Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold333G48980 Striga asiatica HOM05D005657 ORTHO05D007104 1.5e-164 582.8 291 100.0
Migut.D01761 Erythranthe guttata HOM05D005657 ORTHO05D007104 1.4e-61 240.7 222 58.1
SalBow8G0891 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.7e-56 223.8 130 79.2
Lj2A319G39 Lonicera japonica HOM05D005657 ORTHO05D007104 5.0e-56 222.2 129 78.3
MSTRG.16252 Avicennia marina HOM05D005657 ORTHO05D007104 1.1e-55 221.1 127 78.7
DCAR_007885 Daucus carota HOM05D005657 ORTHO05D007104 2.5e-55 219.9 129 76.7
Oeu042460.1 Olea europaea HOM05D005657 ORTHO05D007104 5.6e-55 218.8 130 77.7
Actinidia39582 Actinidia chinensis HOM05D005657 ORTHO05D007104 7.3e-55 218.4 126 76.2
Cfa000932 Carpinus fangiana HOM05D005657 ORTHO05D007104 1.8e-53 213.8 126 77.8
ECA234G1983 Erigeron canadensis HOM05D005657 ORTHO05D007104 1.8e-53 213.8 126 77.8
CSS0046586 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 3.1e-53 213.0 130 73.1
CAN.G1744.1 Capsicum annuum HOM05D005657 ORTHO05D007104 6.8e-53 211.8 130 76.2
CiPaw.09G122400 Carya illinoinensis HOM05D005657 ORTHO05D007104 6.8e-53 211.8 127 76.4
Eucgr.E01441 Eucalyptus grandis HOM05D005657 ORTHO05D007104 8.9e-53 211.5 130 75.4
PGSC0003DMG401013075 Solanum tuberosum HOM05D005657 ORTHO05D007104 1.5e-52 210.7 130 76.2
Solyc05g053950.4 Solanum lycopersicum HOM05D005657 ORTHO05D007104 2.0e-52 210.3 130 76.2
Sopen05g032420 Solanum pennellii HOM05D005657 ORTHO05D007104 2.0e-52 210.3 130 76.2
HanXRQChr16g0525711 Helianthus annuus HOM05D005657 ORTHO05D007104 2.6e-52 209.9 126 76.2
Nitab4.5_0000717g0030 Nicotiana tabacum HOM05D005657 ORTHO05D007104 2.6e-52 209.9 129 75.2
arahy.Tifrunner.gnm1.ann1.PL5EIV Arachis hypogaea HOM05D005657 ORTHO05D007104 4.4e-52 209.1 126 74.6
Potri.011G084000 Populus trichocarpa HOM05D005657 ORTHO05D007104 5.8e-52 208.8 129 72.9
TAR626G1592 Trochodendron aralioides HOM05D005657 ORTHO05D007104 5.8e-52 208.8 133 72.9
VMungo0540G0312 Vigna mungo HOM05D005657 ORTHO05D007104 7.5e-52 208.4 127 74.0
Dinv30768 Davidia involucrata HOM05D005657 ORTHO05D007104 9.8e-52 208.0 127 74.8
CSS0036233 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 1.7e-51 207.2 130 71.5
Lsat_1_v5_gn_4_29400 Lactuca sativa HOM05D005657 ORTHO05D007104 1.7e-51 207.2 126 76.2
Glyma.13G219000 Glycine max HOM05D005657 ORTHO05D007104 2.2e-51 206.8 126 73.8
Nitab4.5_0000484g0050 Nicotiana tabacum HOM05D005657 ORTHO05D007104 2.2e-51 206.8 129 73.6
arahy.Tifrunner.gnm1.ann1.1GZ3A6 Arachis hypogaea HOM05D005657 ORTHO05D007104 3.7e-51 206.1 126 73.8
Lj6g0016438 Lotus japonicus HOM05D005657 ORTHO05D007104 3.7e-51 206.1 126 73.8
QL05p057428 Quercus lobata HOM05D005657 ORTHO05D007104 6.4e-51 205.3 132 73.5
GSVIVG01021513001 Vitis vinifera HOM05D005657 ORTHO05D007104 6.4e-51 205.3 127 74.8
