Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 1.9e-71 272.3 131 100.0
SGA_v2.0_scaffold58G20343 Striga asiatica HOM05D007970 ORTHO05D009943 2.8e-22 109.0 93 64.5
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 3.2e-18 95.5 102 52.9
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 7.1e-18 94.4 95 54.7
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 1.6e-17 93.2 79 60.8
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 4.6e-17 91.7 110 45.5
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 1.0e-16 90.5 97 48.5
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 1.3e-16 90.1 85 57.6
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 2.3e-16 89.4 96 46.9
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 3.0e-16 89.0 108 44.4
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 3.9e-16 88.6 103 46.6
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 6.7e-16 87.8 112 46.4
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 6.7e-16 87.8 112 46.4
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 5.7e-15 84.7 101 47.5
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 2.1e-14 82.8 95 48.4
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 2.8e-14 82.4 83 53.0
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 3.7e-14 82.0 100 48.0
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 4.8e-14 81.6 90 50.0
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 8.2e-14 80.9 94 44.7
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.8e-13 79.7 112 42.9
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.4e-13 79.3 109 43.1
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.4e-13 79.3 109 43.1
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 2.4e-13 79.3 108 39.8
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 3.1e-13 79.0 97 47.4
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 5.3e-13 78.2 110 41.8
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 6.9e-13 77.8 110 41.8
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 9.0e-13 77.4 95 43.2
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 9.0e-13 77.4 108 40.7
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 2.0e-12 76.3 84 47.6
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 2.0e-12 76.3 120 40.8
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 2.6e-12 75.9 93 41.9
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 3.4e-12 75.5 106 40.6
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 7.6e-12 74.3 82 45.1
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 1.7e-11 73.2 103 39.8
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 2.9e-11 72.4 87 47.1
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 5.0e-11 71.6 115 40.9
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 5.0e-11 71.6 94 46.8
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 6.5e-11 71.2 97 42.3
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 1.1e-10 70.5 117 41.0
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 1.1e-10 70.5 108 38.0
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 2.5e-10 69.3 104 42.3
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 4.2e-10 68.6 48 62.5
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 5.5e-10 68.2 102 41.2
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 5.5e-10 68.2 101 42.6
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 2.1e-09 66.2 73 46.6
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 3.5e-09 65.5 110 39.1
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 3.5e-09 65.5 98 44.9
Nitab4.5_0000079g0240 Nicotiana tabacum HOM05D007970 ORTHO05D009943 6.1e-09 64.7 47 63.8
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 6.1e-09 64.7 47 61.7
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 7.9e-09 64.3 90 43.3
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 1.3e-08 63.5 106 37.7
COL.COLO4_29613 Corchorus olitorius HOM05D006872 ORTHO05D006261 5.1e-08 61.6 77 41.6
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 6.7e-08 61.2 113 35.4
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 8.7e-08 60.8 104 34.6
Gohir.A01G202400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 1.1e-07 60.5 83 39.8
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 1.5e-07 60.1 102 40.2
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 1.5e-07 60.1 58 51.7
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 1.5e-07 60.1 113 35.4
Gohir.D01G192400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 1.9e-07 59.7 101 34.7
Thecc.05G100900 Theobroma cacao HOM05D006872 ORTHO05D006261 2.5e-07 59.3 77 40.3
Aqoxy4G02683 Aquilegia oxysepala HOM05D006872 ORTHO05D006261 3.3e-07 58.9 94 39.4
Glyma.03G200500 Glycine max HOM05D006872 ORTHO05D006261 3.3e-07 58.9 80 40.0
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 4.3e-07 58.5 106 34.0
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 4.3e-07 58.5 96 38.5
Sed0018559 Sechium edule HOM05D006872 ORTHO05D006261 4.3e-07 58.5 97 34.0
Glyma.19G198100 Glycine max HOM05D006872 ORTHO05D006261 5.7e-07 58.2 80 40.0
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 5.7e-07 58.2 84 38.1
Actinidia07935 Actinidia chinensis HOM05D006872 ORTHO05D006261 7.4e-07 57.8 90 41.1
CANSAT64G1977 Cannabis sativa HOM05D006872 ORTHO05D006261 7.4e-07 57.8 115 35.7
Gorai.002G236200 Gossypium raimondii HOM05D006872 ORTHO05D006261 7.4e-07 57.8 78 39.7
Hma1.2p1_1442F.1_g283790 Hydrangea macrophylla HOM05D006872 ORTHO05D006261 7.4e-07 57.8 70 44.3
SEGI_37168 Sequoiadendron giganteum HOM05D007970 ORTHO05D009943 9.7e-07 57.4 75 41.3
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.3e-06 57.0 124 30.6
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 1.3e-06 57.0 84 38.1
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 1.3e-06 57.0 57 50.9
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 1.3e-06 57.0 96 37.5
CiPaw.10G015400 Carya illinoinensis HOM05D006872 ORTHO05D006261 1.6e-06 56.6 67 44.8
MD12G1037000 Malus domestica HOM05D006872 ORTHO05D006261 1.6e-06 56.6 87 43.7
Psat3g030200 Pisum sativum HOM05D006872 ORTHO05D006261 2.2e-06 56.2 72 45.8
HanXRQChr13g0398221 Helianthus annuus HOM05D006872 ORTHO05D006261 2.8e-06 55.8 63 42.9
MD14G1036000 Malus domestica HOM05D006872 ORTHO05D006261 2.8e-06 55.8 76 43.4
SalBow5G3820 Salvia bowleyana HOM05D006872 ORTHO05D006261 2.8e-06 55.8 62 40.3
Zm00001eb407090 Zea mays HOM05D022723 ORTHO05D026008 2.8e-06 55.8 81 44.4
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 3.7e-06 55.5 51 51.0
Manes.08G031500 Manihot esculenta HOM05D006872 ORTHO05D006261 3.7e-06 55.5 115 30.4
FvH4_6g19940 Fragaria vesca HOM05D006872 ORTHO05D006261 4.8e-06 55.1 82 41.5
FAN05G2500 Fragaria x ananassa HOM05D006872 ORTHO05D006261 4.8e-06 55.1 82 41.5
FAN05G3358 Fragaria x ananassa HOM05D006872 ORTHO05D006261 4.8e-06 55.1 82 41.5
FAN14G4576 Fragaria x ananassa HOM05D006872 ORTHO05D006261 4.8e-06 55.1 82 41.5
MBI01_g17601_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 4.8e-06 55.1 110 36.4
Solyc01g007770.2 Solanum lycopersicum HOM05D006872 ORTHO05D006261 4.8e-06 55.1 58 50.0
Sopen01g003310 Solanum pennellii HOM05D006872 ORTHO05D006261 4.8e-06 55.1 58 50.0
HPP92_009040 Vanilla planifolia HOM05D022723 ORTHO05D026008 4.8e-06 55.1 92 44.6
Duzib128G0031 Durio zibethinus HOM05D006872 ORTHO05D006261 6.3e-06 54.7 77 37.7
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 6.3e-06 54.7 108 32.4
Nitab4.5_0011425g0030 Nicotiana tabacum HOM05D006872 ORTHO05D006261 6.3e-06 54.7 58 48.3
MELO3C009518.2 Cucumis melo HOM05D006872 ORTHO05D006261 8.2e-06 54.3 87 36.8
Nitab4.5_0000020g0340 Nicotiana tabacum HOM05D006872 ORTHO05D006261 8.2e-06 54.3 58 48.3
SalBow6G0243 Salvia bowleyana HOM05D006872 ORTHO05D006261 8.2e-06 54.3 62 41.9


User provided reference genes

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