Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13304 Striga asiatica HOM05D028864 ORTHO05D009044 1.0e-295 1019.2 485 100.0
SGA_v2.0_scaffold32G13300 Striga asiatica HOM05D028864 ORTHO05D009044 4.0e-159 565.5 499 62.9
SGA_v2.0_scaffold32G13296 Striga asiatica HOM05D028864 ORTHO05D009044 1.8e-154 550.1 491 60.9
SGA_v2.0_scaffold58G20348 Striga asiatica HOM05D028864 ORTHO05D009044 4.5e-33 146.7 202 46.5
FvH4_4g02090 Fragaria vesca HOM05D007346 ORTHO05D009044 1.4e-23 115.2 464 25.2
Duzib132G1061 Durio zibethinus HOM05D007346 ORTHO05D009044 2.5e-23 114.4 481 24.7
Cfa005279 Carpinus fangiana HOM05D007346 ORTHO05D009044 3.6e-22 110.5 452 25.7
FvH4_2g04880 Fragaria vesca HOM05D007346 ORTHO05D009044 3.6e-22 110.5 510 24.7
FAN24G1006 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.6e-22 110.5 511 24.7
FAN20G2910 Fragaria x ananassa HOM05D007346 ORTHO05D009044 4.7e-22 110.2 467 25.9
FvH4_4g01970 Fragaria vesca HOM05D007346 ORTHO05D009044 1.4e-21 108.6 489 25.4
RcHm_v2.0_Chr6g0254551 Rosa chinensis HOM05D007346 ORTHO05D009044 3.9e-21 107.1 519 25.2
Prupe.8G152400 Prunus persica HOM05D007346 ORTHO05D009044 5.1e-21 106.7 488 24.4
FAN12G0105 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.6e-20 104.4 492 24.6
FvH4_4g02080 Fragaria vesca HOM05D007346 ORTHO05D009044 1.7e-19 101.7 478 24.9
RcHm_v2.0_Chr5g0063131 Rosa chinensis HOM05D007346 ORTHO05D009044 2.8e-19 100.9 514 24.3
FAN12G2737 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.8e-18 98.2 329 29.8
Prupe.8G151600 Prunus persica HOM05D007346 ORTHO05D009044 2.4e-18 97.8 496 24.2
FvH4_4g01590 Fragaria vesca HOM05D007346 ORTHO05D009044 9.1e-18 95.9 329 29.8
Cfa005278 Carpinus fangiana HOM05D007346 ORTHO05D009044 5.9e-17 93.2 324 29.3
FAN25G0093 Fragaria x ananassa HOM05D007346 ORTHO05D009044 5.9e-17 93.2 228 33.8
RcHm_v2.0_Chr6g0254631 Rosa chinensis HOM05D007346 ORTHO05D009044 2.9e-16 90.9 245 28.6
FAN21G1548 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.5e-15 87.8 230 31.7
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 4.2e-15 87.0 415 23.6
Sabra03G0128000 Salix brachista HOM05D015619 ORTHO05D009044 4.2e-15 87.0 433 23.6
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.4e-15 85.9 228 32.0
Cfa012527 Carpinus fangiana HOM05D007346 ORTHO05D009044 6.1e-14 83.2 480 23.1
Duzib116G0495 Durio zibethinus HOM05D000151 ORTHO05D000074 1.0e-13 82.4 417 25.2
Manes.05G141800 Manihot esculenta HOM05D000151 ORTHO05D000074 1.8e-13 81.6 422 22.5
RcHm_v2.0_Chr6g0247891 Rosa chinensis HOM05D007346 ORTHO05D009044 2.3e-13 81.3 503 21.7
Thecc.08G054100 Theobroma cacao HOM05D000151 ORTHO05D000074 3.0e-13 80.9 420 23.6
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.0e-13 80.9 225 29.8
TAR626G0415 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.0e-13 80.9 225 29.8
RcHm_v2.0_Chr4g0388171 Rosa chinensis HOM05D007346 ORTHO05D009044 3.9e-13 80.5 526 22.4
RcHm_v2.0_Chr4g0393001 Rosa chinensis HOM05D007346 ORTHO05D009044 3.9e-13 80.5 316 27.8
RcHm_v2.0_Chr4g0393391 Rosa chinensis HOM05D007346 ORTHO05D009044 3.9e-13 80.5 316 26.9
