Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 1.8e-193 679.1 345 100.0
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 4.4e-99 365.5 219 85.4
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 2.2e-95 353.2 226 78.8
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 3.0e-92 342.8 227 76.7
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 4.1e-89 332.4 223 76.7
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 1.2e-88 330.9 222 76.1
SalBow8G3565 Salvia bowleyana HOM05D005618 ORTHO05D007278 4.5e-88 328.9 227 74.0
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 9.5e-86 321.2 222 75.7
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 1.2e-85 320.9 220 74.1
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 2.1e-85 320.1 220 73.2
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 4.7e-85 318.9 221 72.4
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 8.0e-85 318.2 220 74.5
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 1.0e-84 317.8 223 74.4
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 1.4e-84 317.4 226 70.4
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 2.3e-84 316.6 219 73.5
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 5.2e-84 315.5 221 73.3
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 6.8e-84 315.1 236 69.1
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 1.2e-83 314.3 217 70.5
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 2.0e-83 313.5 220 72.3
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 2.0e-83 313.5 221 71.9
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 2.6e-83 313.2 216 72.7
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 4.4e-83 312.4 219 71.7
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 9.8e-83 311.2 219 69.9
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 2.2e-82 310.1 221 70.6
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 2.8e-82 309.7 216 71.3
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 3.7e-82 309.3 220 70.5
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 4.9e-82 308.9 220 70.5
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 8.3e-82 308.1 216 69.9
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 8.3e-82 308.1 219 69.9
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 1.1e-81 307.8 222 72.1
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 1.8e-81 307.0 221 69.7
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 2.4e-81 306.6 219 71.7
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 4.1e-81 305.8 284 58.5
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 5.4e-81 305.4 223 69.5
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 5.4e-81 305.4 222 70.3
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 5.4e-81 305.4 221 69.2
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 7.0e-81 305.1 223 69.5
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 9.2e-81 304.7 223 69.1
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 9.2e-81 304.7 223 69.5
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 2.7e-80 303.1 220 70.9
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 3.5e-80 302.8 224 70.1
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 3.5e-80 302.8 217 68.7
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 4.5e-80 302.4 219 68.5
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 4.5e-80 302.4 221 67.0
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 5.9e-80 302.0 216 69.4
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 5.9e-80 302.0 221 70.1
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.0e-79 301.2 223 68.6
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 1.3e-79 300.8 216 69.4
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 1.3e-79 300.8 221 69.7
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 1.3e-79 300.8 217 67.7
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 1.7e-79 300.4 215 69.3
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 2.9e-79 299.7 220 69.1
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 2.9e-79 299.7 217 68.7
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 2.9e-79 299.7 216 69.4
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 3.8e-79 299.3 222 70.3
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 8.6e-79 298.1 219 67.6
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 8.6e-79 298.1 217 69.6
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 1.1e-78 297.7 220 69.1
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 1.1e-78 297.7 220 69.1
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 1.5e-78 297.4 220 68.2
AT1G30070 Arabidopsis thaliana HOM05D005618 ORTHO05D007278 1.9e-78 297.0 220 64.1
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 1.9e-78 297.0 226 67.3
THA.LOC104814300 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 3.3e-78 296.2 216 65.7
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 5.6e-78 295.4 218 68.8
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 7.3e-78 295.0 211 71.1
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 7.3e-78 295.0 220 67.7
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 2.1e-77 293.5 219 67.1
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 3.6e-77 292.7 219 64.8
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 4.7e-77 292.4 222 69.4