Hma1.2p1_0020F.1_g014110 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 8.3e-51 204.9 127 74.0
Peaxi162Scf00394g00119 Petunia axillaris HOM05D005657 ORTHO05D007104 2.4e-50 203.4 129 75.2
ClCG01G024690 Citrullus lanatus HOM05D005657 ORTHO05D007104 4.1e-50 202.6 127 73.2
Thecc.06G148800 Theobroma cacao HOM05D005657 ORTHO05D007104 4.1e-50 202.6 130 71.5
Aqoxy1G01688 Aquilegia oxysepala HOM05D005657 ORTHO05D007104 7.1e-50 201.8 158 60.1
Gohir.A05G147800 Gossypium hirsutum HOM05D005657 ORTHO05D007104 7.1e-50 201.8 130 71.5
Gohir.D05G150300 Gossypium hirsutum HOM05D005657 ORTHO05D007104 7.1e-50 201.8 130 71.5
Gorai.009G154400 Gossypium raimondii HOM05D005657 ORTHO05D007104 7.1e-50 201.8 130 71.5
Lalb_Chr18g0055371 Lupinus albus HOM05D005657 ORTHO05D007104 7.1e-50 201.8 128 71.9
Nn4g26588 Nelumbo nucifera HOM05D005657 ORTHO05D007104 9.2e-50 201.4 131 70.2
Psat1g188200 Pisum sativum HOM05D005657 ORTHO05D007104 9.2e-50 201.4 126 73.8
TPR.G26242 Trifolium pratense HOM05D005657 ORTHO05D007104 9.2e-50 201.4 126 73.0
CANSAT35G1510 Cannabis sativa HOM05D005657 ORTHO05D007104 1.6e-49 200.7 128 74.2
Sabra11G0066600 Salix brachista HOM05D005657 ORTHO05D007104 1.6e-49 200.7 165 60.0
Manes.17G071500 Manihot esculenta HOM05D005657 ORTHO05D007104 3.5e-49 199.5 127 70.9
Cc07_g20130 Coffea canephora HOM05D005657 ORTHO05D007104 4.6e-49 199.1 127 72.4
Ca_00535_v3 Cicer arietinum L. HOM05D005657 ORTHO05D007104 6.0e-49 198.7 126 72.2
Ciclev10015992m.g Citrus clementina HOM05D005657 ORTHO05D007104 6.0e-49 198.7 126 73.0
Medtr2g019220 Medicago truncatula HOM05D005657 ORTHO05D007104 7.8e-49 198.4 126 71.4
MD05G1282500 Malus domestica HOM05D005657 ORTHO05D007104 1.3e-48 197.6 128 73.4
PGR031G0971 Punica granatum HOM05D005657 ORTHO05D007104 1.7e-48 197.2 129 71.3
Sc24g0001740 Simmondsia chinensis HOM05D005657 ORTHO05D007104 3.0e-48 196.4 127 70.9
Aa31LG6G5550 Aethionema arabicum HOM05D005657 ORTHO05D007104 3.9e-48 196.1 127 71.7
TPR.G26236 Trifolium pratense HOM05D005657 ORTHO05D007104 3.9e-48 196.1 128 68.0
Duzib192G0691 Durio zibethinus HOM05D005657 ORTHO05D007104 6.6e-48 195.3 146 65.1
AUR62030180 Chenopodium quinoa HOM05D005657 ORTHO05D007104 8.6e-48 194.9 126 70.6
Haze_05617 Corylus avellana HOM05D005657 ORTHO05D007104 8.6e-48 194.9 159 60.4
EL10Ac8g19662 Beta vulgaris HOM05D005657 ORTHO05D007104 1.1e-47 194.5 126 71.4
CsaV3_6G051800 Cucumis sativus L. HOM05D005657 ORTHO05D007104 1.1e-47 194.5 128 71.9
AT1G30130 Arabidopsis thaliana HOM05D005657 ORTHO05D007104 1.5e-47 194.1 127 69.3
TWI53G0207 Tripterygium wilfordii HOM05D005657 ORTHO05D007104 2.5e-47 193.4 129 69.0
CARHR029280 Cardamine hirsuta HOM05D005657 ORTHO05D007104 3.3e-47 193.0 127 69.3
Prupe.4G082300 Prunus persica HOM05D005657 ORTHO05D007104 3.3e-47 193.0 128 71.1
