Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold332G48961 Striga asiatica HOM05D010621 ORTHO05D000126 1.3e-165 586.3 295 100.0
SGA_v2.0_scaffold161G37849 Striga asiatica HOM05D025911 ORTHO05D000006 1.8e-32 144.1 238 37.4
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 6.5e-27 125.6 289 32.2
SGA_v2.0_scaffold45G17215 Striga asiatica HOM05D010621 ORTHO05D000126 1.1e-18 98.2 255 31.0
SGA_v2.0_scaffold72G24063 Striga asiatica HOM05D000047 ORTHO05D000044 4.2e-18 96.3 120 49.2
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 7.2e-18 95.5 113 45.1
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 2.1e-17 94.0 302 28.8
SGA_v2.0_scaffold68G22947 Striga asiatica HOM05D025057 ORTHO05D000126 8.0e-17 92.0 289 28.7
SGA_v2.0_scaffold321G48584 Striga asiatica HOM05D010621 ORTHO05D000126 1.8e-16 90.9 174 34.5
SGA_v2.0_scaffold234G43650 Striga asiatica HOM05D037634 ORTHO05D000126 6.8e-16 89.0 102 42.2
SGA_v2.0_scaffold79G25635 Striga asiatica HOM05D010621 ORTHO05D000126 1.3e-14 84.7 71 49.3
SGA_v2.0_scaffold129G34162 Striga asiatica HOM05D010621 ORTHO05D000126 2.8e-14 83.6 132 37.9
SGA_v2.0_scaffold10G05166 Striga asiatica HOM05D016874 ORTHO05D000126 5.3e-13 79.3 74 51.4
SGA_v2.0_scaffold73G24374 Striga asiatica HOM05D010621 ORTHO05D000126 1.6e-12 77.8 121 34.7
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 2.0e-12 77.4 89 40.4
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 8.5e-11 72.0 131 29.8
SGA_v2.0_scaffold7G03810 Striga asiatica HOM05D010621 ORTHO05D000126 2.5e-10 70.5 111 36.0
SGA_v2.0_scaffold283G46955 Striga asiatica HOM05D010621 ORTHO05D000126 5.5e-10 69.3 96 38.5
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 9.4e-10 68.6 128 32.8
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 1.6e-09 67.8 97 42.3
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 3.6e-09 66.6 134 35.1
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 3.6e-09 66.6 87 33.3
SGA_v2.0_scaffold56G20035 Striga asiatica HOM05D010621 ORTHO05D000126 4.7e-09 66.2 107 38.3
SGA_v2.0_scaffold19G08685 Striga asiatica HOM05D017992 ORTHO05D000126 1.0e-08 65.1 182 26.9
Nitab4.5_0003490g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.0e-08 63.2 172 25.6
Nitab4.5_0004512g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.0e-08 63.2 129 34.1
SGA_v2.0_scaffold165G38197 Striga asiatica HOM05D000003 ORTHO05D000006 4.0e-08 63.2 250 26.8
SGA_v2.0_scaffold9G04706 Striga asiatica HOM05D025911 ORTHO05D399345 4.0e-08 63.2 108 40.7
Dinv19695 Davidia involucrata HOM05D000003 ORTHO05D000126 5.2e-08 62.8 111 36.0
Hma1.2p1_0167F.1_g073680 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 6.8e-08 62.4 69 40.6
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.8e-08 62.0 70 41.4
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.8e-08 62.0 70 38.6
QL04p037748 Quercus lobata HOM05D000003 ORTHO05D000126 1.5e-07 61.2 137 36.5
SGA_v2.0_scaffold140G35478 Striga asiatica HOM05D010621 ORTHO05D403838 1.5e-07 61.2 152 36.2
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 2.0e-07 60.8 70 38.6
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.0e-07 60.8 71 40.8
Dinv38130 Davidia involucrata HOM05D000003 ORTHO05D000126 2.6e-07 60.5 108 31.5
Nitab4.5_0011919g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 2.6e-07 60.5 125 30.4
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.4e-07 59.7 69 39.1
Dinv30133 Davidia involucrata HOM05D000003 ORTHO05D000126 4.4e-07 59.7 69 39.1
QL04p078501 Quercus lobata HOM05D000003 ORTHO05D000126 4.4e-07 59.7 82 42.7
Rhsim07G0115800 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.4e-07 59.7 70 40.0
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 5.7e-07 59.3 69 40.6
QL02p066394 Quercus lobata HOM05D000003 ORTHO05D000126 5.7e-07 59.3 70 35.7
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 9.8e-07 58.5 70 38.6
SGA_v2.0_scaffold14G07069 Striga asiatica HOM05D000367 ORTHO05D002159 9.8e-07 58.5 87 34.5
QL01p029685 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-06 58.2 72 43.1
SGA_v2.0_scaffold11G05749 Striga asiatica HOM05D017992 ORTHO05D000126 1.3e-06 58.2 109 31.2
SGA_v2.0_scaffold6G03387 Striga asiatica HOM05D016874 ORTHO05D404320 1.3e-06 58.2 141 29.8
Dinv16534 Davidia involucrata HOM05D000003 ORTHO05D000126 1.7e-06 57.8 186 32.3
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.7e-06 57.8 113 31.9
SGA_v2.0_scaffold27G11486 Striga asiatica HOM05D000552 ORTHO05D000469 1.7e-06 57.8 294 26.2
SGA_v2.0_scaffold88G27315 Striga asiatica HOM05D016874 ORTHO05D402186 1.7e-06 57.8 136 30.1
Cpa.g.sc55.183 Carica papaya HOM05D000003 ORTHO05D000126 2.2e-06 57.4 73 41.1
Nitab4.5_0007471g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.8e-06 57.0 86 29.1
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 3.7e-06 56.6 69 39.1
AUR62005474 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.7e-06 56.6 73 38.4
Atru.chr3.1587 Acer truncatum HOM05D000003 ORTHO05D000004 4.8e-06 56.2 71 35.2
Dinv12507 Davidia involucrata HOM05D022672 ORTHO05D000126 4.8e-06 56.2 52 44.2
Dinv15867 Davidia involucrata HOM05D000003 ORTHO05D000126 4.8e-06 56.2 69 37.7
SGA_v2.0_scaffold23G10110 Striga asiatica HOM05D017601 ORTHO05D000006 4.8e-06 56.2 83 36.1
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 6.3e-06 55.8 69 37.7
Lj3g0024247 Lotus japonicus HOM05D000003 ORTHO05D000126 6.3e-06 55.8 70 40.0
QL01p041898 Quercus lobata HOM05D000003 ORTHO05D000126 6.3e-06 55.8 74 36.5
SGA_v2.0_scaffold77G25249 Striga asiatica HOM05D017992 ORTHO05D000126 6.3e-06 55.8 39 51.3
CSS0004935 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 8.3e-06 55.5 70 41.4
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 8.3e-06 55.5 49 49.0
SGA_v2.0_scaffold232G43493 Striga asiatica HOM05D010621 ORTHO05D000126 8.3e-06 55.5 101 38.6


User provided reference genes

Program Settings