Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold333G48994 Striga asiatica HOM05D006198 ORTHO05D008226 7.0e-134 480.7 260 100.0
MSTRG.16229 Avicennia marina HOM05D006198 ORTHO05D008226 2.6e-104 382.5 261 81.6
SGA_v2.0_scaffold1G00157 Striga asiatica HOM05D006198 ORTHO05D008226 4.2e-102 375.2 260 81.2
SalBow8G2100 Salvia bowleyana HOM05D006198 ORTHO05D008226 8.7e-100 367.5 267 77.9
Migut.M00923 Erythranthe guttata HOM05D006198 ORTHO05D008226 3.4e-96 355.5 263 76.4
Nitab4.5_0005219g0070 Nicotiana tabacum HOM05D006198 ORTHO05D008226 4.6e-85 318.5 259 69.9
Nitab4.5_0001655g0050 Nicotiana tabacum HOM05D006198 ORTHO05D008226 8.7e-84 314.3 259 69.5
unitig_578.g16668 Utricularia gibba HOM05D006198 ORTHO05D008226 8.2e-82 307.8 257 67.7
Sopen02g019760 Solanum pennellii HOM05D006198 ORTHO05D008226 7.6e-80 301.2 262 68.3
CAN.G650.24 Capsicum annuum HOM05D006198 ORTHO05D008226 2.5e-78 296.2 269 64.7
PGSC0003DMG401008288 Solanum tuberosum HOM05D006198 ORTHO05D008226 2.5e-78 296.2 263 68.1
Dinv30723 Davidia involucrata HOM05D006198 ORTHO05D008226 2.7e-77 292.7 262 66.0
Actinidia39563 Actinidia chinensis HOM05D006198 ORTHO05D008226 3.3e-75 285.8 263 67.3
Lj2A307G26 Lonicera japonica HOM05D006198 ORTHO05D008226 1.3e-74 283.9 263 64.6
Thecc.06G152500 Theobroma cacao HOM05D006198 ORTHO05D008226 6.3e-74 281.6 265 65.7
Manes.15G120300 Manihot esculenta HOM05D006198 ORTHO05D008226 1.4e-73 280.4 260 66.2
Oeu030914.3 Olea europaea HOM05D006198 ORTHO05D008226 1.8e-73 280.0 300 57.3
Peaxi162Scf00796g00114 Petunia axillaris HOM05D006198 ORTHO05D008226 5.3e-73 278.5 251 62.9
COL.COLO4_38286 Corchorus olitorius HOM05D006198 ORTHO05D008226 6.9e-73 278.1 267 64.0
Duzib160G0456 Durio zibethinus HOM05D006198 ORTHO05D008226 2.6e-72 276.2 263 64.6
Cc09_g09250 Coffea canephora HOM05D006198 ORTHO05D008226 1.0e-71 274.2 231 69.3
Nn3g20699 Nelumbo nucifera HOM05D006198 ORTHO05D008226 1.3e-71 273.9 252 64.7
FAN16G3463 Fragaria x ananassa HOM05D006198 ORTHO05D008226 1.7e-71 273.5 254 63.8
QL05p058855 Quercus lobata HOM05D006198 ORTHO05D008226 3.8e-71 272.3 264 62.1
CiPaw.09G125600 Carya illinoinensis HOM05D006198 ORTHO05D008226 5.0e-71 271.9 260 63.8
MD10G1263800 Malus domestica HOM05D006198 ORTHO05D008226 5.0e-71 271.9 266 62.0
FvH4_3g05790 Fragaria vesca HOM05D006198 ORTHO05D008226 1.9e-70 270.0 252 63.5
Cpa.g.sc166.25 Carica papaya HOM05D006198 ORTHO05D008226 3.2e-70 269.2 257 65.4
Prupe.4G078700 Prunus persica HOM05D006198 ORTHO05D008226 4.2e-70 268.9 262 63.4
RcHm_v2.0_Chr5g0013711 Rosa chinensis HOM05D006198 ORTHO05D008226 5.5e-70 268.5 257 63.8
Hma1.2p1_0259F.1_g104290 Hydrangea macrophylla HOM05D006198 ORTHO05D008226 9.3e-70 267.7 251 64.5