Sed0002032 Sechium edule HOM05D005657 ORTHO05D007104 4.3e-47 192.6 127 70.1
AUR62002729 Chenopodium quinoa HOM05D005657 ORTHO05D007104 5.6e-47 192.2 127 71.7
MELO3C007126.2 Cucumis melo HOM05D005657 ORTHO05D007104 9.5e-47 191.4 127 70.1
BcaC01g00157 Brassica carinata HOM05D005657 ORTHO05D007104 1.2e-46 191.0 127 67.7
Thhalv10008271m.g Eutrema salsugineum HOM05D005657 ORTHO05D007104 1.2e-46 191.0 127 67.7
A08p24690 Brassica napus HOM05D005657 ORTHO05D007104 1.6e-46 190.7 127 67.7
Sp1g25990 Schrenkiella parvula HOM05D005657 ORTHO05D007104 1.6e-46 190.7 127 67.7
C03p76410 Brassica napus HOM05D005657 ORTHO05D007104 2.1e-46 190.3 127 67.7
BcaB03g12196 Brassica carinata HOM05D005657 ORTHO05D007104 3.6e-46 189.5 127 66.9
BcaB03g12197 Brassica carinata HOM05D005657 ORTHO05D007104 3.6e-46 189.5 127 66.9
SEGI_34988 Sequoiadendron giganteum HOM05D005657 ORTHO05D007104 4.7e-46 189.1 126 68.3
Carub.0001s2836 Capsella rubella HOM05D005657 ORTHO05D007104 6.2e-46 188.7 127 66.1
PSO339G2615 Papaver somniferum HOM05D005657 ORTHO05D007104 1.4e-45 187.6 129 65.1
BolC3t19896H Brassica oleracea HOM05D005657 ORTHO05D007104 1.8e-45 187.2 127 67.7
BraA08t34424Z Brassica rapa HOM05D005657 ORTHO05D007104 2.3e-45 186.8 127 66.1
FvH4_3g05380 Fragaria vesca HOM05D005657 ORTHO05D007104 4.0e-45 186.0 128 70.3
PSO384G4094 Papaver somniferum HOM05D005657 ORTHO05D007104 5.2e-45 185.7 129 64.3
MBI18_g24473_MAGBIO Magnolia biondii HOM05D005657 ORTHO05D007104 6.8e-45 185.3 129 66.7
vmacro10957 Vaccinium macrocarpon HOM05D005657 ORTHO05D007104 6.8e-45 185.3 176 53.4
FAN21G3134 Fragaria x ananassa HOM05D005657 ORTHO05D007104 8.9e-45 184.9 128 70.3
FAN25G2659 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.5e-44 184.1 128 69.5
Ah.09g232540 Amaranthus hybridus HOM05D005657 ORTHO05D007104 2.0e-44 183.7 130 67.7
ATR1098G050 Amborella trichopoda HOM05D005657 ORTHO05D007104 2.0e-44 183.7 128 67.2
RcHm_v2.0_Chr5g0014371 Rosa chinensis HOM05D005657 ORTHO05D007104 2.0e-44 183.7 128 68.0
FAN16G0196 Fragaria x ananassa HOM05D005657 ORTHO05D007104 2.6e-44 183.3 128 69.5
CDE01G0002 Ceratophyllum demersum HOM05D005657 ORTHO05D007104 9.9e-44 181.4 131 66.4
THA.LOC104812673 Tarenaya hassleriana HOM05D005657 ORTHO05D007104 2.9e-43 179.9 134 64.2
Os07g0153300 Oryza sativa ssp. japonica HOM05D005657 ORTHO05D007104 3.7e-43 179.5 129 67.4
Atru.chr10.1193 Acer truncatum HOM05D005657 ORTHO05D007104 6.4e-43 178.7 106 74.5
HPP92_012186 Vanilla planifolia HOM05D005657 ORTHO05D007104 6.4e-43 178.7 138 61.6
DCAR_027905 Daucus carota HOM05D005657 ORTHO05D007104 1.4e-42 177.6 131 64.9
DCAR_027907 Daucus carota HOM05D005657 ORTHO05D007104 5.1e-40 169.1 127 60.6
SMO364G0117 Selaginella moellendorffii HOM05D005657 ORTHO05D007104 6.6e-40 168.7 126 62.7
Zm00001eb300160 Zea mays HOM05D005657 ORTHO05D007104 6.6e-40 168.7 129 62.8
