Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold333G49006 Striga asiatica HOM05D004223 ORTHO05D004792 3.5e-183 644.8 326 100.0
SGA_v2.0_scaffold1G00153 Striga asiatica HOM05D004223 ORTHO05D004792 9.5e-112 407.5 318 69.8
Migut.M00929 Erythranthe guttata HOM05D004223 ORTHO05D004792 1.1e-83 314.3 354 53.7
SalBow8G4695 Salvia bowleyana HOM05D004223 ORTHO05D004792 5.1e-81 305.4 392 46.7
SalBow8G5598 Salvia bowleyana HOM05D004223 ORTHO05D004792 5.1e-81 305.4 392 46.7
Migut.H01375 Erythranthe guttata HOM05D004223 ORTHO05D004792 8.7e-81 304.7 363 51.5
Actinidia19511 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.2e-77 294.3 359 47.9
Oeu019944.1 Olea europaea HOM05D004223 ORTHO05D004792 3.4e-77 292.7 362 52.5
Solyc02g070860.4 Solanum lycopersicum HOM05D004223 ORTHO05D004792 4.4e-77 292.4 354 49.4
Sopen02g019940 Solanum pennellii HOM05D004223 ORTHO05D004792 4.4e-77 292.4 354 49.7
Dinv32277 Davidia involucrata HOM05D004223 ORTHO05D004792 7.1e-75 285.0 355 48.7
CAN.G257.3 Capsicum annuum HOM05D004223 ORTHO05D004792 9.3e-75 284.6 354 48.6
Nitab4.5_0001655g0250 Nicotiana tabacum HOM05D004223 ORTHO05D004792 1.5e-72 277.3 418 44.5
MSTRG.7472 Avicennia marina HOM05D004223 ORTHO05D004792 2.5e-72 276.6 260 58.8
DCAR_027947 Daucus carota HOM05D004223 ORTHO05D004792 2.6e-69 266.5 359 46.8
Actinidia07682 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.7e-68 263.8 357 45.9
Dinv30715 Davidia involucrata HOM05D004223 ORTHO05D004792 5.4e-67 258.8 254 56.3
GSVIVG01021418001 Vitis vinifera HOM05D004223 ORTHO05D004792 1.2e-66 257.7 356 46.3
Nn3g20665 Nelumbo nucifera HOM05D004223 ORTHO05D004792 2.7e-66 256.5 352 46.3
Cc09_g08890 Coffea canephora HOM05D004223 ORTHO05D004792 1.3e-65 254.2 352 44.6
HanXRQChr04g0118281 Helianthus annuus HOM05D004223 ORTHO05D004792 4.3e-64 249.2 345 46.4
Aqoxy1G01765 Aquilegia oxysepala HOM05D004223 ORTHO05D004792 1.3e-63 247.7 347 44.1
Duzib235G1300 Durio zibethinus HOM05D004223 ORTHO05D004792 2.1e-63 246.9 361 45.4
QL05p059118 Quercus lobata HOM05D004223 ORTHO05D004792 2.1e-63 246.9 357 45.4
PGR042G0116 Punica granatum HOM05D004223 ORTHO05D004792 1.1e-62 244.6 357 43.4
RcHm_v2.0_Chr5g0013511 Rosa chinensis HOM05D004223 ORTHO05D004792 1.4e-62 244.2 361 45.7
Prupe.4G077600 Prunus persica HOM05D004223 ORTHO05D004792 2.4e-62 243.4 361 44.6
MD10G1264700 Malus domestica HOM05D004223 ORTHO05D004792 4.0e-62 242.7 361 44.6
FvH4_3g05960 Fragaria vesca HOM05D004223 ORTHO05D004792 9.0e-62 241.5 361 44.9
CANSAT35G1433 Cannabis sativa HOM05D004223 ORTHO05D004792 1.2e-61 241.1 357 41.5
Thecc.06G153700 Theobroma cacao HOM05D004223 ORTHO05D004792 1.2e-61 241.1 352 44.9
Rhsim02G0155900 Rhododendron simsii HOM05D004223 ORTHO05D004792 2.6e-61 240.0 261 51.0
MD05G1287300 Malus domestica HOM05D004223 ORTHO05D004792 3.4e-61 239.6 361 43.2