Lalb_Chr12g0208941 Lupinus albus HOM05D006198 ORTHO05D008226 1.2e-69 267.3 263 62.0
TWI09G1426 Tripterygium wilfordii HOM05D006198 ORTHO05D008226 1.6e-69 266.9 263 63.1
HanXRQChr01g0020411 Helianthus annuus HOM05D006198 ORTHO05D008226 3.6e-69 265.8 259 62.5
ECA248G2800 Erigeron canadensis HOM05D006198 ORTHO05D008226 4.6e-69 265.4 256 61.3
vmacro15943 Vaccinium macrocarpon HOM05D006198 ORTHO05D008226 4.6e-69 265.4 263 61.6
FAN11G0340 Fragaria x ananassa HOM05D006198 ORTHO05D008226 7.9e-69 264.6 252 62.3
arahy.Tifrunner.gnm1.ann1.8B838V Arachis hypogaea HOM05D006198 ORTHO05D008226 1.0e-68 264.2 252 62.3
arahy.Tifrunner.gnm1.ann1.ET305C Arachis hypogaea HOM05D006198 ORTHO05D008226 1.0e-68 264.2 252 62.3
Nn6g32274 Nelumbo nucifera HOM05D006198 ORTHO05D008226 1.0e-68 264.2 252 63.5
TAR629G2249 Trochodendron aralioides HOM05D006198 ORTHO05D008226 1.0e-68 264.2 261 60.9
MELO3C007142.2 Cucumis melo HOM05D006198 ORTHO05D008226 1.3e-68 263.8 260 61.9
Gohir.A09G077700 Gossypium hirsutum HOM05D006198 ORTHO05D008226 1.8e-68 263.5 266 63.2
CsaV3_6G051650 Cucumis sativus L. HOM05D006198 ORTHO05D008226 2.3e-68 263.1 255 62.0
Gohir.D09G077900 Gossypium hirsutum HOM05D006198 ORTHO05D008226 3.9e-68 262.3 265 62.3
TWI53G0219 Tripterygium wilfordii HOM05D006198 ORTHO05D008226 3.9e-68 262.3 262 63.0
ClCG01G024530 Citrullus lanatus HOM05D006198 ORTHO05D008226 5.1e-68 261.9 257 62.3
Eucgr.E02394 Eucalyptus grandis HOM05D006198 ORTHO05D008226 5.1e-68 261.9 259 63.3
Lsat_1_v5_gn_1_96760 Lactuca sativa HOM05D006198 ORTHO05D008226 8.7e-68 261.2 253 61.7
Potri.011G080300 Populus trichocarpa HOM05D006198 ORTHO05D008226 8.7e-68 261.2 266 61.7
TAR629G0041 Trochodendron aralioides HOM05D006198 ORTHO05D008226 1.1e-67 260.8 253 61.3
DCAR_025303 Daucus carota HOM05D006198 ORTHO05D008226 1.5e-67 260.4 259 61.0
Ciclev10016356m.g Citrus clementina HOM05D006198 ORTHO05D008226 1.9e-67 260.0 262 63.0
Gorai.006G093100 Gossypium raimondii HOM05D006198 ORTHO05D008226 1.9e-67 260.0 266 62.8
Atru.chr10.1293 Acer truncatum HOM05D006198 ORTHO05D008226 2.5e-67 259.6 264 61.0
Atru.chr10.1313 Acer truncatum HOM05D006198 ORTHO05D008226 2.5e-67 259.6 264 61.4
MBI10_g21114_MAGBIO Magnolia biondii HOM05D006198 ORTHO05D008226 2.5e-67 259.6 254 58.3
Sed0015649 Sechium edule HOM05D006198 ORTHO05D008226 7.4e-67 258.1 259 59.5
Actinidia07684 Actinidia chinensis HOM05D006198 ORTHO05D008226 8.2e-66 254.6 263 61.2
Glyma.09G082200 Glycine max HOM05D006198 ORTHO05D008226 8.2e-66 254.6 256 60.5
Atru.chr10.1297 Acer truncatum HOM05D006198 ORTHO05D008226 4.1e-65 252.3 264 59.8
Lj4g0025062 Lotus japonicus HOM05D006198 ORTHO05D003063 9.1e-65 251.1 263 58.9
CANSAT35G1481 Cannabis sativa HOM05D006198 ORTHO05D008226 1.2e-64 250.8 261 59.4