DCAR_027906 Daucus carota HOM05D005657 ORTHO05D007104 2.5e-39 166.8 127 59.8
AagrBONN_evm.TU.Sc2ySwM_117.1613 Anthoceros agrestis HOM05D001134 ORTHO05D001035 3.6e-38 162.9 130 60.8
Pp3c19_5890 Physcomitrium patens HOM05D005657 ORTHO05D007104 1.8e-37 160.6 126 61.1
Mapoly0156s0023 Marchantia polymorpha HOM05D005657 ORTHO05D007104 4.9e-35 152.5 129 57.4
SalBow2G3627 Salvia bowleyana HOM05D005657 ORTHO05D007104 2.4e-34 150.2 131 52.7
Hund15862 Selenicereus undatus HOM05D005657 ORTHO05D007104 3.2e-34 149.8 124 59.7
Rhsim02G0159200 Rhododendron simsii HOM05D005657 ORTHO05D007104 1.6e-30 137.5 132 57.6
Actinidia07705 Actinidia chinensis HOM05D005657 ORTHO05D007104 4.0e-29 132.9 75 78.7
Phvul.006G165700 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 4.0e-29 132.9 126 53.2
Hma1.2p1_0020F.1_g014100 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 5.8e-28 129.0 73 80.8
Rhsim02G0159300 Rhododendron simsii HOM05D005657 ORTHO05D007104 9.9e-28 128.3 129 49.6
Glyma.15G093200 Glycine max HOM05D005657 ORTHO05D007104 4.9e-27 125.9 67 85.1
SGA_v2.0_scaffold37G14914 Striga asiatica HOM05D005657 ORTHO05D007104 7.1e-26 122.1 61 91.8
Cre06.g269300 Chlamydomonas reinhardtii HOM05D005657 ORTHO05D007104 9.3e-26 121.7 126 46.8
MCO14G385 Micromonas commoda HOM05D005657 ORTHO05D007104 2.1e-25 120.6 160 40.6
CBR_g39195 Chara braunii HOM05D005657 ORTHO05D007104 2.4e-21 107.1 114 47.4
FAN11G2536 Fragaria x ananassa HOM05D005657 ORTHO05D007104 5.3e-21 105.9 126 48.4
PRCOL_00005919 Prasinoderma coloniale HOM05D005657 ORTHO05D007104 1.3e-14 84.7 136 38.2
Glyma.08G293333 Glycine max HOM05D005657 ORTHO05D007104 1.6e-14 84.3 51 68.6
unitig_26.g9757 Utricularia gibba HOM05D005657 ORTHO05D007104 6.2e-14 82.4 62 61.3
Hma1.2p1_0020F.1_g014120 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 1.1e-13 81.6 59 62.7
PGSC0003DMG400002455 Solanum tuberosum HOM05D005657 ORTHO05D007104 3.1e-13 80.1 61 63.9
unitig_26.g9756 Utricularia gibba HOM05D005657 ORTHO05D007104 1.0e-11 75.1 40 87.5
SalBow2G2566 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.9e-10 70.9 65 53.8
SGA_v2.0_scaffold119G32786 Striga asiatica HOM05D005657 ORTHO05D007104 1.6e-09 67.8 31 96.8
SGA_v2.0_scaffold118G32549 Striga asiatica HOM05D005657 ORTHO05D007104 2.3e-08 63.9 31 93.5
AUR62002725 Chenopodium quinoa HOM05D005657 ORTHO05D007104 3.0e-08 63.5 60 51.7
TPR.G26247 Trifolium pratense HOM05D005657 ORTHO05D007104 3.0e-08 63.5 36 77.8
CSS0012720 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 6.7e-08 62.4 37 70.3
Phvul.007G245866 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 1.6e-06 57.8 37 70.3
SGA_v2.0_scaffold44G16814 Striga asiatica HOM05D005657 ORTHO05D404464 1.6e-06 57.8 45 68.9


User provided reference genes

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