TWI59G0075 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 8.4e-60 235.0 363 41.6
TWI53G0125 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 2.4e-59 233.4 359 42.9
Nitab4.5_0001040g0160 Nicotiana tabacum HOM05D004223 ORTHO05D004792 3.2e-59 233.0 366 43.4
ECA236G2733 Erigeron canadensis HOM05D004223 ORTHO05D004792 5.5e-59 232.3 349 43.6
Gohir.A10G039200 Gossypium hirsutum HOM05D004223 ORTHO05D004792 1.6e-58 230.7 347 43.5
EL10Ac8g19745 Beta vulgaris HOM05D004223 ORTHO05D004792 2.1e-58 230.3 368 42.4
Gohir.D10G040000 Gossypium hirsutum HOM05D004223 ORTHO05D004792 2.7e-58 229.9 347 43.5
Gorai.011G042100 Gossypium raimondii HOM05D004223 ORTHO05D004792 2.7e-58 229.9 347 43.5
Cfa023352 Carpinus fangiana HOM05D004223 ORTHO05D004792 6.0e-58 228.8 347 42.1
arahy.Tifrunner.gnm1.ann1.EM1NUG Arachis hypogaea HOM05D004223 ORTHO05D004792 1.0e-57 228.0 350 43.4
Lsat_1_v5_gn_7_32901 Lactuca sativa HOM05D004223 ORTHO05D004792 1.0e-57 228.0 342 43.9
Ciclev10015725m.g Citrus clementina HOM05D004223 ORTHO05D004792 1.3e-57 227.6 366 43.4
Manes.17G067700 Manihot esculenta HOM05D004223 ORTHO05D004792 1.8e-57 227.3 360 42.2
Sed0009895 Sechium edule HOM05D004223 ORTHO05D004792 5.1e-57 225.7 346 43.4
arahy.Tifrunner.gnm1.ann1.KB83YE Arachis hypogaea HOM05D004223 ORTHO05D004792 1.1e-56 224.6 349 43.0
Lsat_1_v5_gn_7_7501 Lactuca sativa HOM05D004223 ORTHO05D004792 2.5e-56 223.4 347 43.8
Lalb_Chr12g0208891 Lupinus albus HOM05D004223 ORTHO05D004792 2.5e-56 223.4 346 41.6
Glyma.08G084000 Glycine max HOM05D004223 ORTHO05D004792 9.6e-56 221.5 348 42.0
Duzib133G0675 Durio zibethinus HOM05D004223 ORTHO05D004792 2.1e-55 220.3 344 38.7
Ciclev10031935m.g Citrus clementina HOM05D004223 ORTHO05D004792 6.2e-55 218.8 343 40.5
PSO675G0042 Papaver somniferum HOM05D004223 ORTHO05D004792 8.2e-55 218.4 354 40.7
Phvul.002G194500 Phaseolus vulgaris HOM05D004223 ORTHO05D004792 1.1e-54 218.0 353 41.6
Potri.005G203600 Populus trichocarpa HOM05D004223 ORTHO05D004792 1.1e-54 218.0 347 40.9
Glyma.05G129300 Glycine max HOM05D004223 ORTHO05D004792 1.4e-54 217.6 346 41.6
CiPaw.10G093300 Carya illinoinensis HOM05D004223 ORTHO05D004792 1.8e-54 217.2 356 42.7
Lj4g0000090 Lotus japonicus HOM05D004223 ORTHO05D004792 2.4e-54 216.9 343 42.3
PSO541G2658 Papaver somniferum HOM05D004223 ORTHO05D004792 3.1e-54 216.5 354 40.4
VMungo0251G1974 Vigna mungo HOM05D004223 ORTHO05D004792 5.3e-54 215.7 260 49.6
QL08p044806 Quercus lobata HOM05D004223 ORTHO05D004792 6.9e-54 215.3 287 45.3
unitig_92.g28154 Utricularia gibba HOM05D004223 ORTHO05D004792 9.0e-54 214.9 353 42.2
Sc05g0006430 Simmondsia chinensis HOM05D004223 ORTHO05D004792 1.5e-53 214.2 363 40.5
ATR0585G108 Amborella trichopoda HOM05D004223 ORTHO05D004792 2.0e-53 213.8 362 38.4
Gohir.A07G080900 Gossypium hirsutum HOM05D004223 ORTHO05D004792 3.4e-53 213.0 350 37.1