GSVIVG01021428001 Vitis vinifera HOM05D006198 ORTHO05D008226 3.4e-64 249.2 239 64.4
Glyma.15G190700 Glycine max HOM05D006198 ORTHO05D008226 7.7e-64 248.1 257 58.0
Sc24g0001850 Simmondsia chinensis HOM05D006198 ORTHO05D008226 1.0e-63 247.7 255 59.6
Ca_18268_v3 Cicer arietinum L. HOM05D006198 ORTHO05D008226 1.3e-63 247.3 251 58.2
PSO170G0869 Papaver somniferum HOM05D006198 ORTHO05D008226 1.3e-63 247.3 251 59.4
Psat7g090320 Pisum sativum HOM05D006198 ORTHO05D008226 1.7e-63 246.9 258 58.9
PGR083G0877 Punica granatum HOM05D006198 ORTHO05D008226 5.0e-63 245.4 262 58.4
ATR0585G073 Amborella trichopoda HOM05D006198 ORTHO05D008226 8.5e-63 244.6 261 57.1
Aqoxy4G00108 Aquilegia oxysepala HOM05D006198 ORTHO05D008226 8.5e-63 244.6 253 58.1
Os01g0666500 Oryza sativa ssp. japonica HOM05D006198 ORTHO05D008226 1.1e-62 244.2 258 57.4
Cfa000959 Carpinus fangiana HOM05D006198 ORTHO05D008226 1.9e-62 243.4 241 63.9
Haze_05575 Corylus avellana HOM05D006198 ORTHO05D008226 4.2e-62 242.3 317 51.7
Zm00001eb157440 Zea mays HOM05D006198 ORTHO05D008226 2.1e-61 240.0 253 57.7
EL10Ac8g19743 Beta vulgaris HOM05D006198 ORTHO05D008226 3.6e-61 239.2 268 56.3
Phvul.009G219000 Phaseolus vulgaris HOM05D006198 ORTHO05D008226 6.1e-61 238.4 264 56.1
AUR62030229 Chenopodium quinoa HOM05D006198 ORTHO05D008226 1.0e-60 237.7 305 51.5
Zm00001eb359760 Zea mays HOM05D006198 ORTHO05D008226 1.8e-60 236.9 255 57.6
CDE02G2137 Ceratophyllum demersum HOM05D006198 ORTHO05D008226 2.3e-60 236.5 250 56.8
Medtr4g096750 Medicago truncatula HOM05D006198 ORTHO05D008226 2.3e-60 236.5 255 54.9
HPP92_023299 Vanilla planifolia HOM05D006198 ORTHO05D008226 3.0e-60 236.1 252 57.1
HPP92_023266 Vanilla planifolia HOM05D006198 ORTHO05D008226 1.5e-59 233.8 252 57.1
VMungo1309G2860 Vigna mungo HOM05D006198 ORTHO05D008226 1.3e-58 230.7 287 51.9
Solyc02g070680.4 Solanum lycopersicum HOM05D006198 ORTHO05D008226 4.8e-58 228.8 210 64.3
AUR62027530 Chenopodium quinoa HOM05D006198 ORTHO05D008226 4.5e-56 222.2 287 52.6
SEGI_09220 Sequoiadendron giganteum HOM05D006198 ORTHO05D008226 3.2e-54 216.1 258 51.9
Thhalv10024846m.g Eutrema salsugineum HOM05D006198 ORTHO05D003063 4.4e-51 205.7 252 53.2
THA.LOC104827723 Tarenaya hassleriana HOM05D006198 ORTHO05D008226 9.7e-51 204.5 263 51.7
Carub.0007s2303 Capsella rubella HOM05D006198 ORTHO05D008226 2.8e-50 203.0 258 51.9
Aa31LG6G950 Aethionema arabicum HOM05D006198 ORTHO05D008226 8.2e-50 201.4 253 52.2
Rhsim02G0156800 Rhododendron simsii HOM05D006198 ORTHO05D008226 8.2e-50 201.4 250 52.8
C07p49570 Brassica napus HOM05D006198 ORTHO05D003063 1.8e-49 200.3 260 51.9
AagrBONN_evm.TU.Sc2ySwM_228.4358 Anthoceros agrestis HOM05D006198 ORTHO05D008226 3.1e-49 199.5 251 51.4
