Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold332G48944 Striga asiatica HOM05D007421 ORTHO05D009203 5.8e-239 830.5 417 100.0
Migut.B00638 Erythranthe guttata HOM05D007421 ORTHO05D009203 2.6e-45 187.2 253 49.8
Oeu000232.1 Olea europaea HOM05D007421 ORTHO05D009203 2.2e-36 157.5 358 38.0
Cc02_g21850 Coffea canephora HOM05D007421 ORTHO05D009203 7.3e-24 115.9 374 33.2
Actinidia38971 Actinidia chinensis HOM05D003963 ORTHO05D004558 1.1e-22 112.1 299 34.8
Rhsim11G0134600 Rhododendron simsii HOM05D007421 ORTHO05D009203 1.1e-22 112.1 310 35.5
Actinidia00249 Actinidia chinensis HOM05D007421 ORTHO05D009203 9.9e-21 105.5 299 35.5
Nitab4.5_0011639g0020 Nicotiana tabacum HOM05D007421 ORTHO05D009203 1.9e-19 101.3 386 31.3
Nn5g28883 Nelumbo nucifera HOM05D007421 ORTHO05D009203 4.1e-19 100.1 299 31.4
CiPaw.06G151100 Carya illinoinensis HOM05D007421 ORTHO05D009203 1.6e-18 98.2 329 29.8
Dinv24220 Davidia involucrata HOM05D007421 ORTHO05D009203 2.1e-18 97.8 298 33.9
TAR628G0675 Trochodendron aralioides HOM05D007421 ORTHO05D009203 3.5e-18 97.1 297 31.6
Solyc10g047040.3 Solanum lycopersicum HOM05D007421 ORTHO05D009203 4.6e-18 96.7 370 30.5
Cfa005578 Carpinus fangiana HOM05D007421 ORTHO05D009203 7.8e-18 95.9 308 32.1
Sopen10g016990 Solanum pennellii HOM05D007421 ORTHO05D009203 1.0e-17 95.5 370 30.5
DCAR_029217 Daucus carota HOM05D007421 ORTHO05D009203 1.7e-17 94.7 343 29.4
CAN.G1034.36 Capsicum annuum HOM05D007421 ORTHO05D009203 1.9e-16 91.3 379 30.1
CSS0030012 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 1.2e-15 88.6 303 33.0
CSS0048527 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 1.2e-15 88.6 303 33.0
PGSC0003DMG400024171 Solanum tuberosum HOM05D007421 ORTHO05D009203 2.8e-15 87.4 371 29.9
ClCG09G021300 Citrullus lanatus HOM05D007421 ORTHO05D009203 4.7e-15 86.7 377 28.4
Nitab4.5_0004176g0040 Nicotiana tabacum HOM05D007421 ORTHO05D009203 1.8e-14 84.7 383 28.7
Nitab4.5_0000078g0170 Nicotiana tabacum HOM05D007421 ORTHO05D009203 2.4e-14 84.3 387 29.5
CsaV3_7G012710 Cucumis sativus L. HOM05D007421 ORTHO05D009203 3.1e-14 84.0 324 27.5
Sed0000945 Sechium edule HOM05D007421 ORTHO05D009203 4.4e-13 80.1 361 28.3
Aqoxy5G02013 Aquilegia oxysepala HOM05D007421 ORTHO05D009203 5.8e-13 79.7 321 30.2
vmacro01809 Vaccinium macrocarpon HOM05D007421 ORTHO05D009203 1.7e-12 78.2 317 31.9
Ca_18335_v3 Cicer arietinum L. HOM05D007421 ORTHO05D009203 2.2e-12 77.8 321 28.7
Haze_10776 Corylus avellana HOM05D007421 ORTHO05D009203 2.9e-12 77.4 308 29.5
Peaxi162Scf00003g03742 Petunia axillaris HOM05D007421 ORTHO05D009203 6.4e-12 76.3 354 26.8
Manes.11G148500 Manihot esculenta HOM05D007421 ORTHO05D009203 2.4e-11 74.3 290 32.8
Gorai.013G063400 Gossypium raimondii HOM05D007421 ORTHO05D009203 3.2e-11 73.9 289 28.7
Lj4g0022412 Lotus japonicus HOM05D007421 ORTHO05D009203 4.1e-11 73.6 322 30.7
TWI59G0537 Tripterygium wilfordii HOM05D007421 ORTHO05D009203 5.4e-11 73.2 324 31.2
Gohir.A13G065600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 9.2e-11 72.4 289 28.7
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 1.2e-10 72.0 330 27.3
Thecc.02G143500 Theobroma cacao HOM05D007421 ORTHO05D009203 4.6e-10 70.1 313 29.1
Sc08g0004770 Simmondsia chinensis HOM05D007421 ORTHO05D009203 1.3e-09 68.6 219 29.7
EL10Ac8g19356 Beta vulgaris HOM05D007421 ORTHO05D009203 2.3e-09 67.8 329 27.1
Gohir.A03G171600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 2.3e-09 67.8 380 27.1
TPR.G10446 Trifolium pratense HOM05D007421 ORTHO05D009203 2.3e-09 67.8 278 30.2
Gorai.005G217800 Gossypium raimondii HOM05D007421 ORTHO05D009203 3.0e-09 67.4 379 27.7
Haze_09992 Corylus avellana HOM05D003963 ORTHO05D004558 5.1e-09 66.6 185 33.5
Psat7g097480 Pisum sativum HOM05D007421 ORTHO05D009203 1.1e-08 65.5 281 28.8
Potri.005G176900 Populus trichocarpa HOM05D007421 ORTHO05D009203 4.3e-08 63.5 273 27.1
Sabra05G0133500 Salix brachista HOM05D007421 ORTHO05D009203 4.3e-08 63.5 287 26.5
Gohir.D02G194950 Gossypium hirsutum HOM05D007421 ORTHO05D009203 5.6e-08 63.2 346 27.5
Cpa.g.sc0.12 Carica papaya HOM05D007421 ORTHO05D009203 9.6e-08 62.4 339 29.5
VMungo0251G1640 Vigna mungo HOM05D007421 ORTHO05D009203 2.1e-07 61.2 359 26.7
HPP92_013365 Vanilla planifolia HOM05D007421 ORTHO05D009203 1.1e-06 58.9 320 29.4
Gohir.D13G056100 Gossypium hirsutum HOM05D007421 ORTHO05D009203 1.4e-06 58.5 244 27.9
Migut.B00639 Erythranthe guttata HOM05D007421 ORTHO05D009203 1.8e-06 58.2 70 50.0
RcHm_v2.0_Chr7g0225501 Rosa chinensis HOM05D007421 ORTHO05D009203 6.9e-06 56.2 143 36.4


User provided reference genes

Program Settings