Gorai.001G092500 Gossypium raimondii HOM05D004223 ORTHO05D004792 4.5e-53 212.6 351 37.3
Ca_06273_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 7.6e-53 211.8 354 38.1
Atru.chr6.2065 Acer truncatum HOM05D004223 ORTHO05D004792 1.3e-52 211.1 262 46.2
Peaxi162Scf00214g01114 Petunia axillaris HOM05D004223 ORTHO05D004792 2.9e-52 209.9 260 48.5
MELO3C002724.2 Cucumis melo HOM05D004223 ORTHO05D004792 6.5e-52 208.8 344 40.4
Zm00001eb153380 Zea mays HOM05D004223 ORTHO05D004792 1.9e-51 207.2 359 37.9
Potri.002G058500 Populus trichocarpa HOM05D004223 ORTHO05D004792 1.2e-50 204.5 350 37.4
FAN11G3669 Fragaria x ananassa HOM05D004223 ORTHO05D004792 1.6e-50 204.1 390 39.2
TPR.G12676 Trifolium pratense HOM05D004223 ORTHO05D004792 1.6e-50 204.1 354 37.6
Medtr5g091370 Medicago truncatula HOM05D004223 ORTHO05D004792 4.6e-50 202.6 352 36.9
Oeu046871.2 Olea europaea HOM05D004223 ORTHO05D004792 1.0e-49 201.4 231 53.7
Thecc.01G170900 Theobroma cacao HOM05D004223 ORTHO05D004792 1.8e-49 200.7 346 37.3
Medtr4g096650 Medicago truncatula HOM05D004223 ORTHO05D004792 3.9e-49 199.5 351 39.3
Os01g0751300 Oryza sativa ssp. japonica HOM05D004223 ORTHO05D004792 1.3e-47 194.5 360 36.7
CsaV3_1G032560 Cucumis sativus L. HOM05D004223 ORTHO05D004792 2.2e-47 193.7 330 40.0
Gohir.D07G086500 Gossypium hirsutum HOM05D004223 ORTHO05D004792 3.7e-47 193.0 322 37.6
Psat7g090920 Pisum sativum HOM05D004223 ORTHO05D004792 2.4e-46 190.3 257 44.0
SalBow7G0638 Salvia bowleyana HOM05D004223 ORTHO05D004792 1.2e-45 188.0 218 52.3
CiPaw.09G126400 Carya illinoinensis HOM05D004223 ORTHO05D004792 2.0e-45 187.2 290 44.5
DCAR_003936 Daucus carota HOM05D004223 ORTHO05D004792 2.6e-45 186.8 214 50.5
FvH4_6g38510 Fragaria vesca HOM05D004223 ORTHO05D004792 1.7e-44 184.1 255 43.9
ClCG03G006980 Citrullus lanatus HOM05D004223 ORTHO05D004792 2.2e-44 183.7 322 39.4
Psat2g016680 Pisum sativum HOM05D004223 ORTHO05D004792 5.0e-44 182.6 340 36.8
PGR042G1019 Punica granatum HOM05D004223 ORTHO05D004792 5.0e-44 182.6 346 37.0
RcHm_v2.0_Chr2g0151741 Rosa chinensis HOM05D004223 ORTHO05D004792 8.5e-44 181.8 256 44.9
HPP92_021479 Vanilla planifolia HOM05D004223 ORTHO05D004792 8.5e-44 181.8 314 37.6
ClCG02G018450 Citrullus lanatus HOM05D004223 ORTHO05D004792 1.1e-43 181.4 351 36.8
Prupe.3G175100 Prunus persica HOM05D004223 ORTHO05D004792 1.1e-43 181.4 353 37.4
Actinidia39561 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.9e-43 180.6 239 48.1
TPR.G4831 Trifolium pratense HOM05D004223 ORTHO05D004792 1.9e-43 180.6 301 39.9
Aa31LG1G24730 Aethionema arabicum HOM05D004223 ORTHO05D004792 3.2e-43 179.9 344 36.0
THA.LOC104803347 Tarenaya hassleriana HOM05D004223 ORTHO05D004792 5.5e-43 179.1 350 33.1
TAR624G0476 Trochodendron aralioides HOM05D004223 ORTHO05D004792 3.6e-42 176.4 281 42.0
MELO3C019676.2 Cucumis melo HOM05D004223 ORTHO05D004792 4.6e-42 176.0 355 35.2
