Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10705 Striga asiatica HOM05D018457 ORTHO05D000045 1.7e-154 549.3 278 100.0
SGA_v2.0_scaffold32G13337 Striga asiatica HOM05D018457 ORTHO05D000045 1.7e-154 549.3 278 100.0
SGA_v2.0_scaffold4G02282 Striga asiatica HOM05D018457 ORTHO05D000045 1.3e-40 171.0 166 62.0
SGA_v2.0_scaffold160G37714 Striga asiatica HOM05D018457 ORTHO05D000045 1.2e-33 147.9 265 37.7
SGA_v2.0_scaffold75G24967 Striga asiatica HOM05D018457 ORTHO05D000045 2.3e-26 123.6 275 35.3
SGA_v2.0_scaffold33G13378 Striga asiatica HOM05D000096 ORTHO05D000045 7.0e-23 112.1 249 31.7
SGA_v2.0_scaffold1G00565 Striga asiatica HOM05D018457 ORTHO05D000045 3.5e-22 109.8 224 36.6
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 3.1e-18 96.7 316 25.6
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-17 94.4 226 30.1
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.4e-17 92.8 226 29.6
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.5e-17 92.0 299 27.1
SGA_v2.0_scaffold30G12441 Striga asiatica HOM05D000096 ORTHO05D000045 7.5e-17 92.0 258 29.1
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-16 89.4 67 53.7
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.4e-16 89.0 187 31.0
SGA_v2.0_scaffold87G27150 Striga asiatica HOM05D018457 ORTHO05D000045 6.4e-16 89.0 110 42.7
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 9.2e-15 85.1 64 54.7
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 3.5e-14 83.2 62 59.7
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.0e-13 80.1 179 26.8
Cc00_g07260 Coffea canephora HOM05D000096 ORTHO05D000045 1.9e-12 77.4 62 58.1
CiPaw.08G106200 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.1e-11 73.9 157 27.4
Cc03_g09110 Coffea canephora HOM05D000096 ORTHO05D000045 1.4e-10 71.2 63 49.2
Atru.chr4.2124 Acer truncatum HOM05D000096 ORTHO05D000045 2.0e-09 67.4 202 22.3
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 2.0e-09 67.4 61 41.0
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 5.8e-09 65.9 61 47.5
Atru.chr3.2970 Acer truncatum HOM05D000096 ORTHO05D000045 7.5e-09 65.5 202 22.3
SGA_v2.0_scaffold27G11560 Striga asiatica HOM05D000096 ORTHO05D000045 7.5e-09 65.5 61 49.2
CANSAT64G1628 Cannabis sativa HOM05D000096 ORTHO05D000045 9.8e-09 65.1 238 23.5
Oeu024349.1 Olea europaea HOM05D000096 ORTHO05D000045 9.8e-09 65.1 62 43.5
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 1.7e-08 64.3 67 41.8
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.2e-08 63.9 71 38.0
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.2e-08 63.9 71 38.0
CiPaw.13G069100 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.7e-08 63.2 71 38.0
Oeu005211.1 Olea europaea HOM05D000423 ORTHO05D000284 3.7e-08 63.2 66 40.9
CiPaw.01G296900 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.4e-08 62.4 71 38.0
CiPaw.09G160200 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.4e-08 62.4 71 38.0
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.4e-08 62.4 242 23.6
CiPaw.10G120300 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.4e-08 62.4 71 38.0
Atru.chr12.1652 Acer truncatum HOM05D000096 ORTHO05D000045 8.3e-08 62.0 67 35.8
CiPaw.01G147400 Carya illinoinensis HOM05D000096 ORTHO05D000045 8.3e-08 62.0 67 38.8