Duzib248G1625 Durio zibethinus HOM05D007346 ORTHO05D009044 4.4e-12 77.0 445 23.4
MD08G1006100 Malus domestica HOM05D000151 ORTHO05D000074 7.4e-12 76.3 445 23.8
COL.COLO4_26063 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.3e-11 75.5 371 24.8
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 4.8e-11 73.6 419 23.6
FAN15G1755 Fragaria x ananassa HOM05D007346 ORTHO05D009044 8.2e-11 72.8 507 23.7
Aqoxy5G02613 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.1e-10 72.4 245 29.4
FvH4_2g03062 Fragaria vesca HOM05D007346 ORTHO05D009044 1.8e-10 71.6 234 27.4
FvH4_2g16550 Fragaria vesca HOM05D007346 ORTHO05D009044 5.3e-10 70.1 474 22.8
FAN24G2319 Fragaria x ananassa HOM05D007346 ORTHO05D009044 5.3e-10 70.1 234 27.4
RcHm_v2.0_Chr4g0393471 Rosa chinensis HOM05D007346 ORTHO05D009044 5.3e-10 70.1 306 26.5
PGSC0003DMG400046724 Solanum tuberosum HOM05D034039 ORTHO05D009044 5.3e-10 70.1 498 22.9
FvH4_2g04271 Fragaria vesca HOM05D007346 ORTHO05D009044 7.0e-10 69.7 494 23.5
FvH4_2g03731 Fragaria vesca HOM05D007346 ORTHO05D009044 1.6e-09 68.6 478 22.4
FAN15G1511 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.6e-09 68.6 490 23.1
Sabra01G0038800 Salix brachista HOM05D015619 ORTHO05D009044 1.6e-09 68.6 191 29.8
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.5e-09 67.0 414 24.4
TAR626G1895 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-08 65.9 464 24.4
CAN.G1298.26 Capsicum annuum HOM05D034039 ORTHO05D009044 1.7e-08 65.1 240 26.2
RcHm_v2.0_Chr6g0303821 Rosa chinensis HOM05D000151 ORTHO05D000074 1.7e-08 65.1 414 24.2
Atru.chr13.193 Acer truncatum HOM05D000151 ORTHO05D000074 2.2e-08 64.7 238 24.8
FvH4_4g01551 Fragaria vesca HOM05D007346 ORTHO05D009044 3.8e-08 63.9 243 28.0
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 8.5e-08 62.8 240 27.9
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.5e-08 62.8 240 27.9
FAN17G1827 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.5e-08 62.8 233 27.5
Potri.001G054200 Populus trichocarpa HOM05D015619 ORTHO05D009044 8.5e-08 62.8 191 29.3
PGSC0003DMG400030538 Solanum tuberosum HOM05D034039 ORTHO05D009044 8.5e-08 62.8 142 31.7
FAN17G3078 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.1e-07 62.4 418 23.0
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 4.2e-07 60.5 432 21.3
Sabra15G0099200 Salix brachista HOM05D015619 ORTHO05D009044 9.4e-07 59.3 191 28.8
Sabra15G0099600 Salix brachista HOM05D015619 ORTHO05D009044 9.4e-07 59.3 191 28.8
Sabra15G0099900 Salix brachista HOM05D015619 ORTHO05D009044 9.4e-07 59.3 191 28.8
Sabra15G0100200 Salix brachista HOM05D015619 ORTHO05D009044 9.4e-07 59.3 191 28.8
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 1.2e-06 58.9 191 28.3
Os08g0164100 Oryza sativa ssp. japonica HOM05D000151 ORTHO05D000074 4.7e-06 57.0 133 30.8
Cfa014025 Carpinus fangiana HOM05D000151 ORTHO05D000074 8.0e-06 56.2 364 22.5
FAN24G2850 Fragaria x ananassa HOM05D007346 ORTHO05D009044 8.0e-06 56.2 142 33.8


User provided reference genes

Program Settings