MD17G1137300 Malus domestica HOM05D004223 ORTHO05D004792 4.6e-42 176.0 347 37.5
CsaV3_6G013790 Cucumis sativus L. HOM05D004223 ORTHO05D004792 1.8e-41 174.1 355 34.9
BraA07t30092Z Brassica rapa HOM05D000230 ORTHO05D000176 1.5e-40 171.0 354 33.9
Sed0004086 Sechium edule HOM05D004223 ORTHO05D004792 2.5e-40 170.2 346 35.8
AT3G59090 Arabidopsis thaliana HOM05D004223 ORTHO05D004792 5.7e-40 169.1 353 33.1
AL5G40980 Arabidopsis lyrata HOM05D004223 ORTHO05D004792 7.4e-40 168.7 353 33.1
AUR62030243 Chenopodium quinoa HOM05D004223 ORTHO05D004792 1.3e-39 167.9 225 45.8
Sed0020532 Sechium edule HOM05D004223 ORTHO05D004792 1.3e-39 167.9 342 36.3
Duzib160G0026 Durio zibethinus HOM05D004223 ORTHO05D004792 2.8e-39 166.8 360 36.7
BolC8t51023H Brassica oleracea HOM05D004223 ORTHO05D004792 3.7e-39 166.4 362 32.9
A09p51500 Brassica napus HOM05D004223 ORTHO05D004792 5.3e-38 162.5 353 31.7
CARHR169510 Cardamine hirsuta HOM05D004223 ORTHO05D004792 5.3e-38 162.5 353 32.0
CDE09G0669 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 9.1e-38 161.8 217 43.8
COL.COLO4_07169 Corchorus olitorius HOM05D000230 ORTHO05D000176 9.1e-38 161.8 245 42.0
Pp3c6_6380 Physcomitrium patens HOM05D004223 ORTHO05D004792 1.2e-37 161.4 345 33.3
BcaC07g40242 Brassica carinata HOM05D004223 ORTHO05D004792 7.7e-37 158.7 354 32.2
C08p34260 Brassica napus HOM05D004223 ORTHO05D004792 7.7e-37 158.7 362 32.0
Sabra02G0047600 Salix brachista HOM05D004223 ORTHO05D004792 7.7e-37 158.7 275 38.9
Thhalv10006050m.g Eutrema salsugineum HOM05D004223 ORTHO05D004792 1.3e-36 157.9 353 32.0
A07p24480 Brassica napus HOM05D000230 ORTHO05D000176 2.2e-36 157.1 354 32.2
C06p25880 Brassica napus HOM05D000230 ORTHO05D000176 2.2e-36 157.1 354 32.2
BolC6t37750H Brassica oleracea HOM05D000230 ORTHO05D000176 2.2e-36 157.1 354 32.2
BraA09t40587Z Brassica rapa HOM05D004223 ORTHO05D004792 2.2e-36 157.1 355 31.5
Eucgr.A02011 Eucalyptus grandis HOM05D004223 ORTHO05D004792 1.9e-35 154.1 223 45.7
Sp5g03900 Schrenkiella parvula HOM05D004223 ORTHO05D004792 3.2e-35 153.3 353 32.0
Carub.0005s2585 Capsella rubella HOM05D004223 ORTHO05D004792 4.2e-35 152.9 353 30.9
Pp3c5_22420 Physcomitrium patens HOM05D004223 ORTHO05D004792 4.2e-35 152.9 256 37.1
BcaC07g40241 Brassica carinata HOM05D004223 ORTHO05D004792 2.7e-34 150.2 311 33.8
BcaC08g44958 Brassica carinata HOM05D000230 ORTHO05D000176 1.0e-33 148.3 326 32.8
Mapoly0056s0052 Marchantia polymorpha HOM05D004223 ORTHO05D004792 6.7e-33 145.6 264 35.6
MSTRG.16215 Avicennia marina HOM05D004223 ORTHO05D004792 1.1e-32 144.8 114 63.2
Hund21517 Selenicereus undatus HOM05D004223 ORTHO05D004792 3.3e-32 143.3 206 46.6
SMO296G0001 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 2.2e-31 140.6 266 35.3
FAN02G1578 Fragaria x ananassa HOM05D004223 ORTHO05D004792 3.7e-31 139.8 228 40.4
