 Sequoiadendron giganteum HOM05D000001 ORTHO05D004986 2.7e-14 84.0 112 46.4
ClCG10G001440 Citrullus lanatus HOM05D000001 ORTHO05D004986 7.8e-14 82.4 98 44.9
Glyma.08G299100 Glycine max HOM05D000001 ORTHO05D002756 3.4e-09 67.0 177 31.1
Medtr5g029710 Medicago truncatula HOM05D000001 ORTHO05D004986 5.8e-09 66.2 78 41.0
arahy.Tifrunner.gnm1.ann1.9TS7X7 Arachis hypogaea HOM05D000025 ORTHO05D000040 7.6e-09 65.9 46 65.2
BolC8t48554H Brassica oleracea HOM05D000001 ORTHO05D004986 1.7e-08 64.7 52 65.4
Nitab4.5_0000001g0510 Nicotiana tabacum HOM05D000001 ORTHO05D004986 2.1e-06 57.8 34 70.6
arahy.Tifrunner.gnm1.ann1.A1RXRR Arachis hypogaea HOM05D000001 ORTHO05D004986 6.0e-06 56.2 41 61.0


User provided reference genes

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