A03p51170 Brassica napus HOM05D006198 ORTHO05D003063 4.1e-49 199.1 252 52.8
BraA03t14199Z Brassica rapa HOM05D006198 ORTHO05D003063 5.3e-49 198.7 252 52.8
BolC7t45461H Brassica oleracea HOM05D006198 ORTHO05D003063 2.0e-48 196.8 260 51.2
Sp7g15810 Schrenkiella parvula HOM05D006198 ORTHO05D008226 2.6e-48 196.4 249 51.8
Sabra11G0070000 Salix brachista HOM05D006198 ORTHO05D008226 3.8e-47 192.6 214 55.6
AL7G36130 Arabidopsis lyrata HOM05D006198 ORTHO05D003063 6.5e-47 191.8 263 49.8
Sabra11G0067700 Salix brachista HOM05D006198 ORTHO05D008226 1.1e-46 191.0 213 55.4
PSO017G1039 Papaver somniferum HOM05D006198 ORTHO05D008226 2.5e-46 189.9 216 53.2
Mapoly0061s0133 Marchantia polymorpha HOM05D006198 ORTHO05D008226 8.0e-45 184.9 248 49.6
Pp3c24_15440 Physcomitrium patens HOM05D006198 ORTHO05D008226 4.4e-43 179.1 264 46.6
BcaNung05671 Brassica carinata HOM05D006198 ORTHO05D008226 2.8e-42 176.4 237 50.6
BcaNung05123 Brassica carinata HOM05D006198 ORTHO05D008226 8.2e-42 174.9 238 50.8
Hund21523 Selenicereus undatus HOM05D006198 ORTHO05D008226 5.0e-39 165.6 154 63.0
SMO361G0608 Selaginella moellendorffii HOM05D006198 ORTHO05D008226 6.5e-39 165.2 247 44.1
CARHR225050 Cardamine hirsuta HOM05D006198 ORTHO05D008226 2.0e-35 153.7 161 59.6
CDE08G0452 Ceratophyllum demersum HOM05D001706 ORTHO05D008226 4.0e-28 129.4 148 52.7
Zm00001eb243030 Zea mays HOM05D006198 ORTHO05D008226 2.7e-24 116.7 122 53.3
Zm00001eb373810 Zea mays HOM05D006198 ORTHO05D008226 2.7e-24 116.7 122 53.3
CBR_g31781 Chara braunii HOM05D000019 ORTHO05D000048 8.0e-21 105.1 250 35.6
Zm00001eb235600 Zea mays HOM05D006198 ORTHO05D008226 1.0e-20 104.8 114 50.0
Atru.chr10.1305 Acer truncatum HOM05D006198 ORTHO05D008226 1.5e-19 100.9 127 53.5
Atru.chr10.1302 Acer truncatum HOM05D000067 ORTHO05D000280 7.5e-19 98.6 77 70.1
HanXRQChr14g0435081 Helianthus annuus HOM05D006198 ORTHO05D008226 2.7e-16 90.1 107 55.1
SEGI_25377 Sequoiadendron giganteum HOM05D006198 ORTHO05D008226 1.0e-15 88.2 100 53.0
Gohir.D05G152000 Gossypium hirsutum HOM05D006198 ORTHO05D008226 3.0e-15 86.7 72 69.4
CBR_g39020 Chara braunii HOM05D006198 ORTHO05D001303 2.5e-14 83.6 220 35.0
Gorai.009G156000 Gossypium raimondii HOM05D006198 ORTHO05D008226 1.6e-13 80.9 76 65.8
MD05G1286000 Malus domestica HOM05D006198 ORTHO05D008226 1.2e-08 64.7 55 70.9
Cre12.g523832 Chlamydomonas reinhardtii HOM05D006198 ORTHO05D008226 4.6e-08 62.8 175 32.6
Cre12.g523800 Chlamydomonas reinhardtii HOM05D006198 ORTHO05D008226 6.0e-08 62.4 62 58.1
Sabra11G0067800 Salix brachista HOM05D006198 ORTHO05D008226 3.9e-07 59.7 53 71.7
Sabra11G0070100 Salix brachista HOM05D006198 ORTHO05D008226 3.9e-07 59.7 53 71.7


User provided reference genes

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