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 8.3e-08 62.0 65 41.5
EL10Ac2g03134 Beta vulgaris HOM05D000096 ORTHO05D000045 2.4e-07 60.5 162 24.1
EL10Ac8g20308 Beta vulgaris HOM05D000096 ORTHO05D000045 2.4e-07 60.5 183 27.3
Oeu014096.1 Olea europaea HOM05D000096 ORTHO05D000045 2.4e-07 60.5 67 41.8
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 3.2e-07 60.1 65 36.9
Oeu062429.1 Olea europaea HOM05D000096 ORTHO05D000045 4.1e-07 59.7 72 40.3
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 5.4e-07 59.3 67 40.3
Oeu014098.1 Olea europaea HOM05D000096 ORTHO05D000045 5.4e-07 59.3 67 40.3
Oeu039129.1 Olea europaea HOM05D000096 ORTHO05D000045 5.4e-07 59.3 67 40.3
Oeu050616.1 Olea europaea HOM05D000096 ORTHO05D000045 5.4e-07 59.3 59 42.4
Atru.chr2.1644 Acer truncatum HOM05D000096 ORTHO05D000045 7.1e-07 58.9 62 40.3
CANSAT64G1799 Cannabis sativa HOM05D000096 ORTHO05D000045 7.1e-07 58.9 62 45.2
Oeu024546.1 Olea europaea HOM05D000096 ORTHO05D000045 7.1e-07 58.9 59 44.1
EL10Ac5g11745 Beta vulgaris HOM05D000096 ORTHO05D000045 9.2e-07 58.5 67 40.3
EL10Ac6g13732 Beta vulgaris HOM05D000096 ORTHO05D000045 9.2e-07 58.5 198 22.7
EL10Ac8g19574 Beta vulgaris HOM05D000096 ORTHO05D000045 9.2e-07 58.5 198 22.7
EL10Ac8g20587 Beta vulgaris HOM05D000096 ORTHO05D000045 9.2e-07 58.5 198 22.7
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.2e-07 58.5 67 38.8
CiPaw.06G111300 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.2e-07 58.5 67 38.8
CiPaw.15G028600 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.2e-07 58.5 67 38.8
SGA_v2.0_scaffold260G45870 Striga asiatica HOM05D000096 ORTHO05D000045 1.2e-06 58.2 196 27.0
CiPaw.09G168700 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.6e-06 57.8 93 35.5
Oeu054130.1 Olea europaea HOM05D000096 ORTHO05D000045 1.6e-06 57.8 67 35.8
EL10Ac1g02310 Beta vulgaris HOM05D000096 ORTHO05D000045 2.1e-06 57.4 67 38.8
EL10Ac7g17443 Beta vulgaris HOM05D007854 ORTHO05D000045 2.1e-06 57.4 198 20.7
CiPaw.11G156500 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.1e-06 57.4 71 35.2
Oeu005870.1 Olea europaea HOM05D000096 ORTHO05D000045 2.1e-06 57.4 67 40.3
CAN.G273.19 Capsicum annuum HOM05D000096 ORTHO05D000045 2.7e-06 57.0 62 40.3
Oeu017669.1 Olea europaea HOM05D000096 ORTHO05D000045 3.5e-06 56.6 61 41.0
CANSAT56G4396 Cannabis sativa HOM05D000096 ORTHO05D000045 4.6e-06 56.2 67 35.8
Oeu017741.1 Olea europaea HOM05D000096 ORTHO05D000045 4.6e-06 56.2 80 35.0
EL10Ac4g07894 Beta vulgaris HOM05D000096 ORTHO05D000045 6.0e-06 55.8 190 23.2
EL10Ac8g19546 Beta vulgaris HOM05D000096 ORTHO05D000045 6.0e-06 55.8 67 38.8
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 6.0e-06 55.8 61 37.7
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 6.0e-06 55.8 67 35.8
CAN.G97.48 Capsicum annuum HOM05D000096 ORTHO05D000045 6.0e-06 55.8 59 40.7
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 7.8e-06 55.5 68 39.7
Oeu037905.1 Olea europaea HOM05D000096 ORTHO05D000045 7.8e-06 55.5 61 41.0
Oeu046629.1 Olea europaea HOM05D000096 ORTHO05D000045 7.8e-06 55.5 59 40.7
Oeu057797.1 Olea europaea HOM05D000096 ORTHO05D000045 7.8e-06 55.5 67 38.8


User provided reference genes

Program Settings