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 4.7e-77 292.4 241 63.9
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 4.7e-77 292.4 216 66.7
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 6.1e-77 292.0 217 66.4
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 6.1e-77 292.0 219 68.0
AL1G43960 Arabidopsis lyrata HOM05D005618 ORTHO05D007278 8.0e-77 291.6 219 62.1
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 1.0e-76 291.2 217 67.7
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 1.0e-76 291.2 225 68.9
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 1.0e-76 291.2 219 63.5
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 1.4e-76 290.8 219 66.7
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 1.4e-76 290.8 219 63.5
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 1.4e-76 290.8 217 67.7
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 1.4e-76 290.8 265 60.4
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 1.8e-76 290.4 217 67.3
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 3.0e-76 289.7 216 67.6
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 4.0e-76 289.3 222 61.7
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 5.2e-76 288.9 220 66.8
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 6.8e-76 288.5 219 62.6
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 6.8e-76 288.5 219 62.6
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 8.9e-76 288.1 215 66.0
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 1.2e-75 287.7 217 66.4
Carub.0001s2829 Capsella rubella HOM05D005618 ORTHO05D007278 2.0e-75 287.0 216 63.4
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 3.4e-75 286.2 212 71.2
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 4.4e-75 285.8 254 61.4
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 7.5e-75 285.0 219 63.9
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 9.8e-75 284.6 233 61.4
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 2.2e-74 283.5 219 61.6
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 2.2e-74 283.5 219 61.6
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 2.9e-74 283.1 221 66.1
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 3.7e-74 282.7 224 65.6
CARHR029340 Cardamine hirsuta HOM05D005618 ORTHO05D007278 3.7e-74 282.7 217 61.3
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 4.9e-74 282.3 221 66.1
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 7.0e-73 278.5 216 62.0
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 2.3e-71 273.5 215 62.3
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 3.0e-71 273.1 216 67.1
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 5.6e-70 268.9 254 57.9
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 1.6e-69 267.3 174 72.4
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 2.1e-69 266.9 186 72.0
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 2.8e-69 266.5 213 63.4
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 6.2e-69 265.4 222 58.6
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 2.3e-68 263.5 153 79.1
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 2.6e-67 260.0 206 62.6
MD10G1261800 Malus domestica HOM05D005618 ORTHO05D007278 5.8e-67 258.8 212 65.1
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 2.4e-65 253.4 218 60.6
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 4.7e-61 239.2 187 64.7
Rhsim02G0158200 Rhododendron simsii HOM05D005618 ORTHO05D007278 1.7e-58 230.7 190 63.7
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 4.9e-58 229.2 197 62.4
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 1.9e-57 227.3 216 54.2
Mapoly0148s0015 Marchantia polymorpha HOM05D005618 ORTHO05D007278 5.4e-57 225.7 239 49.0
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 1.1e-54 218.0 131 73.3
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 8.9e-52 208.4 119 79.8
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 5.8e-51 205.7 218 54.1
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 7.6e-51 205.3 113 85.0
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05D005618 ORTHO05D007278 3.8e-50 203.0 248 45.2
SMO364G0114 Selaginella moellendorffii HOM05D005618 ORTHO05D007278 1.2e-48 198.0 206 51.9
Prupe.4G081000 Prunus persica HOM05D005618 ORTHO05D007278 5.1e-47 192.6 234 47.0
CBR_g22260 Chara braunii HOM05D005618 ORTHO05D007278 8.4e-42 175.3 256 37.5
MBI16_g34289_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 4.3e-38 162.9 100 76.0
AUR62040575 Chenopodium quinoa HOM05D005618 ORTHO05D007278 8.1e-37 158.7 173 49.7
SHI24907 Sapria himalayana HOM05D005618 ORTHO05D007278 2.9e-34 150.2 179 48.0
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 4.9e-26 122.9 247 38.1
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 3.1e-12 77.0 40 90.0
Aqoxy7G01552 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 1.9e-09 67.8 34 88.2
SHI24908 Sapria himalayana HOM05D005618 ORTHO05D007278 1.9e-09 67.8 89 47.2
MBI18_g05572_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 2.7e-08 63.9 42 66.7
SMO353G0169 Selaginella moellendorffii HOM05D005618 ORTHO05D001361 6.1e-08 62.8 38 71.1
SMO364G0864 Selaginella moellendorffii HOM05D005618 ORTHO05D374196 1.1e-06 58.5 212 26.4
Cpa.g.sc246.8 Carica papaya HOM05D005618 ORTHO05D118306 5.7e-06 56.2 46 60.9


User provided reference genes

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