FAN21G3874 Fragaria x ananassa HOM05D004223 ORTHO05D004792 3.4e-29 133.3 214 45.3
FAN16G0695 Fragaria x ananassa HOM05D004223 ORTHO05D004792 1.3e-28 131.3 359 32.6
Actinidia22922 Actinidia chinensis HOM05D004223 ORTHO05D004792 3.8e-28 129.8 114 57.9
unitig_37.g12104 Utricularia gibba HOM05D004223 ORTHO05D004792 5.0e-28 129.4 242 40.1
Oeu040113.1 Olea europaea HOM05D004223 ORTHO05D004792 6.5e-28 129.0 113 61.9
Atru.chr10.1338 Acer truncatum HOM05D004223 ORTHO05D004792 1.1e-27 128.3 182 43.4
unitig_37.g12105 Utricularia gibba HOM05D004223 ORTHO05D004792 1.9e-27 127.5 120 58.3
Pp3c25_8320 Physcomitrium patens HOM05D004223 ORTHO05D004792 5.5e-27 125.9 257 33.1
Ah.14g086580 Amaranthus hybridus HOM05D004223 ORTHO05D004792 9.4e-27 125.2 215 40.0
COL.COLO4_06072 Corchorus olitorius HOM05D004223 ORTHO05D004792 2.1e-26 124.0 112 62.5
BcaB02g07485 Brassica carinata HOM05D004223 ORTHO05D004792 4.7e-26 122.9 399 27.8
Atru.chr10.1339 Acer truncatum HOM05D004223 ORTHO05D004792 1.1e-24 118.2 120 55.0
Ca_18272_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 1.1e-24 118.2 114 53.5
FAN14G4329 Fragaria x ananassa HOM05D004223 ORTHO05D004792 8.2e-23 112.1 185 40.5
CSS0012222 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 1.1e-22 111.7 124 51.6
vmacro10944 Vaccinium macrocarpon HOM05D004223 ORTHO05D004792 1.2e-21 108.2 444 25.5
Duzib138G1261 Durio zibethinus HOM05D004223 ORTHO05D004792 1.7e-20 104.4 116 48.3
Oeu040112.1 Olea europaea HOM05D004223 ORTHO05D004792 2.2e-20 104.0 152 43.4
MBI10_g27412_MAGBIO Magnolia biondii HOM05D004223 ORTHO05D004792 8.0e-18 95.5 96 56.2
Haze_05551 Corylus avellana HOM05D004223 ORTHO05D004792 1.5e-16 91.3 87 55.2
CSS0013327 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 3.3e-16 90.1 102 52.0
PGSC0003DMG400012960 Solanum tuberosum HOM05D004223 ORTHO05D004792 1.1e-14 85.1 76 57.9
Haze_13521 Corylus avellana HOM05D004223 ORTHO05D004792 7.0e-14 82.4 68 61.8
Dinv05252 Davidia involucrata HOM05D004223 ORTHO05D004792 1.2e-13 81.6 72 59.7
FAN05G0022 Fragaria x ananassa HOM05D004223 ORTHO05D004792 2.0e-13 80.9 218 30.7
CDE02G0113 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 5.9e-13 79.3 82 52.4
SMO174G0155 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 5.0e-12 76.3 214 29.9
Actinidia22925 Actinidia chinensis HOM05D004223 ORTHO05D004792 6.1e-10 69.3 55 60.0
TPR.G14049 Trifolium pratense HOM05D004223 ORTHO05D004792 2.3e-09 67.4 99 41.4
vmacro10943 Vaccinium macrocarpon HOM05D004223 ORTHO05D004792 2.3e-09 67.4 53 62.3
FAN02G3483 Fragaria x ananassa HOM05D004223 ORTHO05D025614 4.8e-07 59.7 46 52.2
CSS0014222 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 9.1e-06 55.5 51 56.9
Dinv05253 Davidia involucrata HOM05D004223 ORTHO05D004792 9.1e-06 55.5 82 39.0


User provided reference genes

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