Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 2.7e-129 465.3 233 100.0
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 3.6e-129 464.9 233 99.6
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 1.2e-127 459.9 233 98.7
SGA_v2.0_scaffold4G02280 Striga asiatica HOM05D021043 ORTHO05D009014 4.3e-106 388.3 232 87.1
SGA_v2.0_scaffold46G17409 Striga asiatica HOM05D021043 ORTHO05D399715 4.0e-72 275.4 170 84.7
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 4.3e-42 175.6 224 43.8
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 2.0e-31 140.2 185 42.7
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-27 127.9 183 37.7
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 7.4e-26 121.7 146 39.0
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-24 117.9 82 64.6
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-24 116.7 132 45.5
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-22 109.8 211 33.6
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 3.8e-22 109.4 256 31.6
SGA_v2.0_scaffold106G30692 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-20 104.0 108 46.3
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-20 102.4 210 32.4
Cc08_g06650 Coffea canephora HOM05D006612 ORTHO05D009014 3.9e-19 99.4 247 28.3
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 3.3e-18 96.3 199 33.7
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-15 87.8 282 25.9
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-15 87.0 135 34.8
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-15 87.0 135 34.8
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 5.9e-15 85.5 156 30.1
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 1.3e-14 84.3 190 29.5
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 2.2e-14 83.6 219 26.0
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-14 83.6 178 25.8
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-13 81.3 153 27.5
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 3.2e-13 79.7 217 28.1
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-12 77.0 102 41.2
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.7e-12 75.9 94 43.6
SGA_v2.0_scaffold1G00564 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-12 75.9 138 36.2
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 6.1e-12 75.5 232 25.4
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-11 74.7 228 23.2
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-11 73.9 228 23.2
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-11 73.9 236 24.2
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-11 73.9 236 24.2
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-11 73.2 209 25.8
SGA_v2.0_scaffold43G16209 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-11 72.0 219 24.2
Cc08_g02920 Coffea canephora HOM05D006612 ORTHO05D009014 2.8e-09 66.6 56 44.6
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 6.3e-09 65.5 85 36.5
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 8.2e-09 65.1 237 21.9
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-08 64.7 86 32.6
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-08 64.3 89 34.8
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-08 63.5 234 23.5
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 5.3e-08 62.4 219 22.4
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-07 60.1 191 22.5
SGA_v2.0_scaffold33G13376 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-06 56.2 60 43.3
Cc01_g08090 Coffea canephora HOM05D017605 ORTHO05D025121 5.0e-06 55.8 188 29.8
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 5.0e-06 55.8 168 29.2


User provided reference genes

Program Settings